Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00240 and IAI46_00245 overlap by 4 nucleotides IAI46_00245 and IAI46_00250 are separated by 476 nucleotides
IAI46_00240: IAI46_00240 - L-seryl-tRNA(Sec) selenium transferase, at 54,206 to 55,597
_00240
IAI46_00245: IAI46_00245 - selenocysteine-specific translation elongation factor, at 55,594 to 57,441
_00245
IAI46_00250: IAI46_00250 - MFS transporter, at 57,918 to 59,165
_00250
Position (kb) 55
56
57
58 Strain fitness (log2 ratio) -2
-1
0
1
2 at 54.615 kb on + strand, within IAI46_00240 at 54.615 kb on + strand, within IAI46_00240 at 54.616 kb on - strand, within IAI46_00240 at 54.616 kb on - strand, within IAI46_00240 at 54.616 kb on - strand, within IAI46_00240 at 54.616 kb on - strand, within IAI46_00240 at 54.616 kb on - strand, within IAI46_00240 at 54.618 kb on + strand, within IAI46_00240 at 54.883 kb on + strand, within IAI46_00240 at 54.883 kb on + strand, within IAI46_00240 at 54.883 kb on + strand, within IAI46_00240 at 54.883 kb on + strand, within IAI46_00240 at 54.884 kb on - strand, within IAI46_00240 at 54.884 kb on - strand, within IAI46_00240 at 54.894 kb on - strand, within IAI46_00240 at 55.013 kb on + strand, within IAI46_00240 at 55.014 kb on - strand, within IAI46_00240 at 55.014 kb on - strand, within IAI46_00240 at 55.064 kb on + strand, within IAI46_00240 at 55.218 kb on + strand, within IAI46_00240 at 55.219 kb on - strand, within IAI46_00240 at 55.266 kb on + strand, within IAI46_00240 at 55.266 kb on + strand, within IAI46_00240 at 55.273 kb on - strand, within IAI46_00240 at 55.424 kb on + strand, within IAI46_00240 at 55.425 kb on - strand, within IAI46_00240 at 55.425 kb on - strand, within IAI46_00240 at 55.522 kb on + strand at 55.599 kb on + strand at 55.599 kb on + strand at 55.600 kb on - strand at 55.600 kb on - strand at 55.600 kb on - strand at 55.605 kb on + strand at 55.706 kb on + strand at 55.706 kb on + strand at 55.706 kb on + strand at 55.706 kb on + strand at 55.706 kb on + strand at 55.707 kb on - strand at 55.707 kb on - strand at 55.707 kb on - strand at 55.707 kb on - strand at 55.707 kb on - strand at 55.707 kb on - strand at 55.717 kb on + strand at 55.723 kb on + strand at 55.758 kb on + strand at 55.758 kb on + strand at 55.794 kb on + strand, within IAI46_00245 at 55.794 kb on + strand, within IAI46_00245 at 55.795 kb on - strand, within IAI46_00245 at 55.795 kb on - strand, within IAI46_00245 at 56.301 kb on + strand, within IAI46_00245 at 56.301 kb on + strand, within IAI46_00245 at 56.301 kb on + strand, within IAI46_00245 at 56.301 kb on + strand, within IAI46_00245 at 56.302 kb on - strand, within IAI46_00245 at 56.302 kb on - strand, within IAI46_00245 at 56.302 kb on - strand, within IAI46_00245 at 56.313 kb on + strand, within IAI46_00245 at 56.317 kb on - strand, within IAI46_00245 at 56.317 kb on - strand, within IAI46_00245 at 56.408 kb on + strand, within IAI46_00245 at 56.408 kb on + strand, within IAI46_00245 at 56.409 kb on - strand, within IAI46_00245 at 56.409 kb on - strand, within IAI46_00245 at 56.412 kb on + strand, within IAI46_00245 at 56.413 kb on - strand, within IAI46_00245 at 56.413 kb on - strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.450 kb on + strand, within IAI46_00245 at 56.451 kb on - strand, within IAI46_00245 at 56.451 