Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04445 and IAI46_04450 are separated by 147 nucleotides IAI46_04450 and IAI46_04455 are separated by 303 nucleotides
IAI46_04445: IAI46_04445 - cytochrome b561, at 951,231 to 951,755
_04445
IAI46_04450: IAI46_04450 - ABC transporter substrate-binding protein, at 951,903 to 953,501
_04450
IAI46_04455: IAI46_04455 - DUF1471 domain-containing protein, at 953,805 to 954,059
_04455
Position (kb) 951
952
953
954 Strain fitness (log2 ratio) -2
-1
0
1
2 at 950.942 kb on + strand at 950.943 kb on - strand at 950.943 kb on - strand at 950.975 kb on - strand at 951.068 kb on + strand at 951.068 kb on + strand at 951.104 kb on - strand at 951.104 kb on - strand at 951.107 kb on + strand at 951.120 kb on - strand at 951.121 kb on + strand at 951.200 kb on - strand at 951.257 kb on + strand at 951.258 kb on - strand at 951.284 kb on + strand, within IAI46_04445 at 951.284 kb on + strand, within IAI46_04445 at 951.285 kb on - strand, within IAI46_04445 at 951.285 kb on - strand, within IAI46_04445 at 951.286 kb on + strand, within IAI46_04445 at 951.286 kb on + strand, within IAI46_04445 at 951.286 kb on + strand, within IAI46_04445 at 951.287 kb on - strand, within IAI46_04445 at 951.354 kb on - strand, within IAI46_04445 at 951.366 kb on - strand, within IAI46_04445 at 951.448 kb on + strand, within IAI46_04445 at 951.458 kb on - strand, within IAI46_04445 at 951.458 kb on - strand, within IAI46_04445 at 951.609 kb on + strand, within IAI46_04445 at 951.610 kb on - strand, within IAI46_04445 at 951.610 kb on - strand, within IAI46_04445 at 951.649 kb on + strand, within IAI46_04445 at 951.649 kb on + strand, within IAI46_04445 at 951.755 kb on + strand at 951.755 kb on + strand at 951.756 kb on - strand at 951.757 kb on + strand at 951.757 kb on + strand at 951.757 kb on + strand at 951.757 kb on + strand at 951.758 kb on - strand at 951.758 kb on - strand at 951.758 kb on - strand at 951.758 kb on - strand at 951.777 kb on - strand at 951.823 kb on - strand at 951.979 kb on + strand at 951.979 kb on + strand at 951.980 kb on - strand at 952.049 kb on - strand at 952.049 kb on - strand at 952.108 kb on + strand, within IAI46_04450 at 952.109 kb on - strand, within IAI46_04450 at 952.213 kb on + strand, within IAI46_04450 at 952.214 kb on - strand, within IAI46_04450 at 952.214 kb on - strand, within IAI46_04450 at 952.255 kb on + strand, within IAI46_04450 at 952.256 kb on - strand, within IAI46_04450 at 952.256 kb on - strand, within IAI46_04450 at 952.256 kb on - strand, within IAI46_04450 at 952.290 kb on + strand, within IAI46_04450 at 952.380 kb on - strand, within IAI46_04450 at 952.380 kb on - strand, within IAI46_04450 at 952.444 kb on + strand, within IAI46_04450 at 952.444 kb on + strand, within IAI46_04450 at 952.444 kb on + strand, within IAI46_04450 at 952.445 kb on - strand, within IAI46_04450 at 952.471 kb on + strand, within IAI46_04450 at 952.472 kb on - strand, within IAI46_04450 at 952.502 kb on - strand, within IAI46_04450 