Strain Fitness in Serratia liquefaciens MT49 around IAI46_20615

Experiment: copper (II) chloride 15 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 15 uM, aerobic
4,359,618	+		IAI46_20610	0.41	+0.3
4,359,619	-		IAI46_20610	0.41	+0.2
4,359,667	-		IAI46_20610	0.46	+0.4
4,359,742	-		IAI46_20610	0.55	+0.4
4,359,744	+		IAI46_20610	0.55	+0.5
4,359,744	+		IAI46_20610	0.55	-0.0
4,359,744	+		IAI46_20610	0.55	-0.4
4,359,745	-		IAI46_20610	0.55	-1.6
4,359,811	+		IAI46_20610	0.62	+0.1
4,359,811	+		IAI46_20610	0.62	+0.2
4,359,812	-		IAI46_20610	0.62	-0.0
4,359,824	+		IAI46_20610	0.64	-0.6
4,359,824	+		IAI46_20610	0.64	+0.2
4,359,825	-		IAI46_20610	0.64	+0.2
4,359,825	-		IAI46_20610	0.64	+0.6
4,359,825	-		IAI46_20610	0.64	+0.7
4,359,825	-		IAI46_20610	0.64	+0.4
4,359,825	-		IAI46_20610	0.64	+0.4
4,359,825	-		IAI46_20610	0.64	-0.1
4,359,825	-		IAI46_20610	0.64	+0.7
4,359,831	-		IAI46_20610	0.64	-2.2
4,359,831	-		IAI46_20610	0.64	-0.5
4,359,901	+		IAI46_20610	0.72	-1.8
4,359,964	+		IAI46_20610	0.79	-0.1
4,359,965	-		IAI46_20610	0.79	-1.6
4,360,021	-		IAI46_20610	0.85	+0.1
4,360,021	-		IAI46_20610	0.85	+0.4
4,360,050	+		IAI46_20610	0.88	+0.4
4,360,051	-		IAI46_20610	0.88	-0.2
4,360,053	+		IAI46_20610	0.88	-0.6
4,360,054	-		IAI46_20610	0.88	-1.0
4,360,054	-		IAI46_20610	0.88	+0.1
4,360,070	+				+0.2
4,360,077	-				+0.3
4,360,077	-				-0.6
4,360,077	-				+1.0
4,360,079	-				-0.4
4,360,079	-				+0.1
4,360,090	-				+0.0
4,360,095	+				+0.3
4,360,120	+				-1.1
4,360,120	+				+1.5
4,360,121	-				+0.6
4,360,121	-				+0.1
4,360,141	+				+1.1
4,360,142	-				+0.2
4,360,172	+				-0.2
4,360,173	-				-0.2
4,360,231	+				-0.2
4,360,248	+				-0.6
4,360,252	+				-0.3
4,360,331	+				+0.1
4,360,331	+				+0.8
4,360,332	-				+1.1
4,360,333	+				-0.6
4,360,333	+				+0.8
4,360,333	+				-0.0
4,360,365	+				-0.8
4,360,446	+				+0.2
4,360,450	+				+0.7
4,360,454	+				+0.3
4,360,495	+				+0.4
4,360,495	+				-0.7
4,360,495	+				-1.2
4,360,495	+				+0.5
4,360,496	-				+1.0
4,360,496	-				-0.1
4,360,604	+				-0.4
4,360,604	+				-0.6
4,360,605	-				+0.7
4,360,606	+				-0.1
4,360,617	+				-0.0
4,360,617	+				-0.2
4,360,647	+				-0.4
4,360,647	+				-0.2
4,360,647	+				+0.2
4,360,648	-				+0.3
4,360,648	-				-0.6
4,360,648	-				-1.2
4,360,683	+		IAI46_20615	0.12	-0.1
4,360,690	+		IAI46_20615	0.12	+0.2
4,360,691	-		IAI46_20615	0.12	-0.1
4,360,691	-		IAI46_20615	0.12	+0.7
4,360,758	+		IAI46_20615	0.17	+0.2
4,360,777	+		IAI46_20615	0.18	-0.5
4,360,836	+		IAI46_20615	0.21	-0.6
4,360,837	-		IAI46_20615	0.22	+0.1
4,360,837	-		IAI46_20615	0.22	-0.1
4,360,837	-		IAI46_20615	0.22	-0.3
4,360,932	+		IAI46_20615	0.28	-0.9
4,360,932	+		IAI46_20615	0.28	+0.1
4,361,147	-		IAI46_20615	0.41	+0.5
4,361,161	+		IAI46_20615	0.42	+0.5
