Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24690 and IAI46_24695 overlap by 1 nucleotides IAI46_24695 and IAI46_24700 are separated by 59 nucleotides IAI46_24700 and IAI46_24705 are separated by 28 nucleotides IAI46_24705 and IAI46_24710 are separated by 298 nucleotides
IAI46_24690: IAI46_24690 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 5,270,758 to 5,271,777
_24690
IAI46_24695: IAI46_24695 - protein-export chaperone SecB, at 5,271,777 to 5,272,247
_24695
IAI46_24700: IAI46_24700 - glutaredoxin 3, at 5,272,307 to 5,272,555
_24700
IAI46_24705: IAI46_24705 - rhodanese-like domain-containing protein, at 5,272,584 to 5,273,018
_24705
IAI46_24710: IAI46_24710 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 5,273,317 to 5,274,861
_24710
Position (kb) 5272
5273 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5271.502 kb on + strand, within IAI46_24690 at 5271.502 kb on + strand, within IAI46_24690 at 5271.517 kb on + strand, within IAI46_24690 at 5271.517 kb on + strand, within IAI46_24690 at 5271.517 kb on + strand, within IAI46_24690 at 5271.517 kb on + strand, within IAI46_24690 at 5271.712 kb on - strand at 5271.714 kb on + strand at 5271.714 kb on + strand at 5271.715 kb on - strand at 5271.718 kb on + strand at 5271.718 kb on + strand at 5271.718 kb on + strand at 5271.718 kb on + strand at 5271.829 kb on + strand, within IAI46_24695 at 5271.829 kb on + strand, within IAI46_24695 at 5271.830 kb on - strand, within IAI46_24695 at 5271.830 kb on - strand, within IAI46_24695 at 5271.885 kb on - strand, within IAI46_24695 at 5271.947 kb on - strand, within IAI46_24695 at 5272.071 kb on + strand, within IAI46_24695 at 5272.072 kb on - strand, within IAI46_24695 at 5272.081 kb on + strand, within IAI46_24695 at 5272.081 kb on + strand, within IAI46_24695 at 5272.082 kb on - strand, within IAI46_24695 at 5272.082 kb on - strand, within IAI46_24695 at 5272.112 kb on + strand, within IAI46_24695 at 5272.113 kb on - strand, within IAI46_24695 at 5272.116 kb on + strand, within IAI46_24695 at 5272.116 kb on + strand, within IAI46_24695 at 5272.116 kb on + strand, within IAI46_24695 at 5272.117 kb on - strand, within IAI46_24695 at 5272.117 kb on - strand, within IAI46_24695 at 5272.117 kb on - strand, within IAI46_24695 at 5272.127 kb on + strand, within IAI46_24695 at 5272.187 kb on + strand, within IAI46_24695 at 5272.187 kb on + strand, within IAI46_24695 at 5272.187 kb on + strand, within IAI46_24695 at 5272.187 kb on + strand, within IAI46_24695 at 5272.188 kb on - strand, within IAI46_24695 at 5272.188 kb on - strand, within IAI46_24695 at 5272.188 kb on - strand, within IAI46_24695 at 5272.188 kb on - strand, within IAI46_24695 at 5272.189 kb on + strand, within IAI46_24695 at 5272.198 kb on + strand, within IAI46_24695 at 5272.199 kb on - strand, within IAI46_24695 at 5272.199 kb on - strand, within IAI46_24695 at 5272.199 kb on - strand, within IAI46_24695 at 5272.253 kb on + strand at 5272.253 kb on + strand at 5272.253 kb on + strand at 5272.253 kb on + strand at 5272.254 kb on - strand at 5272.254 kb on - strand at 5272.257 kb on - strand at 5272.257 kb on - strand at 5272.257 kb on - strand at 5272.257 kb on - strand at 5272.257 kb on - strand at 5272.266 kb on + strand at 5272.276 kb on + strand at 5272.277 kb on - strand at 5272.277 kb on - strand at 5272.308 kb on + strand at 5272.348 kb on - strand, within IAI46_24700 at 5272.349 kb on + strand, within IAI46_24700 at 5272.369 kb on + strand, within IAI46_24700 at 5272.536 kb on + strand at 5272.536 kb on + strand at 5272.536 kb on + strand at 5272.536 kb on + strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.540 kb on + strand at 5272.540 kb on + strand at 5272.540 kb on + strand at 5272.549 kb on + strand at 5272.549 kb on + strand at 5272.560 kb on + strand at 5272.561 kb on - strand at 5272.561 kb on - strand at 5272.561 kb on - strand at 5272.572 kb on + strand at 5272.572 kb on + strand at 5272.573 kb on - strand at 5272.578 kb on - strand at 5272.585 kb on + strand at 5272.585 kb on + strand at 5272.585 kb on + strand at 5272.586 kb on - strand at 5272.586 kb on - strand at 5272.646 kb on + strand, within IAI46_24705 at 5272.646 kb on + strand, within IAI46_24705 at 5272.646 kb on + strand, within IAI46_24705 at 5272.646 kb on + strand, within IAI46_24705 at 5272.869 kb on - strand, within IAI46_24705 at 5272.977 kb on + strand at 5272.978 kb on - strand at 5272.978 kb on - strand at 5272.992 kb on - strand at 5273.025 kb on + strand at 5273.025 kb on + strand at 5273.025 kb on + strand at 5273.025 kb on + strand at 5273.026 kb on - strand at 5273.026 kb on - strand at 5273.072 kb on + strand at 5273.073 kb on - strand at 5273.073 kb on - strand at 5273.073 kb on - strand at 5273.074 kb on + strand at 5273.074 kb on + strand at 5273.075 kb on - strand at 5273.075 kb on - strand at 5273.075 kb on - strand at 5273.075 kb on - strand at 5273.094 kb on + strand at 5273.095 kb on - strand at 5273.095 kb on - strand at 5273.103 kb on + strand at 5273.103 kb on + strand at 5273.104 kb on - strand at 5273.114 kb on + strand at 5273.115 kb on - strand at 5273.134 kb on - strand at 5273.162 kb on + strand at 5273.163 kb on - strand at 5273.251 kb on + strand at 5273.281 kb on + strand at 5273.282 kb on - strand at 5273.293 kb on - strand at 5273.310 kb on + strand at 5273.311 kb on - strand at 5273.343 kb on - strand at 5273.343 kb on - strand at 5273.448 kb on + strand at 5273.448 kb on + strand at 5273.449 kb on - strand at 5273.