at 952.562 kb on - strand, within IAI46_04450 at 952.562 kb on - strand, within IAI46_04450 at 952.562 kb on - strand, within IAI46_04450 at 952.712 kb on + strand, within IAI46_04450 at 952.713 kb on - strand, within IAI46_04450 at 952.767 kb on - strand, within IAI46_04450 at 952.828 kb on + strand, within IAI46_04450 at 952.828 kb on + strand, within IAI46_04450 at 952.853 kb on - strand, within IAI46_04450 at 952.893 kb on - strand, within IAI46_04450 at 952.936 kb on + strand, within IAI46_04450 at 952.937 kb on - strand, within IAI46_04450 at 953.009 kb on + strand, within IAI46_04450 at 953.086 kb on + strand, within IAI46_04450 at 953.087 kb on - strand, within IAI46_04450 at 953.111 kb on - strand, within IAI46_04450 at 953.188 kb on + strand, within IAI46_04450 at 953.225 kb on + strand, within IAI46_04450 at 953.226 kb on - strand, within IAI46_04450 at 953.323 kb on + strand, within IAI46_04450 at 953.323 kb on + strand, within IAI46_04450 at 953.323 kb on + strand, within IAI46_04450 at 953.324 kb on - strand, within IAI46_04450 at 953.345 kb on + strand at 953.408 kb on - strand at 953.502 kb on - strand at 953.577 kb on + strand at 953.578 kb on - strand at 953.666 kb on - strand at 953.668 kb on - strand at 953.673 kb on + strand at 953.673 kb on + strand at 953.673 kb on + strand at 953.673 kb on + strand at 953.674 kb on - strand at 953.674 kb on - strand at 953.677 kb on + strand at 953.677 kb on + strand at 953.677 kb on + strand at 953.715 kb on + strand at 953.751 kb on + strand at 953.751 kb on + strand at 953.751 kb on + strand at 953.751 kb on + strand at 953.752 kb on - strand at 953.752 kb on - strand at 953.790 kb on + strand at 953.790 kb on + strand at 953.791 kb on - strand at 953.802 kb on + strand at 953.802 kb on + strand at 953.803 kb on - strand at 953.805 kb on - strand at 953.805 kb on - strand at 953.816 kb on + strand at 953.820 kb on + strand at 953.997 kb on + strand, within IAI46_04455 at 954.005 kb on + strand, within IAI46_04455 at 954.051 kb on + strand at 954.057 kb on + strand at 954.090 kb on + strand at 954.134 kb on + strand at 954.156 kb on - strand at 954.156 kb on - strand at 954.334 kb on + strand at 954.334 kb on + strand at 954.334 kb on + strand at 954.335 kb on - strand at 954.375 kb on + strand at 954.375 kb on + strand at 954.375 kb on + strand at 954.375 kb on + strand at 954.376 kb on - strand at 954.376 kb on - strand at 954.376 kb on - strand at 954.376 kb on - strand at 954.378 kb on + strand at 954.378 kb on + strand at 954.379 kb on - strand at 954.379 kb on - strand at 954.431 kb on + strand at 954.432 kb on - strand at 954.495 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 950,942 + -0.2 950,943 - +0.2 950,943 - +0.2 950,975 - +1.6 951,068 + +1.2 951,068 + +0.5 951,104 - +0.0 951,104 - +0.1 951,107 + -0.4 951,120 - -0.6 951,121 + +0.0 951,200 - +0.0 951,257 + -1.0 951,258 - +0.7 951,284 + IAI46_04445 0.10 +1.5 951,284 + IAI46_04445 0.10 +0.0 951,285 - IAI46_04445 0.10 +0.7 951,285 - IAI46_04445 0.10 +0.9 