Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19670 and CA264_19675 are separated by 93 nucleotides CA264_19675 and CA264_19680 are separated by 185 nucleotides
CA264_19670: CA264_19670 - NADPH:quinone oxidoreductase, at 4,541,588 to 4,542,568
_19670
CA264_19675: CA264_19675 - RNA pseudouridine synthase, at 4,542,662 to 4,543,372
_19675
CA264_19680: CA264_19680 - two-component sensor histidine kinase, at 4,543,558 to 4,544,598
_19680
Position (kb)
4542
4543
4544 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4541.682 kb on + strand at 4541.683 kb on - strand at 4541.688 kb on + strand, within CA264_19670 at 4541.689 kb on - strand, within CA264_19670 at 4541.766 kb on + strand, within CA264_19670 at 4541.767 kb on - strand, within CA264_19670 at 4541.767 kb on - strand, within CA264_19670 at 4541.767 kb on - strand, within CA264_19670 at 4541.808 kb on + strand, within CA264_19670 at 4541.809 kb on - strand, within CA264_19670 at 4541.815 kb on + strand, within CA264_19670 at 4541.836 kb on + strand, within CA264_19670 at 4541.841 kb on + strand, within CA264_19670 at 4541.842 kb on - strand, within CA264_19670 at 4541.887 kb on - strand, within CA264_19670 at 4542.022 kb on - strand, within CA264_19670 at 4542.042 kb on + strand, within CA264_19670 at 4542.405 kb on + strand, within CA264_19670 at 4542.485 kb on + strand at 4542.820 kb on + strand, within CA264_19675 at 4542.821 kb on - strand, within CA264_19675 at 4542.847 kb on - strand, within CA264_19675 at 4542.865 kb on - strand, within CA264_19675 at 4542.865 kb on - strand, within CA264_19675 at 4542.872 kb on - strand, within CA264_19675 at 4542.879 kb on - strand, within CA264_19675 at 4542.887 kb on - strand, within CA264_19675 at 4542.985 kb on + strand, within CA264_19675 at 4542.985 kb on + strand, within CA264_19675 at 4542.985 kb on + strand, within CA264_19675 at 4543.107 kb on + strand, within CA264_19675 at 4543.248 kb on - strand, within CA264_19675 at 4543.292 kb on - strand, within CA264_19675 at 4543.323 kb on + strand at 4543.341 kb on - strand at 4543.365 kb on + strand at 4543.365 kb on + strand at 4543.380 kb on + strand at 4543.381 kb on - strand at 4543.387 kb on + strand at 4543.430 kb on + strand at 4543.532 kb on + strand at 4543.560 kb on - strand at 4543.560 kb on - strand at 4543.940 kb on - strand, within CA264_19680 at 4544.247 kb on + strand, within CA264_19680 at 4544.248 kb on - strand, within CA264_19680 at 4544.367 kb on + strand, within CA264_19680
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,541,682 + -0.9 4,541,683 - +0.6 4,541,688 + CA264_19670 0.10 +0.2 4,541,689 - CA264_19670 0.10 -1.0 4,541,766 + CA264_19670 0.18 -1.0 4,541,767 - CA264_19670 0.18 -0.4 4,541,767 - CA264_19670 0.18 -1.0 4,541,767 - CA264_19670 0.18 +0.2 4,541,808 + CA264_19670 0.22 +0.5 4,541,809 - CA264_19670 0.23 -0.3 4,541,815 + CA264_19670 0.23 -0.9 4,541,836 + CA264_19670 0.25 -1.1 4,541,841 + CA264_19670 0.26 -0.5 4,541,842 - CA264_19670 0.26 +0.6 4,541,887 - CA264_19670 0.30 +0.3 4,542,022 - CA264_19670 0.44 +0.1 4,542,042 + CA264_19670 0.46 -0.4 4,542,405 + CA264_19670 0.83 +1.3 4,542,485 + -0.3 4,542,820 + CA264_19675 0.22 -3.5 4,542,821 - CA264_19675 0.22 -1.4 4,542,847 - CA264_19675 0.26 -2.0 4,542,865 - CA264_19675 0.29 -2.6 4,542,865 - CA264_19675 0.29 +0.5 4,542,872 - CA264_19675 0.30 -1.6 4,542,879 - CA264_19675 0.31 -3.3 4,542,887 - CA264_19675 0.32 -1.7 4,542,985 + CA264_19675 0.45 -0.4 4,542,985 + CA264_19675 0.45 -2.1 4,542,985 + CA264_19675 0.45 -3.3 4,543,107 + CA264_19675 0.63 -1.4 4,543,248 - CA264_19675 0.82 -3.2 4,543,292 - CA264_19675 0.89 +0.9 4,543,323 + -1.7 4,543,341 - -2.5 4,543,365 + -2.4 4,543,365 + +0.3 4,543,380 + -0.2 4,543,381 - +0.1 4,543,387 + -0.7 4,543,430 + -0.5 4,543,532 + -0.1 4,543,560 - -0.5 4,543,560 - -0.4 4,543,940 - CA264_19680 0.37 -0.0 4,544,247 + CA264_19680 0.66 -0.2 4,544,248 - CA264_19680 0.66 -1.6 4,544,367 + CA264_19680 0.78 +0.6
Or see this region's nucleotide sequence