Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19200 and CA264_19205 are separated by 1 nucleotides CA264_19205 and CA264_19210 are separated by 60 nucleotides
CA264_19200: CA264_19200 - glycosyl transferase, at 4,461,430 to 4,462,200
_19200
CA264_19205: CA264_19205 - hypothetical protein, at 4,462,202 to 4,463,296
_19205
CA264_19210: CA264_19210 - SAM-dependent methyltransferase, at 4,463,357 to 4,464,097
_19210
Position (kb)
4462
4463
4464 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4461.213 kb on - strand at 4461.244 kb on + strand at 4461.247 kb on - strand at 4461.293 kb on + strand at 4461.293 kb on + strand at 4461.312 kb on - strand at 4461.396 kb on - strand at 4461.411 kb on + strand at 4461.415 kb on - strand at 4461.415 kb on - strand at 4461.417 kb on + strand at 4461.429 kb on + strand at 4461.438 kb on - strand at 4461.477 kb on + strand at 4461.534 kb on - strand, within CA264_19200 at 4461.556 kb on - strand, within CA264_19200 at 4461.617 kb on + strand, within CA264_19200 at 4461.617 kb on + strand, within CA264_19200 at 4461.618 kb on - strand, within CA264_19200 at 4461.631 kb on + strand, within CA264_19200 at 4461.631 kb on + strand, within CA264_19200 at 4461.632 kb on - strand, within CA264_19200 at 4461.632 kb on - strand, within CA264_19200 at 4461.632 kb on - strand, within CA264_19200 at 4461.632 kb on - strand, within CA264_19200 at 4461.753 kb on + strand, within CA264_19200 at 4461.753 kb on + strand, within CA264_19200 at 4461.754 kb on - strand, within CA264_19200 at 4461.874 kb on - strand, within CA264_19200 at 4461.874 kb on - strand, within CA264_19200 at 4461.931 kb on + strand, within CA264_19200 at 4461.938 kb on - strand, within CA264_19200 at 4461.940 kb on + strand, within CA264_19200 at 4461.968 kb on + strand, within CA264_19200 at 4461.969 kb on - strand, within CA264_19200 at 4461.993 kb on + strand, within CA264_19200 at 4462.037 kb on + strand, within CA264_19200 at 4462.037 kb on + strand, within CA264_19200 at 4462.072 kb on + strand, within CA264_19200 at 4462.079 kb on + strand, within CA264_19200 at 4462.114 kb on - strand, within CA264_19200 at 4462.153 kb on + strand at 4462.166 kb on - strand at 4462.204 kb on - strand at 4462.205 kb on + strand at 4462.205 kb on + strand at 4462.206 kb on - strand at 4462.300 kb on + strand at 4462.301 kb on - strand at 4462.301 kb on - strand at 4462.352 kb on + strand, within CA264_19205 at 4462.352 kb on + strand, within CA264_19205 at 4462.353 kb on - strand, within CA264_19205 at 4462.353 kb on - strand, within CA264_19205 at 4462.353 kb on - strand, within CA264_19205 at 4462.353 kb on - strand, within CA264_19205 at 4462.540 kb on + strand, within CA264_19205 at 4462.593 kb on + strand, within CA264_19205 at 4462.593 kb on + strand, within CA264_19205 at 4462.594 kb on - strand, within CA264_19205 at 4462.661 kb on + strand, within CA264_19205 at 4462.678 kb on + strand, within CA264_19205 at 4462.682 kb on + strand, within CA264_19205 at 4462.690 kb on + strand, within CA264_19205 at 4462.690 kb on + strand, within CA264_19205 at 4462.692 kb on + strand, within CA264_19205 at 4462.692 kb on + strand, within CA264_19205 at 4462.692 kb on + strand, within CA264_19205 at 4462.693 kb on - strand, within CA264_19205 