Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20450 and CA264_20455 are separated by 197 nucleotides CA264_20455 and CA264_20460 are separated by 280 nucleotides CA264_20460 and CA264_20465 are separated by 168 nucleotides
CA264_20450: CA264_20450 - hypothetical protein, at 4,712,745 to 4,714,223
_20450
CA264_20455: CA264_20455 - LLM class flavin-dependent oxidoreductase, at 4,714,421 to 4,715,464
_20455
CA264_20460: CA264_20460 - hypothetical protein, at 4,715,745 to 4,716,116
_20460
CA264_20465: CA264_20465 - aspartate carbamoyltransferase, at 4,716,285 to 4,717,208
_20465
Position (kb)
4714
4715
4716 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4713.584 kb on + strand, within CA264_20450 at 4713.632 kb on + strand, within CA264_20450 at 4713.695 kb on + strand, within CA264_20450 at 4713.736 kb on + strand, within CA264_20450 at 4713.803 kb on + strand, within CA264_20450 at 4713.886 kb on + strand, within CA264_20450 at 4713.897 kb on + strand, within CA264_20450 at 4713.898 kb on - strand, within CA264_20450 at 4713.919 kb on + strand, within CA264_20450 at 4713.920 kb on - strand, within CA264_20450 at 4713.940 kb on - strand, within CA264_20450 at 4714.041 kb on + strand, within CA264_20450 at 4714.092 kb on + strand at 4714.166 kb on - strand at 4714.215 kb on - strand at 4714.221 kb on + strand at 4714.230 kb on - strand at 4714.230 kb on - strand at 4714.230 kb on - strand at 4714.247 kb on - strand at 4714.418 kb on + strand at 4714.483 kb on - strand at 4714.520 kb on + strand at 4714.546 kb on - strand, within CA264_20455 at 4714.577 kb on + strand, within CA264_20455 at 4714.578 kb on - strand, within CA264_20455 at 4714.805 kb on + strand, within CA264_20455 at 4714.805 kb on + strand, within CA264_20455 at 4714.805 kb on + strand, within CA264_20455 at 4714.836 kb on + strand, within CA264_20455 at 4714.844 kb on + strand, within CA264_20455 at 4715.028 kb on + strand, within CA264_20455 at 4715.057 kb on - strand, within CA264_20455 at 4715.144 kb on + strand, within CA264_20455 at 4715.177 kb on - strand, within CA264_20455 at 4715.205 kb on + strand, within CA264_20455 at 4715.205 kb on + strand, within CA264_20455 at 4715.206 kb on - strand, within CA264_20455 at 4715.206 kb on - strand, within CA264_20455 at 4715.240 kb on + strand, within CA264_20455 at 4715.241 kb on - strand, within CA264_20455 at 4715.241 kb on - strand, within CA264_20455 at 4715.241 kb on - strand, within CA264_20455 at 4715.243 kb on - strand, within CA264_20455 at 4715.384 kb on + strand at 4715.384 kb on + strand at 4715.386 kb on + strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.477 kb on - strand at 4715.490 kb on + strand at 4715.515 kb on + strand at 4715.526 kb on + strand at 4715.527 kb on - strand at 4715.527 kb on - strand at 4715.529 kb on - strand at 4715.595 kb on + strand at 4715.595 kb on + strand at 4715.606 kb on - strand at 4715.606 kb on - strand at 4715.618 