Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21710 and ABID97_RS21715 are separated by 116 nucleotides ABID97_RS21715 and ABID97_RS21720 are separated by 16 nucleotides ABID97_RS21720 and ABID97_RS21725 are separated by 44 nucleotides
ABID97_RS21710: ABID97_RS21710 - aldo/keto reductase, at 4,488,227 to 4,489,288
_RS21710
ABID97_RS21715: ABID97_RS21715 - alpha/beta hydrolase, at 4,489,405 to 4,490,334
_RS21715
ABID97_RS21720: ABID97_RS21720 - amino acid racemase, at 4,490,351 to 4,491,058
_RS21720
ABID97_RS21725: ABID97_RS21725 - aldo/keto reductase, at 4,491,103 to 4,492,116
_RS21725
Position (kb) 4489
4490
4491 Strain fitness (log2 ratio) -1
0
1 at 4488.439 kb on - strand, within ABID97_RS21710 at 4488.498 kb on + strand, within ABID97_RS21710 at 4488.499 kb on - strand, within ABID97_RS21710 at 4488.499 kb on - strand, within ABID97_RS21710 at 4488.499 kb on - strand, within ABID97_RS21710 at 4488.555 kb on + strand, within ABID97_RS21710 at 4488.555 kb on + strand, within ABID97_RS21710 at 4488.666 kb on + strand, within ABID97_RS21710 at 4488.667 kb on - strand, within ABID97_RS21710 at 4488.667 kb on - strand, within ABID97_RS21710 at 4488.667 kb on - strand, within ABID97_RS21710 at 4488.853 kb on - strand, within ABID97_RS21710 at 4488.853 kb on - strand, within ABID97_RS21710 at 4488.855 kb on + strand, within ABID97_RS21710 at 4488.855 kb on + strand, within ABID97_RS21710 at 4488.855 kb on + strand, within ABID97_RS21710 at 4488.855 kb on + strand, within ABID97_RS21710 at 4488.855 kb on + strand, within ABID97_RS21710 at 4488.855 kb on + strand, within ABID97_RS21710 at 4488.856 kb on - strand, within ABID97_RS21710 at 4488.856 kb on - strand, within ABID97_RS21710 at 4488.856 kb on - strand, within ABID97_RS21710 at 4488.856 kb on - strand, within ABID97_RS21710 at 4489.131 kb on + strand, within ABID97_RS21710 at 4489.131 kb on + strand, within ABID97_RS21710 at 4489.131 kb on + strand, within ABID97_RS21710 at 4489.132 kb on - strand, within ABID97_RS21710 at 4489.132 kb on - strand, within ABID97_RS21710 at 4489.132 kb on - strand, within ABID97_RS21710 at 4489.391 kb on + strand at 4489.408 kb on + strand at 4489.408 kb on + strand at 4489.408 kb on + strand at 4489.408 kb on + strand at 4489.409 kb on - strand at 4489.409 kb on - strand at 4489.409 kb on - strand at 4489.409 kb on - strand at 4489.462 kb on + strand at 4489.463 kb on - strand at 4489.463 kb on - strand at 4489.463 kb on - strand at 4489.642 kb on + strand, within ABID97_RS21715 at 4489.643 kb on - strand, within ABID97_RS21715 at 4489.643 kb on - strand, within ABID97_RS21715 at 4489.657 kb on + strand, within ABID97_RS21715 at 4489.658 kb on - strand, within ABID97_RS21715 at 4489.690 kb on + strand, within ABID97_RS21715 at 4489.918 kb on + strand, within ABID97_RS21715 at 4490.119 kb on + strand, within ABID97_RS21715 at 4490.119 kb on + strand, within ABID97_RS21715 at 4490.625 kb on + strand, within ABID97_RS21720 at 4490.626 kb on - strand, within ABID97_RS21720 at 4490.626 kb on - strand, within ABID97_RS21720 at 4490.658 kb on + strand, within ABID97_RS21720 at 4490.659 kb on - strand, within ABID97_RS21720 at 4490.901 kb on + strand, within ABID97_RS21720 at 4490.902 kb on - strand, within ABID97_RS21720 at 4490.902 kb on - strand, within ABID97_RS21720 at 4490.916 kb on + strand, within ABID97_RS21720 at 4490.917 kb on - strand, within ABID97_RS21720 at 4490.917 kb on - strand, within ABID97_RS21720 at 4491.068 kb on + strand at 4491.069 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 4,488,439 - ABID97_RS21710 0.20 -0.2 4,488,498 + ABID97_RS21710 0.26 +0.3 4,488,499 - ABID97_RS21710 0.26 -0.1 4,488,499 - ABID97_RS21710 0.26 -0.6 4,488,499 - ABID97_RS21710 0.26 +0.4 4,488,555 + ABID97_RS21710 0.31 -0.1 4,488,555 + ABID97_RS21710 0.31 -0.6 4,488,666 + ABID97_RS21710 0.41 -0.2 4,488,667 - ABID97_RS21710 0.41 -0.0 4,488,667 - ABID97_RS21710 0.41 -0.3 4,488,667 - ABID97_RS21710 0.41 -0.3 4,488,853 - ABID97_RS21710 0.59 -0.4 4,488,853 - ABID97_RS21710 0.59 +0.1 4,488,855 + ABID97_RS21710 0.59 +0.8 4,488,855 + ABID97_RS21710 0.59 +0.2 4,488,855 + ABID97_RS21710 0.59 -0.7 4,488,855 + ABID97_RS21710 0.59 -0.8 4,488,855 + ABID97_RS21710 0.59 -0.4 4,488,855 + ABID97_RS21710 0.59 +0.1 4,488,856 - ABID97_RS21710 0.59 -0.2 4,488,856 - ABID97_RS21710 0.59 -0.2 4,488,856 - ABID97_RS21710 0.59 -0.6 4,488,856 - ABID97_RS21710 0.59 +0.6 4,489,131 + ABID97_RS21710 0.85 +0.1 4,489,131 + ABID97_RS21710 0.85 -0.5 4,489,131 + ABID97_RS21710 0.85 -0.7 4,489,132 - ABID97_RS21710 0.85 +0.1 4,489,132 - ABID97_RS21710 0.85 -0.1 4,489,132 - ABID97_RS21710 0.85 -0.4 4,489,391 + -0.4 4,489,408 + +0.1 4,489,408 + +0.5 4,489,408 + -0.3 4,489,408 + -0.3 4,489,409 - +0.1 4,489,409 - -0.9 4,489,409 - -0.3 4,489,409 - -1.7 4,489,462 + +0.0 4,489,463 - -1.3 4,489,463 - -1.0 4,489,463 - -0.0 4,489,642 + ABID97_RS21715 0.25 -0.7 4,489,643 - ABID97_RS21715 0.26 +0.2 4,489,643 - ABID97_RS21715 0.26 -0.8 4,489,657 + ABID97_RS21715 0.27 -0.6 4,489,658 - ABID97_RS21715 0.27 +0.6 4,489,690 + ABID97_RS21715 0.31 -1.2 4,489,918 + ABID97_RS21715 0.55 -0.5 4,490,119 + ABID97_RS21715 0.77 -0.3 4,490,119 + ABID97_RS21715 0.77 -0.4 4,490,625 + ABID97_RS21720 0.39 -0.3 4,490,626 - ABID97_RS21720 0.39 -0.2 4,490,626 - ABID97_RS21720 0.39 -0.9 4,490,658 + ABID97_RS21720 0.43 -0.3 4,490,659 - ABID97_RS21720 0.44 +0.0 4,490,901 + ABID97_RS21720 0.78 +0.1 4,490,902 - ABID97_RS21720 0.78 -0.2 4,490,902 - ABID97_RS21720 0.78 +0.1 4,490,916 + ABID97_RS21720 0.80 -0.3 4,490,917 - ABID97_RS21720 0.80 -0.1 4,490,917 - ABID97_RS21720 0.80 -0.4 4,491,068 + -0.3 4,491,069 - +0.5
Or see this region's nucleotide sequence