Strain Fitness in Serratia liquefaciens MT49 around IAI46_20155

Experiment: copper (II) chloride 15 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 15 uM, aerobic
4,249,414	+		IAI46_20150	0.54	-0.7
4,249,415	-		IAI46_20150	0.54	+0.0
4,249,415	-		IAI46_20150	0.54	+0.7
4,249,462	-		IAI46_20150	0.57	+1.4
4,249,501	-		IAI46_20150	0.60	+0.3
4,249,510	-		IAI46_20150	0.61	-0.3
4,249,510	-		IAI46_20150	0.61	+0.0
4,249,518	-		IAI46_20150	0.61	+0.2
4,249,518	-		IAI46_20150	0.61	-0.1
4,249,518	-		IAI46_20150	0.61	-0.4
4,249,518	-		IAI46_20150	0.61	+1.7
4,249,582	+		IAI46_20150	0.66	+0.2
4,249,593	+		IAI46_20150	0.67	+0.3
4,249,593	+		IAI46_20150	0.67	+0.5
4,249,594	-		IAI46_20150	0.67	-0.7
4,249,594	-		IAI46_20150	0.67	+0.6
4,249,635	+		IAI46_20150	0.70	-0.4
4,249,635	+		IAI46_20150	0.70	+0.5
4,249,635	+		IAI46_20150	0.70	+0.4
4,249,636	-		IAI46_20150	0.70	-1.2
4,249,636	-		IAI46_20150	0.70	+0.3
4,249,646	-		IAI46_20150	0.71	+0.9
4,249,646	-		IAI46_20150	0.71	-0.6
4,249,662	+		IAI46_20150	0.72	+0.4
4,249,662	+		IAI46_20150	0.72	-0.1
4,249,663	-		IAI46_20150	0.72	+0.3
4,249,710	+		IAI46_20150	0.76	+0.9
4,249,719	-		IAI46_20150	0.76	+0.2
4,249,769	+		IAI46_20150	0.80	+0.0
4,249,773	-		IAI46_20150	0.80	-0.3
4,249,870	+		IAI46_20150	0.88	+1.8
4,249,871	-		IAI46_20150	0.88	+0.3
4,249,871	-		IAI46_20150	0.88	+0.2
4,249,871	-		IAI46_20150	0.88	+0.4
4,250,010	+				+0.2
4,250,066	-				-0.3
4,250,177	+				-0.3
4,250,322	-				-0.7
4,250,322	-				+0.5
4,250,419	+				-1.5
4,250,448	-				+0.4
4,250,475	+				+0.4
4,250,476	-				+0.5
4,250,525	-				-1.8
4,250,617	-		IAI46_20155	0.14	-0.1
4,250,617	-		IAI46_20155	0.14	-0.1
4,250,619	-		IAI46_20155	0.14	+2.0
4,250,667	+		IAI46_20155	0.17	-0.3
4,250,667	+		IAI46_20155	0.17	-0.4
4,250,668	-		IAI46_20155	0.17	-0.2
4,250,687	+		IAI46_20155	0.18	+0.6
4,250,776	+		IAI46_20155	0.24	-0.9
4,250,777	-		IAI46_20155	0.24	+3.0
4,250,777	-		IAI46_20155	0.24	-1.0
4,250,862	-		IAI46_20155	0.29	+0.0
4,250,864	+		IAI46_20155	0.30	-0.1
4,250,864	+		IAI46_20155	0.30	+0.9
4,250,865	-		IAI46_20155	0.30	+0.1
4,250,923	+		IAI46_20155	0.33	+0.0
4,250,999	+		IAI46_20155	0.38	+0.3
4,250,999	+		IAI46_20155	0.38	+0.8
4,251,009	-		IAI46_20155	0.39	+0.2
4,251,009	-		IAI46_20155	0.39	+0.1
4,251,009	-		IAI46_20155	0.39	+0.1
4,251,086	+		IAI46_20155	0.44	+1.1
4,251,086	+		IAI46_20155	0.44	-0.8
4,251,087	-		IAI46_20155	0.44	-0.7
4,251,087	-		IAI46_20155	0.44	-0.9
4,251,087	-		IAI46_20155	0.44	-0.6
4,251,087	-		IAI46_20155	0.44	+0.3
4,251,202	+		IAI46_20155	0.51	+0.4
4,251,208	+		IAI46_20155	0.52	+2.0
4,251,208	+		IAI46_20155	0.52	+0.7
4,251,208	+		IAI46_20155	0.52	+0.6
4,251,208	+		IAI46_20155	0.52	-0.0
4,251,209	-		IAI46_20155	0.52	+0.2
4,251,209	-		IAI46_20155	0.52	+0.1
4,251,212	+		IAI46_20155	0.52	-0.0
4,251,213	-		IAI46_20155	0.52	-0.1