951,286 + IAI46_04445 0.10 -0.2 951,286 + IAI46_04445 0.10 +0.0 951,286 + IAI46_04445 0.10 +0.3 951,287 - IAI46_04445 0.11 +0.3 951,354 - IAI46_04445 0.23 +0.6 951,366 - IAI46_04445 0.26 -1.1 951,448 + IAI46_04445 0.41 -1.3 951,458 - IAI46_04445 0.43 +0.1 951,458 - IAI46_04445 0.43 +1.0 951,609 + IAI46_04445 0.72 +0.1 951,610 - IAI46_04445 0.72 +0.4 951,610 - IAI46_04445 0.72 +0.8 951,649 + IAI46_04445 0.80 -0.6 951,649 + IAI46_04445 0.80 +0.6 951,755 + -0.3 951,755 + +0.2 951,756 - +0.3 951,757 + +0.3 951,757 + -2.2 951,757 + +0.5 951,757 + +0.6 951,758 - +0.1 951,758 - -0.6 951,758 - +0.6 951,758 - -0.6 951,777 - +0.0 951,823 - +0.0 951,979 + +0.1 951,979 + +1.3 951,980 - -0.1 952,049 - +1.7 952,049 - +0.2 952,108 + IAI46_04450 0.13 +0.1 952,109 - IAI46_04450 0.13 +0.0 952,213 + IAI46_04450 0.19 -0.5 952,214 - IAI46_04450 0.19 +0.3 952,214 - IAI46_04450 0.19 -0.9 952,255 + IAI46_04450 0.22 -1.2 952,256 - IAI46_04450 0.22 -0.6 952,256 - IAI46_04450 0.22 +0.1 952,256 - IAI46_04450 0.22 +0.4 952,290 + IAI46_04450 0.24 +0.6 952,380 - IAI46_04450 0.30 +0.8 952,380 - IAI46_04450 0.30 +0.3 952,444 + IAI46_04450 0.34 +0.6 952,444 + IAI46_04450 0.34 +0.2 952,444 + IAI46_04450 0.34 -1.0 952,445 - IAI46_04450 0.34 +0.1 952,471 + IAI46_04450 0.36 -0.8 952,472 - IAI46_04450 0.36 -0.6 952,502 - IAI46_04450 0.37 -0.3 952,562 - IAI46_04450 0.41 -0.5 952,562 - IAI46_04450 0.41 +0.6 952,562 - IAI46_04450 0.41 +0.3 952,712 + IAI46_04450 0.51 +0.2 952,713 - IAI46_04450 0.51 -0.4 952,767 - IAI46_04450 0.54 -0.9 952,828 + IAI46_04450 0.58 -0.7 952,828 + IAI46_04450 0.58 +0.4 952,853 - IAI46_04450 0.59 +0.1 952,893 - IAI46_04450 0.62 +0.4 952,936 + IAI46_04450 0.65 +0.3 952,937 - IAI46_04450 0.65 +2.0 953,009 + IAI46_04450 0.69 -0.2 953,086 + IAI46_04450 0.74 +0.5 953,087 - IAI46_04450 0.74 +0.6 953,111 - IAI46_04450 0.76 +0.7 953,188 + IAI46_04450 0.80 -1.0 953,225 + IAI46_04450 0.83 -0.2 953,226 - IAI46_04450 0.83 +0.1 953,323 + IAI46_04450 0.89 +0.0 953,323 + IAI46_04450 0.89 +0.6 953,323 + IAI46_04450 0.89 +0.3 953,324 - IAI46_04450 0.89 -0.2 953,345 + -0.6 953,408 - -0.9 953,502 - +1.1 953,577 + +0.5 953,578 - -0.0 953,666 - +1.1 953,668 - +0.9 953,673 + +0.8 953,673 + -0.1 953,673 + -0.0 953,673 + +0.2 953,674 - -0.0 953,674 - +0.3 953,677 + -1.8 953,677 + +0.3 953,677 + +0.3 953,715 + -0.4 953,751 + +0.6 953,751 + +1.0 953,751 + -0.1 953,751 + +0.8 953,752 - -0.0 953,752 - -0.4 953,790 + +0.6 953,790 + -0.7 953,791 - -0.2 953,802 + +1.5 953,802 + -0.1 953,803 - +0.1 953,805 - +0.9 953,805 - -1.1 953,816 + -0.8 953,820 + -0.4 953,997 + IAI46_04455 0.75 +0.6 954,005 + IAI46_04455 0.78 +0.5 954,051 + -0.1 954,057 + -0.4 954,090 + +0.6 954,134 + +0.5 954,156 - -0.4 954,156 - -1.4 954,334 + +0.3 954,334 + -0.3 954,334 + +0.1 954,335 - +0.1 954,375 + +0.6 954,375 + +0.1 954,375 + +0.2 954,375 + +0.2 954,376 - -0.8 954,376 - +0.5 954,376 - -0.7 954,376 - +1.0 954,378 + +0.4 954,378 + +0.8 954,379 - +0.2 954,379 - +0.4 954,431 + +0.3 954,432 - -0.2 954,495 + +0.3
Or see this region's nucleotide sequence