4,361,161	+		IAI46_20615	0.42	+1.1
4,361,162	-		IAI46_20615	0.42	-1.1
4,361,162	-		IAI46_20615	0.42	-0.0
4,361,162	-		IAI46_20615	0.42	-0.8
4,361,172	-		IAI46_20615	0.43	+0.1
4,361,195	+		IAI46_20615	0.44	+2.3
4,361,318	-		IAI46_20615	0.52	-1.2
4,361,371	-		IAI46_20615	0.55	-0.1
4,361,391	+		IAI46_20615	0.57	+0.4
4,361,392	-		IAI46_20615	0.57	+0.1
4,361,392	-		IAI46_20615	0.57	+0.0
4,361,392	-		IAI46_20615	0.57	-0.2
4,361,416	+		IAI46_20615	0.58	-0.5
4,361,537	+		IAI46_20615	0.66	-0.3
4,361,581	+		IAI46_20615	0.68	+0.9
4,361,822	-		IAI46_20615	0.84	+0.4
4,361,825	-		IAI46_20615	0.84	+0.8
4,361,935	+				+0.5
4,361,935	+				-0.1
4,361,935	+				+1.1
4,361,936	-				-0.1
4,361,936	-				+0.4
4,361,953	+				+0.7
4,361,953	+				-1.3
4,361,953	+				+0.1
4,361,953	+				+0.9
4,361,953	+				+1.1
4,361,953	+				-0.2
4,361,954	-				+0.1
4,361,956	+				-0.3
4,362,036	-				-1.1
4,362,087	+				+0.3
4,362,087	+				+1.6
4,362,106	-				+0.0
4,362,182	+				+0.4
4,362,182	+				+0.4
4,362,182	+				-0.2
4,362,182	+				+0.8
4,362,183	-				+0.0
4,362,183	-				-1.3
4,362,184	+				-2.2
4,362,185	-				-0.9
4,362,211	+				+0.6
4,362,211	+				-1.5
4,362,211	+				-0.2
4,362,211	+				-0.4
4,362,212	-				-0.6
4,362,212	-				-0.1
4,362,223	+				+1.1
4,362,224	-				+0.1
4,362,224	-				+0.3
4,362,252	+		IAI46_20620	0.12	+0.0
4,362,334	-		IAI46_20620	0.19	+0.5
4,362,362	+		IAI46_20620	0.22	-0.5
4,362,362	+		IAI46_20620	0.22	-1.0
4,362,362	+		IAI46_20620	0.22	-0.6
4,362,362	+		IAI46_20620	0.22	+0.0
4,362,363	-		IAI46_20620	0.22	+2.0
4,362,363	-		IAI46_20620	0.22	+0.8
4,362,363	-		IAI46_20620	0.22	-0.3
4,362,363	-		IAI46_20620	0.22	-0.6
4,362,363	-		IAI46_20620	0.22	+2.3
4,362,363	-		IAI46_20620	0.22	+0.0
4,362,441	+		IAI46_20620	0.29	-0.0
4,362,442	-		IAI46_20620	0.29	-0.4
4,362,497	+		IAI46_20620	0.34	+0.2
4,362,497	+		IAI46_20620	0.34	+1.4
4,362,497	+		IAI46_20620	0.34	-0.2
4,362,498	-		IAI46_20620	0.34	-0.8
4,362,498	-		IAI46_20620	0.34	-0.3
4,362,584	-		IAI46_20620	0.41	+0.4
4,362,625	+		IAI46_20620	0.45	-0.1
4,362,670	+		IAI46_20620	0.49	-0.4
4,362,770	+		IAI46_20620	0.57	-0.8
4,362,770	+		IAI46_20620	0.57	+0.6
4,362,770	+		IAI46_20620	0.57	+0.7
4,362,770	+		IAI46_20620	0.57	+0.0
4,362,770	+		IAI46_20620	0.57	+0.4
4,362,770	+		IAI46_20620	0.57	-0.4
4,362,771	-		IAI46_20620	0.58	-0.6
4,362,771	-		IAI46_20620	0.58	+0.1
4,362,862	+		IAI46_20620	0.66	+1.2
4,362,863	-		IAI46_20620	0.66	+1.0
4,362,960	+		IAI46_20620	0.74	+1.6
4,362,960	+		IAI46_20620	0.74	+0.9
4,362,960	+		IAI46_20620	0.74	-0.5
4,362,960	+		IAI46_20620	0.74	+0.1
4,362,961	-		IAI46_20620	0.74	+1.4
4,362,961	-		IAI46_20620	0.74	+0.1
4,362,961	-		IAI46_20620	0.74	+0.2
4,362,961	-		IAI46_20620	0.74	-0.0
4,363,016	-		IAI46_20620	0.79	-0.0
4,363,016	-		IAI46_20620	0.79	+0.3