Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_20200 and IAI46_20205 are separated by 3 nucleotides IAI46_20205 and IAI46_20210 are separated by 160 nucleotides IAI46_20210 and IAI46_20215 are separated by 4 nucleotides IAI46_20215 and IAI46_20220 are separated by 158 nucleotides
IAI46_20200: IAI46_20200 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 4,262,032 to 4,262,820
_20200
IAI46_20205: IAI46_20205 - 3-hydroxyacyl-ACP dehydratase FabZ, at 4,262,824 to 4,263,279
_20205
IAI46_20210: IAI46_20210 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 4,263,440 to 4,264,462
_20210
IAI46_20215: IAI46_20215 - molecular chaperone Skp, at 4,264,467 to 4,264,964
_20215
IAI46_20220: IAI46_20220 - outer membrane protein assembly factor BamA, at 4,265,123 to 4,267,525
_20220
Position (kb) 4263
4264
4265 Strain fitness (log2 ratio) -1
0
1
2 at 4263.416 kb on - strand at 4263.442 kb on - strand at 4263.442 kb on - strand at 4264.546 kb on - strand, within IAI46_20215 at 4264.546 kb on - strand, within IAI46_20215 at 4264.546 kb on - strand, within IAI46_20215 at 4264.546 kb on - strand, within IAI46_20215 at 4264.546 kb on - strand, within IAI46_20215 at 4264.977 kb on - strand at 4265.012 kb on - strand at 4265.030 kb on - strand at 4265.092 kb on - strand at 4265.125 kb on - strand at 4265.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 4,263,416 - +1.0 4,263,442 - +1.0 4,263,442 - +0.5 4,264,546 - IAI46_20215 0.16 -0.3 4,264,546 - IAI46_20215 0.16 -1.6 4,264,546 - IAI46_20215 0.16 +1.0 4,264,546 - IAI46_20215 0.16 -0.4 4,264,546 - IAI46_20215 0.16 -1.3 4,264,977 - +2.0 4,265,012 - +1.2 4,265,030 - +1.0 4,265,092 - +0.0 4,265,125 - -0.6 4,265,125 - -0.3
Or see this region's nucleotide sequence