kb on - strand, within IAI46_00245 at 56.469 kb on + strand, within IAI46_00245 at 56.469 kb on + strand, within IAI46_00245 at 56.469 kb on + strand, within IAI46_00245 at 56.469 kb on + strand, within IAI46_00245 at 56.470 kb on - strand, within IAI46_00245 at 56.470 kb on - strand, within IAI46_00245 at 56.473 kb on - strand, within IAI46_00245 at 56.818 kb on - strand, within IAI46_00245 at 56.881 kb on + strand, within IAI46_00245 at 56.970 kb on + strand, within IAI46_00245 at 56.970 kb on + strand, within IAI46_00245 at 57.002 kb on + strand, within IAI46_00245 at 57.003 kb on - strand, within IAI46_00245 at 57.003 kb on - strand, within IAI46_00245 at 57.006 kb on + strand, within IAI46_00245 at 57.007 kb on - strand, within IAI46_00245 at 57.007 kb on - strand, within IAI46_00245 at 57.012 kb on + strand, within IAI46_00245 at 57.013 kb on - strand, within IAI46_00245 at 57.177 kb on + strand, within IAI46_00245 at 57.178 kb on - strand, within IAI46_00245 at 57.178 kb on - strand, within IAI46_00245 at 57.178 kb on - strand, within IAI46_00245 at 57.224 kb on - strand, within IAI46_00245 at 57.226 kb on + strand, within IAI46_00245 at 57.226 kb on + strand, within IAI46_00245 at 57.226 kb on + strand, within IAI46_00245 at 57.226 kb on + strand, within IAI46_00245 at 57.226 kb on + strand, within IAI46_00245 at 57.227 kb on - strand, within IAI46_00245 at 57.227 kb on - strand, within IAI46_00245 at 57.227 kb on - strand, within IAI46_00245 at 57.227 kb on - strand, within IAI46_00245 at 57.230 kb on + strand, within IAI46_00245 at 57.230 kb on + strand, within IAI46_00245 at 57.230 kb on + strand, within IAI46_00245 at 57.230 kb on + strand, within IAI46_00245 at 57.231 kb on - strand, within IAI46_00245 at 57.334 kb on - strand at 57.379 kb on - strand at 57.424 kb on + strand at 57.424 kb on + strand at 57.424 kb on + strand at 57.425 kb on - strand at 57.425 kb on - strand at 57.436 kb on - strand at 57.483 kb on + strand at 57.484 kb on - strand at 57.484 kb on - strand at 57.484 kb on - strand at 57.484 kb on - strand at 57.491 kb on + strand at 57.614 kb on + strand at 57.625 kb on - strand at 57.625 kb on - strand at 57.658 kb on + strand at 57.659 kb on - strand at 57.659 kb on - strand at 57.659 kb on - strand at 57.669 kb on + strand at 57.670 kb on - strand at 57.670 kb on - strand at 57.704 kb on + strand at 57.715 kb on + strand at 57.737 kb on + strand at 57.737 kb on + strand at 57.737 kb on + strand at 57.738 kb on - strand at 57.738 kb on - strand at 57.738 kb on - strand at 57.738 kb on - strand at 57.738 kb on - strand at 57.738 kb on - strand at 57.747 kb on + strand at 57.748 kb on - strand at 57.757 kb on + strand at 57.757 kb on + strand at 57.758 kb on - strand at 57.758 kb on - strand at 57.758 kb on - strand at 57.798 kb on + strand at 57.799 kb on - strand at 57.801 kb on + strand at 57.801 kb on + strand at 57.801 kb on + strand at 57.801 kb on + strand at 57.801 kb on + strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.802 kb on - strand at 57.811 kb on + strand at 57.812 kb on - strand at 57.813 kb on + strand at 57.814 kb on - strand at 57.842 kb on + strand at 57.843 kb on - strand at 57.848 kb on + strand at 57.848 kb on + strand at 57.849 kb on - strand at 57.849 kb on - strand at 57.860 kb on - strand at 57.860 kb on - strand at 57.883 kb on + strand at 57.919 kb on + strand at 57.919 kb on + strand at 57.921 kb on + strand at 57.922 kb on - strand at 57.932 kb on + strand at 58.051 kb on + strand, within IAI46_00250 at 58.052 kb on - strand, within IAI46_00250 at 58.052 kb on - strand, within IAI46_00250 at 58.052 kb on - strand, within IAI46_00250 at 58.052 kb on - strand, within IAI46_00250 at 58.098 kb on + strand, within IAI46_00250 at 58.098 kb on + strand, within IAI46_00250 at 58.098 kb on + strand, within IAI46_00250 at 58.098 kb on + strand, within IAI46_00250 at 58.099 kb on - strand, within IAI46_00250 at 58.099 kb on - strand, within IAI46_00250 at 58.099 kb on - strand, within IAI46_00250 at 58.099 kb on - strand, within IAI46_00250 at 58.099 kb on - strand, within IAI46_00250 at 58.198 kb on + strand, within IAI46_00250 at 58.198 kb on + strand, within IAI46_00250 at 58.198 kb on + strand, within IAI46_00250 at 58.228 kb on + strand, within IAI46_00250 at 58.228 kb on + strand, within IAI46_00250 at 58.228 kb on + strand, within IAI46_00250 at 58.228 kb on + strand, within IAI46_00250 at 58.229 kb on - strand, within IAI46_00250 at 58.229 kb on - strand, within IAI46_00250 at 58.229 kb on - strand, within IAI46_00250 at 58.229 kb on - strand, within IAI46_00250 at 58.229 kb on - strand, within IAI46_00250 at 58.245 kb on + strand, within IAI46_00250
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 54,615 + IAI46_00240 0.29 +0.6 54,615 + IAI46_00240 0.29 -0.5 54,616 - IAI46_00240 0.29 -0.3 54,616 - IAI46_00240 0.29 -0.2 54,616 - IAI46_00240 0.29 -0.1 54,616 - IAI46_00240 0.29 -0.3 54,616 - IAI46_00240 0.29 -0.5 54,618 + IAI46_00240 0.30 +0.4 54,883 + IAI46_00240 0.49 -0.2 54,883 + IAI46_00240 0.49 +0.2 54,883 + IAI46_00240 0.49 +0.4 54,883 + IAI46_00240 0.49 +0.4 54,884 - IAI46_00240 0.49 -1.8 54,884 - IAI46_00240 0.49 +0.1 54,894 - IAI46_00240 0.49 -0.9 55,013 + IAI46_00240 0.58 +0.5 55,014 - IAI46_00240 0.58 -0.7 55,014 - IAI46_00240 0.58 +0.7 55,064 + IAI46_00240 0.62 +0.3 55,218 + IAI46_00240 0.73 +0.6 55,219 - IAI46_00240 0.73 -0.2 55,266 + IAI46_00240 0.76 +0.7 55,266 + IAI46_00240 0.76 -0.3 55,273 - IAI46_00240 0.77 +0.6 55,424 + IAI46_00240 0.88 -0.5 55,425 - IAI46_00240 0.88 -0.4 55,425 - IAI46_00240 0.88 -0.1 55,522 + -1.2 55,599 + +0.1 55,599 + -0.6 55,600 - +0.1 55,600 - +0.2 55,600 - +0.2 55,605 + +0.3 55,706 + -0.4 55,706 + +0.6 55,706 + +0.6 55,706 + -0.6 55,706 + -1.0 55,707 - +1.8 55,707 - -0.9 55,707 - -1.4 55,707 - +0.6 55,707 - +1.8 55,707 - -1.2 55,717 + +0.9 55,723 + +1.2 55,758 + -0.4 55,758 + -1.0 55,794 + IAI46_00245 0.11 +0.0 55,794 + IAI46_00245 0.11 -0.3 55,795 - IAI46_00245 0.11 -1.8 55,795 - IAI46_00245 0.11 +0.3 56,301 + IAI46_00245 0.38 -0.2 56,301 + IAI46_00245 0.38 +0.2 56,301 + IAI46_00245 0.38 +0.6 56,301 + IAI46_00245 0.38 -0.8 56,302 - IAI46_00245 0.38 +0.5 56,302 - IAI46_00245 0.38 +0.7 56,302 - IAI46_00245 0.38 +0.0 56,313 + IAI46_00245 0.39 -0.1 56,317 - IAI46_00245 0.39 +0.1 56,317 - IAI46_00245 0.39 +0.3 56,408 + IAI46_00245 0.44 -0.8 56,408 + IAI46_00245 0.44 -0.4 56,409 - IAI46_00245 0.44 +0.8 56,409 - IAI46_00245 0.44 -0.3 56,412 + IAI46_00245 0.44 -0.3 56,413 - IAI46_00245 0.44 +0.2 56,413 - IAI46_00245 0.44 -0.1 56,450 + IAI46_00245 0.46 -0.0 56,450 + IAI46_00245 0.46 -0.4 56,450 + IAI46_00245 0.46 +1.9 56,450 + IAI46_00245 