Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2342

Experiment: m.b. Nickel (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 2 mM
2,778,466	-				+0.4
2,778,519	+				-2.5
2,778,520	-				-0.3
2,778,528	+				-0.7
2,778,528	+				-0.6
2,778,529	-				+0.8
2,778,533	-				+0.5
2,778,533	-				-0.6
2,778,537	+				+0.1
2,778,538	-				-0.7
2,779,401	+				+0.3
2,779,440	+				-0.4
2,779,440	+				-0.6
2,779,440	+				+0.4
2,779,440	+				-0.3
2,779,440	+				-0.3
2,779,440	+				-1.2
2,779,440	+				-0.9
2,779,441	-				+0.6
2,779,441	-				-0.7
2,779,441	-				+1.0
2,779,478	+				+4.0
2,779,480	+				-0.8
2,779,515	+				+0.1
2,779,615	+		Echvi_2342	0.12	+0.3
2,779,690	-		Echvi_2342	0.17	+1.9
2,779,690	-		Echvi_2342	0.17	+0.3
2,779,783	+		Echvi_2342	0.25	+1.1
2,779,783	+		Echvi_2342	0.25	+0.2
2,779,783	+		Echvi_2342	0.25	+0.1
2,779,783	+		Echvi_2342	0.25	-0.7
2,779,881	+		Echvi_2342	0.32	-0.3
2,779,892	-		Echvi_2342	0.33	+1.1
2,779,910	+		Echvi_2342	0.34	-0.0
2,779,911	-		Echvi_2342	0.34	+1.7
2,779,911	-		Echvi_2342	0.34	-1.6
2,779,912	+		Echvi_2342	0.34	+0.9
2,779,912	+		Echvi_2342	0.34	-1.6
2,779,964	-		Echvi_2342	0.39	+0.3
2,779,964	-		Echvi_2342	0.39	-0.5
2,780,019	-		Echvi_2342	0.43	-0.5
2,780,019	-		Echvi_2342	0.43	-0.6
2,780,032	+		Echvi_2342	0.44	+0.4
2,780,035	-		Echvi_2342	0.44	+0.9
2,780,159	+		Echvi_2342	0.54	+0.1
2,780,190	-		Echvi_2342	0.56	-0.4
2,780,353	-		Echvi_2342	0.69	+0.2
2,780,391	+		Echvi_2342	0.72	+1.2
2,780,399	-		Echvi_2342	0.72	+0.9
2,780,432	+		Echvi_2342	0.75	+1.2
2,780,476	+		Echvi_2342	0.78	-1.3
2,780,540	+		Echvi_2342	0.83	+0.4
2,780,541	-		Echvi_2342	0.83	+0.2
2,780,625	-		Echvi_2342	0.90	+0.2
2,780,749	-				-1.1
2,780,823	+				+1.3
2,780,834	+				+0.4
2,780,834	+				-0.7
2,780,888	+				-1.0
2,780,889	-				+0.6
2,780,889	-				+0.7
2,780,889	-				-0.7
2,780,898	-				-0.2
2,780,913	-		Echvi_2343	0.12	+1.3
2,781,012	-		Echvi_2343	0.28	+0.0
2,781,012	-		Echvi_2343	0.28	-0.3
2,781,012	-		Echvi_2343	0.28	+0.1
2,781,028	-		Echvi_2343	0.31	-0.1
2,781,028	-		Echvi_2343	0.31	-1.5
2,781,028	-		Echvi_2343	0.31	-0.1
2,781,063	+		Echvi_2343	0.37	+0.7
2,781,064	-		Echvi_2343	0.37	+0.8
2,781,065	+		Echvi_2343	0.37	+0.6
2,781,066	-		Echvi_2343	0.37	+0.8
2,781,066	-		Echvi_2343	0.37	+0.4
2,781,187	+		Echvi_2343	0.57	+1.4
2,781,257	+		Echvi_2343	0.68	+0.4
2,781,258	-		Echvi_2343	0.68	-1.5
2,781,267	-		Echvi_2343	0.70	-1.6
2,781,291	-				+2.2
2,781,299	-		Echvi_2343	0.75	+0.1
2,781,350	+		Echvi_2343	0.83	-0.8
2,781,350	+		Echvi_2343	0.83	+0.1
2,781,351	-		Echvi_2343	0.84	+0.6