at 4462.693 kb on - strand, within CA264_19205 at 4462.757 kb on - strand, within CA264_19205 at 4462.829 kb on + strand, within CA264_19205 at 4462.863 kb on - strand, within CA264_19205 at 4462.866 kb on - strand, within CA264_19205 at 4462.914 kb on + strand, within CA264_19205 at 4462.914 kb on + strand, within CA264_19205 at 4462.915 kb on - strand, within CA264_19205 at 4462.920 kb on + strand, within CA264_19205 at 4462.926 kb on - strand, within CA264_19205 at 4462.976 kb on + strand, within CA264_19205 at 4462.977 kb on - strand, within CA264_19205 at 4462.977 kb on - strand, within CA264_19205 at 4463.017 kb on + strand, within CA264_19205 at 4463.077 kb on - strand, within CA264_19205 at 4463.103 kb on - strand, within CA264_19205 at 4463.160 kb on + strand, within CA264_19205 at 4463.161 kb on - strand, within CA264_19205 at 4463.164 kb on + strand, within CA264_19205 at 4463.165 kb on - strand, within CA264_19205 at 4463.165 kb on - strand, within CA264_19205 at 4463.228 kb on + strand at 4463.277 kb on - strand at 4463.285 kb on + strand at 4463.288 kb on + strand at 4463.289 kb on - strand at 4463.314 kb on + strand at 4463.314 kb on + strand at 4463.378 kb on + strand at 4463.379 kb on - strand at 4463.379 kb on - strand at 4463.379 kb on - strand at 4463.473 kb on + strand, within CA264_19210 at 4463.478 kb on + strand, within CA264_19210 at 4463.479 kb on - strand, within CA264_19210 at 4463.479 kb on - strand, within CA264_19210 at 4463.479 kb on - strand, within CA264_19210 at 4463.500 kb on - strand, within CA264_19210 at 4463.500 kb on - strand, within CA264_19210 at 4463.558 kb on + strand, within CA264_19210 at 4463.561 kb on + strand, within CA264_19210 at 4463.561 kb on + strand, within CA264_19210 at 4463.734 kb on + strand, within CA264_19210 at 4463.743 kb on + strand, within CA264_19210 at 4463.743 kb on + strand, within CA264_19210 at 4463.762 kb on + strand, within CA264_19210 at 4463.762 kb on + strand, within CA264_19210 at 4463.765 kb on + strand, within CA264_19210 at 4463.903 kb on + strand, within CA264_19210 at 4463.971 kb on + strand, within CA264_19210 at 4464.030 kb on - strand at 4464.064 kb on + strand at 4464.064 kb on + strand at 4464.141 kb on + strand at 4464.141 kb on + strand at 4464.142 kb on - strand at 4464.145 kb on + strand at 4464.146 kb on - strand at 4464.146 kb on - strand at 4464.146 kb on - strand at 4464.172 kb on - strand at 4464.175 kb on + strand at 4464.186 kb on - strand at 4464.186 kb on - strand at 4464.233 kb on - strand at 4464.236 kb on + strand at 4464.270 kb on - strand at 4464.270 kb on - strand at 4464.271 kb on + strand at 4464.279 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,461,213 - +1.1 4,461,244 + +2.3 4,461,247 - +0.2 4,461,293 + -1.3 4,461,293 + +0.5 4,461,312 - +0.9 4,461,396 - +0.7 4,461,411 + -0.3 4,461,415 - +0.5 4,461,415 - +0.2 4,461,417 + +0.2 4,461,429 + -1.5 4,461,438 - +0.5 4,461,477 + -4.5 4,461,534 - CA264_19200 0.13 +0.5 4,461,556 - CA264_19200 0.16 -3.2 4,461,617 + CA264_19200 0.24 -0.5 4,461,617 + CA264_19200 0.24 -1.3 4,461,618 - CA264_19200 0.24 +1.3 4,461,631 + CA264_19200 0.26 -0.1 4,461,631 + CA264_19200 0.26 -0.1 4,461,632 - CA264_19200 0.26 -3.1 4,461,632 - CA264_19200 0.26 -1.2 4,461,632 - CA264_19200 