Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03700 and IAI46_03705 are separated by 275 nucleotides IAI46_03705 and IAI46_03710 are separated by 187 nucleotides
IAI46_03700: IAI46_03700 - aminopeptidase, at 807,491 to 808,567
_03700
IAI46_03705: IAI46_03705 - hypothetical protein, at 808,843 to 809,109
_03705
IAI46_03710: IAI46_03710 - uroporphyrinogen-III C-methyltransferase, at 809,297 to 810,727
_03710
Position (kb) 808
809
810 Strain fitness (log2 ratio) -1
0
1 at 807.895 kb on + strand, within IAI46_03700 at 807.915 kb on + strand, within IAI46_03700 at 807.916 kb on - strand, within IAI46_03700 at 807.950 kb on - strand, within IAI46_03700 at 807.960 kb on - strand, within IAI46_03700 at 807.964 kb on + strand, within IAI46_03700 at 807.965 kb on - strand, within IAI46_03700 at 807.999 kb on + strand, within IAI46_03700 at 808.078 kb on + strand, within IAI46_03700 at 808.079 kb on - strand, within IAI46_03700 at 808.191 kb on + strand, within IAI46_03700 at 808.191 kb on + strand, within IAI46_03700 at 808.191 kb on + strand, within IAI46_03700 at 808.192 kb on - strand, within IAI46_03700 at 808.192 kb on - strand, within IAI46_03700 at 808.243 kb on + strand, within IAI46_03700 at 808.274 kb on - strand, within IAI46_03700 at 808.305 kb on + strand, within IAI46_03700 at 808.306 kb on - strand, within IAI46_03700 at 808.622 kb on + strand at 808.623 kb on - strand at 808.643 kb on - strand at 808.643 kb on - strand at 808.757 kb on + strand at 808.757 kb on + strand at 808.757 kb on + strand at 808.758 kb on - strand at 808.760 kb on + strand at 808.760 kb on + strand at 808.773 kb on - strand at 808.776 kb on + strand at 808.776 kb on + strand at 808.776 kb on + strand at 808.777 kb on - strand at 808.777 kb on - strand at 808.777 kb on - strand at 808.789 kb on - strand at 808.789 kb on - strand at 808.789 kb on - strand at 808.799 kb on - strand at 808.894 kb on + strand, within IAI46_03705 at 808.895 kb on - strand, within IAI46_03705 at 808.895 kb on - strand, within IAI46_03705 at 808.911 kb on + strand, within IAI46_03705 at 808.911 kb on + strand, within IAI46_03705 at 808.979 kb on + strand, within IAI46_03705 at 808.983 kb on + strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 809.018 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.059 kb on - strand, within IAI46_03705 at 809.141 kb on + strand at 809.141 kb on + strand at 809.142 kb on - strand at 809.167 kb on + strand at 809.167 kb on + strand at 809.199 kb on - strand at 809.207 kb on - strand at 809.214 kb on + strand at 809.215 kb on - strand at 809.215 kb on - strand at 809.215 kb on - strand at 809.258 kb on - strand at 809.258 kb on - strand at 809.259 kb on + strand at 809.260 kb on - strand at 809.260 kb on - strand at 809.268 kb on + strand at 809.268 kb on + strand at 809.268 kb on + strand at 809.280 kb on + strand at 809.281 kb on - strand at 809.281 kb on - strand at 809.281 kb on - strand at 809.282 kb on + strand at 809.282 kb on + strand at 809.282 kb on + strand at 809.283 kb on - strand at 809.283 kb on - strand at 809.283 kb on - strand at 809.303 kb on + strand at 