4,251,241	+		IAI46_20155	0.54	-0.2
4,251,241	+		IAI46_20155	0.54	+0.6
4,251,241	+		IAI46_20155	0.54	-0.6
4,251,241	+		IAI46_20155	0.54	+0.3
4,251,242	-		IAI46_20155	0.54	-0.7
4,251,286	+		IAI46_20155	0.57	+0.9
4,251,286	+		IAI46_20155	0.57	+0.1
4,251,286	+		IAI46_20155	0.57	-0.2
4,251,287	-		IAI46_20155	0.57	+0.4
4,251,287	-		IAI46_20155	0.57	+0.4
4,251,332	+		IAI46_20155	0.60	-0.3
4,251,333	-		IAI46_20155	0.60	+0.0
4,251,385	-		IAI46_20155	0.63	+0.5
4,251,478	+		IAI46_20155	0.69	-1.3
4,251,538	+		IAI46_20155	0.73	+0.5
4,251,538	+		IAI46_20155	0.73	-0.3
4,251,649	-		IAI46_20155	0.80	-0.6
4,251,665	+		IAI46_20155	0.81	-1.2
4,251,666	-		IAI46_20155	0.81	+0.1
4,251,666	-		IAI46_20155	0.81	-0.5
4,251,666	-		IAI46_20155	0.81	-0.1
4,251,666	-		IAI46_20155	0.81	+0.9
4,251,666	-		IAI46_20155	0.81	-0.2
4,251,666	-		IAI46_20155	0.81	+0.4
4,251,689	+		IAI46_20155	0.83	+0.0
4,251,689	+		IAI46_20155	0.83	+1.7
4,251,690	-		IAI46_20155	0.83	+0.0
4,251,690	-		IAI46_20155	0.83	+1.5
4,251,694	+		IAI46_20155	0.83	+0.7
4,251,694	+		IAI46_20155	0.83	+0.5
4,251,711	-		IAI46_20155	0.84	+0.2
4,251,727	+		IAI46_20155	0.85	-0.6
4,251,790	-		IAI46_20155	0.89	+0.0
4,251,790	-		IAI46_20155	0.89	+0.3
4,251,790	-		IAI46_20155	0.89	+0.7
4,251,845	-				+0.3
4,251,901	-				+2.6
4,251,920	+				+0.3
4,251,921	-				+0.1
4,251,924	+				-0.1
4,251,925	-				-0.1
4,251,960	-				+0.6
4,251,968	+				+0.9
4,251,969	-				-0.1
4,251,969	-				+1.0
4,252,003	+				+0.8
4,252,003	+				+0.6
4,252,004	-				+0.6
4,252,004	-				+0.4
4,252,004	-				+0.7
4,252,004	-				+0.4
4,252,008	+				-0.4
4,252,008	+				-0.7
4,252,008	+				-1.8
4,252,008	+				+0.4
4,252,009	-				-0.2
4,252,052	+				-0.6
4,252,052	+				+0.3
4,252,052	+				-0.2
4,252,052	+				+0.5
4,252,053	-				+0.4
4,252,053	-				-0.1
4,252,053	-				-0.0
4,252,061	+				+0.6
4,252,061	+				-0.3
4,252,061	+				+1.1
4,252,061	+				+1.0
4,252,062	-				-0.4
4,252,068	-				+0.9
4,252,074	-				+0.8
4,252,116	+		IAI46_20160	0.17	-0.4
4,252,117	-		IAI46_20160	0.17	-0.1
4,252,117	-		IAI46_20160	0.17	+1.3
4,252,117	-		IAI46_20160	0.17	+0.1
4,252,117	-		IAI46_20160	0.17	+0.2
4,252,278	+		IAI46_20160	0.59	+0.5
4,252,279	-		IAI46_20160	0.59	+0.4
4,252,340	+		IAI46_20160	0.75	+0.1
4,252,341	-		IAI46_20160	0.75	-0.6
4,252,360	+		IAI46_20160	0.80	-0.5
4,252,369	-		IAI46_20160	0.82	+0.1
4,252,400	+				-1.3
4,252,400	+				+0.2
4,252,400	+				-0.9
4,252,401	-				+0.3
4,252,402	+				-0.4
4,252,402	+				+0.1
4,252,403	-				+0.5
4,252,418	+				+0.7
4,252,419	-				+0.3
4,252,428	-				+0.3
4,252,540	+				+0.3
4,252,541	-				+1.0
4,252,554	+				+0.3
4,252,555	-				-0.6
4,252,594	-		IAI46_20165	0.14	+0.8
4,252,594	-		IAI46_20165	0.14	-0.1
4,252,776	+				+1.6
4,252,777	-				+0.6
4,252,789	+				+1.2
4,252,790	-				+0.9
4,252,799	-				+1.7
4,252,873	-				+0.0
4,252,873	-				-0.7