0.26 -2.4 4,461,632 - CA264_19200 0.26 +0.2 4,461,753 + CA264_19200 0.42 -2.2 4,461,753 + CA264_19200 0.42 -1.6 4,461,754 - CA264_19200 0.42 -1.0 4,461,874 - CA264_19200 0.58 -2.9 4,461,874 - CA264_19200 0.58 -0.6 4,461,931 + CA264_19200 0.65 -0.8 4,461,938 - CA264_19200 0.66 -4.0 4,461,940 + CA264_19200 0.66 -1.4 4,461,968 + CA264_19200 0.70 -0.1 4,461,969 - CA264_19200 0.70 -0.3 4,461,993 + CA264_19200 0.73 -1.1 4,462,037 + CA264_19200 0.79 -2.4 4,462,037 + CA264_19200 0.79 -3.2 4,462,072 + CA264_19200 0.83 -2.4 4,462,079 + CA264_19200 0.84 -1.5 4,462,114 - CA264_19200 0.89 -3.7 4,462,153 + -2.2 4,462,166 - -3.8 4,462,204 - -1.1 4,462,205 + +1.5 4,462,205 + -2.1 4,462,206 - -0.1 4,462,300 + -3.6 4,462,301 - -4.0 4,462,301 - -3.1 4,462,352 + CA264_19205 0.14 -0.9 4,462,352 + CA264_19205 0.14 -2.2 4,462,353 - CA264_19205 0.14 +0.5 4,462,353 - CA264_19205 0.14 +0.1 4,462,353 - CA264_19205 0.14 -1.2 4,462,353 - CA264_19205 0.14 -4.0 4,462,540 + CA264_19205 0.31 -1.1 4,462,593 + CA264_19205 0.36 -1.9 4,462,593 + CA264_19205 0.36 -2.6 4,462,594 - CA264_19205 0.36 -0.5 4,462,661 + CA264_19205 0.42 -4.2 4,462,678 + CA264_19205 0.43 -0.2 4,462,682 + CA264_19205 0.44 -3.6 4,462,690 + CA264_19205 0.45 -3.8 4,462,690 + CA264_19205 0.45 -2.7 4,462,692 + CA264_19205 0.45 -0.1 4,462,692 + CA264_19205 0.45 -2.8 4,462,692 + CA264_19205 0.45 -1.3 4,462,693 - CA264_19205 0.45 -0.9 4,462,693 - CA264_19205 0.45 -1.9 4,462,757 - CA264_19205 0.51 -1.7 4,462,829 + CA264_19205 0.57 +0.5 4,462,863 - CA264_19205 0.60 -3.0 4,462,866 - CA264_19205 0.61 -1.0 4,462,914 + CA264_19205 0.65 -1.7 4,462,914 + CA264_19205 0.65 -0.2 4,462,915 - CA264_19205 0.65 -0.1 4,462,920 + CA264_19205 0.66 -0.6 4,462,926 - CA264_19205 0.66 -2.8 4,462,976 + CA264_19205 0.71 -1.2 4,462,977 - CA264_19205 0.71 -1.5 4,462,977 - CA264_19205 0.71 -2.1 4,463,017 + CA264_19205 0.74 -0.8 4,463,077 - CA264_19205 0.80 -0.5 4,463,103 - CA264_19205 0.82 -3.4 4,463,160 + CA264_19205 0.87 -2.6 4,463,161 - CA264_19205 0.88 -4.2 4,463,164 + CA264_19205 0.88 -1.5 4,463,165 - CA264_19205 0.88 -4.4 4,463,165 - CA264_19205 0.88 -1.1 4,463,228 + -3.6 4,463,277 - -3.4 4,463,285 + -0.3 4,463,288 + -2.2 4,463,289 - -1.6 4,463,314 + +0.5 4,463,314 + -1.4 4,463,378 + +0.3 4,463,379 - +0.3 4,463,379 - -0.7 4,463,379 - -0.8 4,463,473 + CA264_19210 0.16 -1.0 4,463,478 + CA264_19210 0.16 +0.8 4,463,479 - CA264_19210 0.16 +0.1 4,463,479 - CA264_19210 0.16 -0.5 4,463,479 - CA264_19210 0.16 +0.1 4,463,500 - CA264_19210 0.19 +0.2 4,463,500 - CA264_19210 0.19 +0.2 4,463,558 + CA264_19210 0.27 +0.9 4,463,561 + CA264_19210 0.28 -0.5 4,463,561 + CA264_19210 0.28 +0.3 4,463,734 + CA264_19210 0.51 +0.1 4,463,743 + CA264_19210 0.52 -0.8 4,463,743 + CA264_19210 0.52 -0.4 4,463,762 + CA264_19210 0.55 -0.6 4,463,762 + CA264_19210 0.55 -0.6 4,463,765 + CA264_19210 0.55 -0.1 4,463,903 + CA264_19210 0.74 +0.6 4,463,971 + CA264_19210 0.83 -0.9 4,464,030 - +0.1 4,464,064 + -0.3 4,464,064 + -0.2 4,464,141 + +0.4 4,464,141 + -1.4 4,464,142 - +1.7 4,464,145 + -1.9 4,464,146 - -0.8 4,464,146 - -0.0 4,464,146 - -0.6 4,464,172 - +0.9 4,464,175 + -0.7 4,464,186 - -0.5 4,464,186 - -0.4 4,464,233 - -1.0 4,464,236 + -0.9 4,464,270 - +0.0 4,464,270 - -0.4 4,464,271 + -0.1 4,464,279 + -0.8
Or see this region's nucleotide sequence