Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22120 and ABID97_RS22125 are separated by 1 nucleotides ABID97_RS22125 and ABID97_RS22130 are separated by 175 nucleotides
ABID97_RS22120: ABID97_RS22120 - xanthine dehydrogenase molybdopterin binding subunit, at 4,578,488 to 4,580,938
_RS22120
ABID97_RS22125: ABID97_RS22125 - xanthine dehydrogenase small subunit, at 4,580,940 to 4,582,583
_RS22125
ABID97_RS22130: ABID97_RS22130 - divalent metal cation transporter, at 4,582,759 to 4,584,012
_RS22130
Position (kb) 4580
4581
4582
4583 Strain fitness (log2 ratio) -1
0
1 at 4579.947 kb on + strand, within ABID97_RS22120 at 4579.947 kb on + strand, within ABID97_RS22120 at 4580.232 kb on + strand, within ABID97_RS22120 at 4580.232 kb on + strand, within ABID97_RS22120 at 4580.757 kb on + strand at 4580.758 kb on - strand at 4580.758 kb on - strand at 4580.758 kb on - strand at 4580.758 kb on - strand at 4581.427 kb on + strand, within ABID97_RS22125 at 4581.427 kb on + strand, within ABID97_RS22125 at 4581.428 kb on - strand, within ABID97_RS22125 at 4581.436 kb on + strand, within ABID97_RS22125 at 4581.436 kb on + strand, within ABID97_RS22125 at 4581.436 kb on + strand, within ABID97_RS22125 at 4581.436 kb on + strand, within ABID97_RS22125 at 4581.603 kb on + strand, within ABID97_RS22125 at 4581.604 kb on - strand, within ABID97_RS22125 at 4581.742 kb on + strand, within ABID97_RS22125 at 4581.742 kb on + strand, within ABID97_RS22125 at 4581.742 kb on + strand, within ABID97_RS22125 at 4581.742 kb on + strand, within ABID97_RS22125 at 4581.743 kb on - strand, within ABID97_RS22125 at 4581.743 kb on - strand, within ABID97_RS22125 at 4581.743 kb on - strand, within ABID97_RS22125 at 4582.022 kb on - strand, within ABID97_RS22125 at 4582.109 kb on - strand, within ABID97_RS22125 at 4582.864 kb on + strand at 4582.864 kb on + strand at 4582.864 kb on + strand at 4582.943 kb on + strand, within ABID97_RS22130 at 4583.019 kb on - strand, within ABID97_RS22130 at 4583.088 kb on - strand, within ABID97_RS22130 at 4583.550 kb on - strand, within ABID97_RS22130
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 4,579,947 + ABID97_RS22120 0.60 -0.7 4,579,947 + ABID97_RS22120 0.60 -0.4 4,580,232 + ABID97_RS22120 0.71 -0.4 4,580,232 + ABID97_RS22120 0.71 -0.2 4,580,757 + -0.4 4,580,758 - +1.1 4,580,758 - -0.0 4,580,758 - -0.3 4,580,758 - -0.2 4,581,427 + ABID97_RS22125 0.30 -0.3 4,581,427 + ABID97_RS22125 0.30 -0.6 4,581,428 - ABID97_RS22125 0.30 +0.4 4,581,436 + ABID97_RS22125 0.30 -0.3 4,581,436 + ABID97_RS22125 0.30 -0.1 4,581,436 + ABID97_RS22125 0.30 +0.2 4,581,436 + ABID97_RS22125 0.30 -0.9 4,581,603 + ABID97_RS22125 0.40 -0.6 4,581,604 - ABID97_RS22125 0.40 -0.3 4,581,742 + ABID97_RS22125 0.49 -0.7 4,581,742 + ABID97_RS22125 0.49 +0.1 4,581,742 + ABID97_RS22125 0.49 -0.1 4,581,742 + ABID97_RS22125 0.49 -0.2 4,581,743 - ABID97_RS22125 0.49 -0.7 4,581,743 - ABID97_RS22125 0.49 -0.4 4,581,743 - ABID97_RS22125 0.49 -0.7 4,582,022 - ABID97_RS22125 0.66 +0.6 4,582,109 - ABID97_RS22125 0.71 +0.6 4,582,864 + +0.5 4,582,864 + +0.1 4,582,864 + +0.2 4,582,943 + ABID97_RS22130 0.15 -0.7 4,583,019 - ABID97_RS22130 0.21 +0.2 4,583,088 - ABID97_RS22130 0.26 +0.3 4,583,550 - ABID97_RS22130 0.63 -0.9
Or see this region's nucleotide sequence