0.46 +0.5 56,450 + IAI46_00245 0.46 -0.6 56,450 + IAI46_00245 0.46 +0.5 56,450 + IAI46_00245 0.46 -0.4 56,450 + IAI46_00245 0.46 +0.6 56,451 - IAI46_00245 0.46 -0.2 56,451 - IAI46_00245 0.46 +0.4 56,469 + IAI46_00245 0.47 -1.1 56,469 + IAI46_00245 0.47 -0.9 56,469 + IAI46_00245 0.47 -0.6 56,469 + IAI46_00245 0.47 -1.5 56,470 - IAI46_00245 0.47 +0.2 56,470 - IAI46_00245 0.47 +0.5 56,473 - IAI46_00245 0.48 +0.3 56,818 - IAI46_00245 0.66 +0.7 56,881 + IAI46_00245 0.70 -0.2 56,970 + IAI46_00245 0.74 -0.8 56,970 + IAI46_00245 0.74 -0.3 57,002 + IAI46_00245 0.76 +0.0 57,003 - IAI46_00245 0.76 -0.8 57,003 - IAI46_00245 0.76 -0.3 57,006 + IAI46_00245 0.76 +0.6 57,007 - IAI46_00245 0.76 -0.1 57,007 - IAI46_00245 0.76 +0.2 57,012 + IAI46_00245 0.77 +0.9 57,013 - IAI46_00245 0.77 -0.3 57,177 + IAI46_00245 0.86 -0.1 57,178 - IAI46_00245 0.86 -0.2 57,178 - IAI46_00245 0.86 -0.7 57,178 - IAI46_00245 0.86 +0.5 57,224 - IAI46_00245 0.88 +0.4 57,226 + IAI46_00245 0.88 -0.1 57,226 + IAI46_00245 0.88 +0.3 57,226 + IAI46_00245 0.88 +0.0 57,226 + IAI46_00245 0.88 -0.9 57,226 + IAI46_00245 0.88 -0.6 57,227 - IAI46_00245 0.88 +0.2 57,227 - IAI46_00245 0.88 +0.6 57,227 - IAI46_00245 0.88 +1.3 57,227 - IAI46_00245 0.88 -0.6 57,230 + IAI46_00245 0.89 +0.5 57,230 + IAI46_00245 0.89 -0.2 57,230 + IAI46_00245 0.89 +0.1 57,230 + IAI46_00245 0.89 +0.4 57,231 - IAI46_00245 0.89 +0.8 57,334 - -0.0 57,379 - +0.6 57,424 + -0.2 57,424 + +2.0 57,424 + +0.7 57,425 - +0.5 57,425 - +0.7 57,436 - +0.1 57,483 + +0.2 57,484 - -1.5 57,484 - -0.6 57,484 - -0.3 57,484 - -2.1 57,491 + -0.6 57,614 + -0.2 57,625 - -1.3 57,625 - +0.3 57,658 + -0.4 57,659 - -0.3 57,659 - +0.3 57,659 - -0.7 57,669 + +0.7 57,670 - +0.8 57,670 - -0.6 57,704 + -0.4 57,715 + +0.3 57,737 + +0.6 57,737 + +0.5 57,737 + -0.0 57,738 - -1.5 57,738 - -0.5 57,738 - +0.1 57,738 - +0.6 57,738 - -0.1 57,738 - -0.0 57,747 + +0.4 57,748 - -0.7 57,757 + -0.7 57,757 + +0.2 57,758 - +0.0 57,758 - +0.7 57,758 - +0.3 57,798 + -0.5 57,799 - -0.0 57,801 + -2.4 57,801 + +1.1 57,801 + -0.7 57,801 + -0.5 57,801 + -0.4 57,802 - -0.4 57,802 - -0.7 57,802 - +0.8 57,802 - +0.8 57,802 - +0.9 57,802 - -0.4 57,802 - -0.3 57,802 - +1.2 57,802 - +0.3 57,802 - +0.4 57,811 + +0.4 57,812 - -0.2 57,813 + -0.6 57,814 - -0.2 57,842 + +0.1 57,843 - +0.8 57,848 + -0.2 57,848 + +0.1 57,849 - -0.9 57,849 - -0.1 57,860 - +0.8 57,860 - -0.2 57,883 + +0.1 57,919 + -0.7 57,919 + +0.1 57,921 + -0.1 57,922 - +0.7 57,932 + -0.2 58,051 + IAI46_00250 0.11 +0.6 58,052 - IAI46_00250 0.11 -0.7 58,052 - IAI46_00250 0.11 -0.1 58,052 - IAI46_00250 0.11 +0.6 58,052 - IAI46_00250 0.11 -0.5 58,098 + IAI46_00250 0.14 +0.6 58,098 + IAI46_00250 0.14 +1.1 58,098 + IAI46_00250 0.14 -0.5 58,098 + IAI46_00250 0.14 -1.4 58,099 - IAI46_00250 0.15 -1.1 58,099 - IAI46_00250 0.15 +0.3 58,099 - IAI46_00250 0.15 -0.1 58,099 - IAI46_00250 0.15 -0.9 58,099 - IAI46_00250 0.15 +0.2 58,198 + IAI46_00250 0.22 -0.6 58,198 + IAI46_00250 0.22 +0.8 58,198 + IAI46_00250 0.22 -0.4 58,228 + IAI46_00250 0.25 -0.9 58,228 + IAI46_00250 0.25 +0.2 58,228 + IAI46_00250 0.25 +0.4 58,228 + IAI46_00250 0.25 +0.7 58,229 - IAI46_00250 0.25 -0.3 58,229 - IAI46_00250 0.25 +0.6 58,229 - IAI46_00250 0.25 +1.3 58,229 - IAI46_00250 0.25 -0.2 58,229 - IAI46_00250 0.25 -0.8 58,245 + IAI46_00250 0.26 +0.9
Or see this region's nucleotide sequence