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 5,271,502 + IAI46_24690 0.73 +0.1 5,271,502 + IAI46_24690 0.73 +0.6 5,271,517 + IAI46_24690 0.74 +1.3 5,271,517 + IAI46_24690 0.74 -1.6 5,271,517 + IAI46_24690 0.74 -0.5 5,271,517 + IAI46_24690 0.74 -1.8 5,271,712 - +0.1 5,271,714 + -0.9 5,271,714 + +0.4 5,271,715 - -0.5 5,271,718 + -0.6 5,271,718 + -0.1 5,271,718 + -0.1 5,271,718 + -0.8 5,271,829 + IAI46_24695 0.11 -0.8 5,271,829 + IAI46_24695 0.11 +0.5 5,271,830 - IAI46_24695 0.11 +0.3 5,271,830 - IAI46_24695 0.11 +0.3 5,271,885 - IAI46_24695 0.23 -0.9 5,271,947 - IAI46_24695 0.36 -3.1 5,272,071 + IAI46_24695 0.62 +0.9 5,272,072 - IAI46_24695 0.63 -1.2 5,272,081 + IAI46_24695 0.65 -0.5 5,272,081 + IAI46_24695 0.65 -0.1 5,272,082 - IAI46_24695 0.65 -0.6 5,272,082 - IAI46_24695 0.65 +0.3 5,272,112 + IAI46_24695 0.71 -2.1 5,272,113 - IAI46_24695 0.71 -1.1 5,272,116 + IAI46_24695 0.72 +0.1 5,272,116 + IAI46_24695 0.72 -0.1 5,272,116 + IAI46_24695 0.72 +0.1 5,272,117 - IAI46_24695 0.72 +0.1 5,272,117 - IAI46_24695 0.72 -0.8 5,272,117 - IAI46_24695 0.72 +0.7 5,272,127 + IAI46_24695 0.74 -0.7 5,272,187 + IAI46_24695 0.87 +0.1 5,272,187 + IAI46_24695 0.87 -1.3 5,272,187 + IAI46_24695 0.87 +0.3 5,272,187 + IAI46_24695 0.87 -1.8 5,272,188 - IAI46_24695 0.87 -0.4 5,272,188 - IAI46_24695 0.87 -0.8 5,272,188 - IAI46_24695 0.87 +2.2 5,272,188 - IAI46_24695 0.87 +0.2 5,272,189 + IAI46_24695 0.87 +1.2 5,272,198 + IAI46_24695 0.89 +1.4 5,272,199 - IAI46_24695 0.90 +0.1 5,272,199 - IAI46_24695 0.90 -1.1 5,272,199 - IAI46_24695 0.90 -0.1 5,272,253 + +0.3 5,272,253 + -1.4 5,272,253 + -1.9 5,272,253 + +1.7 5,272,254 - -0.3 5,272,254 - -1.0 5,272,257 - -1.0 5,272,257 - -1.0 5,272,257 - -0.2 5,272,257 - +1.3 5,272,257 - +1.2 5,272,266 + -0.9 5,272,276 + -1.3 5,272,277 - +0.6 5,272,277 - +0.1 5,272,308 + +0.5 5,272,348 - IAI46_24700 0.16 -0.1 5,272,349 + IAI46_24700 0.17 +0.6 5,272,369 + IAI46_24700 0.25 -0.4 5,272,536 + +0.3 5,272,536 + -0.3 5,272,536 + -0.2 5,272,536 + +0.4 5,272,537 - +0.2 5,272,537 - +0.7 5,272,537 - +0.4 5,272,537 - +0.6 5,272,537 - +0.1 5,272,537 - -0.9 5,272,540 + +0.4 5,272,540 + -0.4 5,272,540 + +1.2 5,272,549 + +0.8 5,272,549 + -0.1 5,272,560 + +0.1 5,272,561 - +0.3 5,272,561 - +0.2 5,272,561 - +0.0 5,272,572 + -0.9 5,272,572 + +0.6 5,272,573 - -0.6 5,272,578 - +0.9 5,272,585 + -0.2 5,272,585 + -1.3 5,272,585 + +0.1 5,272,586 - +0.5 5,272,586 - +0.2 5,272,646 + IAI46_24705 0.14 -0.5 5,272,646 + IAI46_24705 0.14 -1.4 5,272,646 + IAI46_24705 0.14 -1.2 5,272,646 + IAI46_24705 0.14 -0.2 5,272,869 - IAI46_24705 0.66 +0.9 5,272,977 + +0.3 5,272,978 - +0.6 5,272,978 - +0.1 5,272,992 - +1.2 5,273,025 + +0.8 5,273,025 + -1.3 5,273,025 + +0.0 5,273,025 + -0.9 5,273,026 - +0.3 5,273,026 - +0.1 5,273,072 + -0.8 5,273,073 - +0.5 5,273,073 - +0.5 5,273,073 - +0.2 5,273,074 + +0.5 5,273,074 + +0.9 5,273,075 - -1.3 5,273,075 - +0.3 5,273,075 - +0.0 5,273,075 - -0.0 5,273,094 + +0.3 5,273,095 - +0.5 5,273,095 - +1.1 5,273,103 + +0.8 5,273,103 + -0.2 5,273,104 - -0.4 5,273,114 + -0.5 5,273,115 - -1.0 5,273,134 - -0.3 5,273,162 + -0.7 5,273,163 - +0.5 5,273,251 + +0.8 5,273,281 + +0.7 5,273,282 - +0.5 5,273,293 - +0.3 5,273,310 + -0.6 5,273,311 - +0.7 5,273,343 - -0.2 5,273,343 - +0.3 5,273,448 + +0.0 5,273,448 + +0.5 5,273,449 - -0.7 5,273,454 + +0.0
Or see this region's nucleotide sequence