809.303 kb on + strand at 809.303 kb on + strand at 809.304 kb on - strand at 809.304 kb on - strand at 809.304 kb on - strand at 809.307 kb on + strand at 809.307 kb on + strand at 809.307 kb on + strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.311 kb on + strand at 809.311 kb on + strand at 809.311 kb on + strand at 809.312 kb on - strand at 809.314 kb on - strand at 809.409 kb on + strand at 809.410 kb on - strand at 809.410 kb on - strand at 809.415 kb on + strand at 809.416 kb on - strand at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 810.045 kb on - strand, within IAI46_03710
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 807,895 + IAI46_03700 0.38 +0.5 807,915 + IAI46_03700 0.39 +0.3 807,916 - IAI46_03700 0.39 +0.2 807,950 - IAI46_03700 0.43 -0.1 807,960 - IAI46_03700 0.44 -0.3 807,964 + IAI46_03700 0.44 +0.3 807,965 - IAI46_03700 0.44 +0.7 807,999 + IAI46_03700 0.47 -0.2 808,078 + IAI46_03700 0.55 -0.5 808,079 - IAI46_03700 0.55 +0.5 808,191 + IAI46_03700 0.65 +0.3 808,191 + IAI46_03700 0.65 +0.0 808,191 + IAI46_03700 0.65 +0.5 808,192 - IAI46_03700 0.65 -0.7 808,192 - IAI46_03700 0.65 -0.3 808,243 + IAI46_03700 0.70 -0.0 808,274 - IAI46_03700 0.73 -0.7 808,305 + IAI46_03700 0.76 +0.3 808,306 - IAI46_03700 0.76 +0.5 808,622 + -1.3 808,623 - +0.8 808,643 - +0.3 808,643 - +0.1 808,757 + -0.4 808,757 + +0.4 808,757 + -0.6 808,758 - -0.3 808,760 + +0.1 808,760 + +0.1 808,773 - -0.1 808,776 + +0.2 808,776 + +0.1 808,776 + -0.2 808,777 - +0.7 808,777 - +0.1 808,777 - +0.2 808,789 - +1.1 808,789 - -0.5 808,789 - +0.0 808,799 - -0.7 808,894 + IAI46_03705 0.19 -0.9 808,895 - IAI46_03705 0.19 -0.1 808,895 - IAI46_03705 0.19 +0.9 808,911 + IAI46_03705 0.25 +1.3 808,911 + IAI46_03705 0.25 +0.2 808,979 + IAI46_03705 0.51 +0.4 808,983 + IAI46_03705 0.52 -0.2 808,984 - IAI46_03705 0.53 +0.7 808,984 - IAI46_03705 0.53 -0.8 808,984 - IAI46_03705 0.53 -0.2 808,984 - IAI46_03705 0.53 +0.5 808,984 - IAI46_03705 0.53 +1.1 809,018 + IAI46_03705 0.66 +1.1 809,025 + IAI46_03705 0.68 -0.0 809,025 + IAI46_03705 0.68 -1.1 809,025 + IAI46_03705 0.68 +0.1 809,059 - IAI46_03705 0.81 +0.0 809,141 + +0.7 809,141 + -0.1 809,142 - -1.6 809,167 + +0.5 809,167 + -0.9 809,199 - +0.7 809,207 - -1.2 809,214 + +0.8 809,215 - -0.6 809,215 - +0.2 809,215 - -0.2 809,258 - +1.3 809,258 - -0.5 809,259 + +0.3 809,260 - -0.7 809,260 - -1.1 809,268 + +0.2 809,268 + -0.2 809,268 + +0.7 809,280 + +0.7 809,281 - -0.3 809,281 - +0.4 809,281 - +1.5 809,282 + -0.2 809,282 + -0.2 809,282 + +0.6 809,283 - +0.4 809,283 - +0.3 809,283 - -0.0 809,303 + -0.2 809,303 + +0.6 809,303 + +0.1 809,304 - -0.7 809,304 - +0.2 809,304 - -0.0 809,307 + -0.1 809,307 + -0.0 809,307 + +0.6 809,308 - +0.3 809,308 - +0.1 809,308 - -0.6 809,308 - -0.0 809,311 + +0.4 809,311 + +0.4 809,311 + +0.2 809,312 - +0.5 809,314 - -0.2 809,409 + +0.0 809,410 - -0.6 809,410 - -1.2 809,415 + +0.8 809,416 - -0.6 809,707 + IAI46_03710 0.29 -0.6 809,707 + IAI46_03710 0.29 +1.0 809,707 + IAI46_03710 0.29 -0.3 809,707 + IAI46_03710 0.29 -0.3 809,707 + IAI46_03710 0.29 -0.1 810,045 - IAI46_03710 0.52 -0.4
Or see this region's nucleotide sequence