kb on + strand at 4715.619 kb on - strand at 4715.621 kb on + strand at 4715.622 kb on - strand at 4715.625 kb on + strand at 4715.649 kb on + strand at 4715.650 kb on - strand at 4715.771 kb on + strand at 4715.853 kb on + strand, within CA264_20460 at 4715.892 kb on - strand, within CA264_20460 at 4715.912 kb on + strand, within CA264_20460 at 4715.913 kb on - strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.030 kb on - strand, within CA264_20460 at 4716.105 kb on - strand at 4716.139 kb on - strand at 4716.257 kb on + strand at 4716.307 kb on + strand at 4716.312 kb on + strand at 4716.408 kb on - strand, within CA264_20465 at 4716.410 kb on + strand, within CA264_20465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,713,584 + CA264_20450 0.57 -1.0 4,713,632 + CA264_20450 0.60 -1.2 4,713,695 + CA264_20450 0.64 +0.8 4,713,736 + CA264_20450 0.67 -0.8 4,713,803 + CA264_20450 0.72 -0.6 4,713,886 + CA264_20450 0.77 -2.2 4,713,897 + CA264_20450 0.78 -0.3 4,713,898 - CA264_20450 0.78 +1.3 4,713,919 + CA264_20450 0.79 -0.9 4,713,920 - CA264_20450 0.79 +0.0 4,713,940 - CA264_20450 0.81 -0.2 4,714,041 + CA264_20450 0.88 +0.8 4,714,092 + -0.6 4,714,166 - -1.1 4,714,215 - -0.0 4,714,221 + +0.4 4,714,230 - -0.1 4,714,230 - +0.0 4,714,230 - -2.0 4,714,247 - -0.2 4,714,418 + +0.8 4,714,483 - -1.4 4,714,520 + -2.9 4,714,546 - CA264_20455 0.12 -2.4 4,714,577 + CA264_20455 0.15 -0.2 4,714,578 - CA264_20455 0.15 -1.4 4,714,805 + CA264_20455 0.37 -1.4 4,714,805 + CA264_20455 0.37 -1.5 4,714,805 + CA264_20455 0.37 -2.0 4,714,836 + CA264_20455 0.40 -1.7 4,714,844 + CA264_20455 0.41 -1.5 4,715,028 + CA264_20455 0.58 -0.1 4,715,057 - CA264_20455 0.61 -1.5 4,715,144 + CA264_20455 0.69 +0.1 4,715,177 - CA264_20455 0.72 -1.5 4,715,205 + CA264_20455 0.75 -0.5 4,715,205 + CA264_20455 0.75 -0.3 4,715,206 - CA264_20455 0.75 -1.1 4,715,206 - CA264_20455 0.75 -2.0 4,715,240 + CA264_20455 0.78 -1.1 4,715,241 - CA264_20455 0.79 -1.2 4,715,241 - CA264_20455 0.79 -1.0 4,715,241 - CA264_20455 0.79 -1.3 4,715,243 - CA264_20455 0.79 -2.1 4,715,384 + -0.4 4,715,384 + -0.4 4,715,386 + -0.4 4,715,387 - +0.8 4,715,387 - -1.4 4,715,387 - -0.3 4,715,387 - -1.1 4,715,387 - -1.4 4,715,477 - -0.8 4,715,490 + -1.2 4,715,515 + -0.8 4,715,526 + -1.2 4,715,527 - -0.9 4,715,527 - -0.9 4,715,529 - -0.2 4,715,595 + +1.9 4,715,595 + -1.5 4,715,606 - +1.3 4,715,606 - -0.6 4,715,618 + +0.1 4,715,619 - -1.4 4,715,621 + -0.7 4,715,622 - +1.6 4,715,625 + -0.5 4,715,649 + +0.1 4,715,650 - -1.5 4,715,771 + -1.5 4,715,853 + CA264_20460 0.29 -0.6 4,715,892 - CA264_20460 0.40 +0.2 4,715,912 + CA264_20460 0.45 -0.4 4,715,913 - CA264_20460 0.45 +0.0 4,716,029 + CA264_20460 0.76 +1.0 4,716,029 + CA264_20460 0.76 +0.3 4,716,030 - CA264_20460 0.77 -0.9 4,716,105 - -1.3 4,716,139 - +0.0 4,716,257 + +0.9 4,716,307 + -1.5 4,716,312 + +0.5 4,716,408 - CA264_20465 0.13 -0.5 4,716,410 + CA264_20465 0.14 -0.5
Or see this region's nucleotide sequence