Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19185 and CA264_19190 are separated by 130 nucleotides CA264_19190 and CA264_19195 are separated by 29 nucleotides
CA264_19185: CA264_19185 - adenosylhomocysteinase, at 4,455,956 to 4,457,263
_19185
CA264_19190: CA264_19190 - DNA-binding response regulator, at 4,457,394 to 4,458,140
_19190
CA264_19195: CA264_19195 - hypothetical protein, at 4,458,170 to 4,461,142
_19195
Position (kb)
4457
4458
4459 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4457.262 kb on - strand at 4457.284 kb on + strand at 4457.369 kb on + strand at 4457.381 kb on + strand at 4457.381 kb on + strand at 4457.381 kb on + strand at 4457.382 kb on - strand at 4457.397 kb on + strand at 4457.397 kb on + strand at 4457.399 kb on + strand at 4457.399 kb on + strand at 4457.399 kb on + strand at 4457.400 kb on - strand at 4457.400 kb on - strand at 4457.411 kb on + strand at 4457.411 kb on + strand at 4457.412 kb on - strand at 4457.431 kb on + strand at 4457.432 kb on - strand at 4457.432 kb on - strand at 4457.493 kb on + strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.556 kb on - strand, within CA264_19190 at 4457.556 kb on - strand, within CA264_19190 at 4457.583 kb on + strand, within CA264_19190 at 4457.584 kb on - strand, within CA264_19190 at 4457.590 kb on + strand, within CA264_19190 at 4457.591 kb on - strand, within CA264_19190 at 4457.612 kb on + strand, within CA264_19190 at 4457.620 kb on + strand, within CA264_19190 at 4457.620 kb on + strand, within CA264_19190 at 4457.682 kb on + strand, within CA264_19190 at 4457.698 kb on + strand, within CA264_19190 at 4457.709 kb on + strand, within CA264_19190 at 4457.769 kb on - strand, within CA264_19190 at 4457.902 kb on + strand, within CA264_19190 at 4457.903 kb on - strand, within CA264_19190 at 4457.907 kb on - strand, within CA264_19190 at 4457.975 kb on + strand, within CA264_19190 at 4457.976 kb on - strand, within CA264_19190 at 4458.021 kb on + strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.024 kb on - strand, within CA264_19190 at 4458.024 kb on - strand, within CA264_19190 at 4458.042 kb on + strand, within CA264_19190 at 4458.043 kb on - strand, within CA264_19190 at 4458.043 kb on - strand, within CA264_19190 at 4458.147 kb on - strand at 4458.261 kb on - strand at 4458.263 kb on + strand at 4458.264 kb on - strand at 4458.269 kb on - strand at 4458.351 kb on + strand at 4458.418 kb on - strand at 4458.438 kb on - strand at 4458.476 kb on + strand, within CA264_19195 at 4458.477 kb on - strand, within CA264_19195 at 4458.477 kb on - strand, within CA264_19195 at 4458.488 kb on + strand, within CA264_19195 at 4458.526 kb on + strand, within CA264_19195 at 4458.527 kb on - strand, within CA264_19195 at 4458.537 kb on + strand, within CA264_19195 at 4458.574 kb on - strand, within CA264_19195 at 4458.590 kb on - strand, within CA264_19195 at 4458.637 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.669 kb on - strand, within CA264_19195 at 4458.922 kb on + strand, within CA264_19195 at 4458.923 kb on - strand, within CA264_19195 at 4458.966 kb on + strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.114 kb on + strand, within CA264_19195 at 4459.114 kb on + strand, within CA264_19195 at 4459.117 kb on - strand, within CA264_19195 at 4459.117 kb on - strand, within CA264_19195 at 4459.122 kb on - strand, within CA264_19195
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,457,262 - +0.4 4,457,284 + -1.3 4,457,369 + +0.4 4,457,381 + +0.1 4,457,381 + +0.1 4,457,381 + +0.5 4,457,382 - -0.3 4,457,397 + -0.6 4,457,397 + -0.4 4,457,399 + +0.5 4,457,399 + -0.1 4,457,399 + -0.2 4,457,400 - -0.6 4,457,400 - -0.8 4,457,411 + -0.0 4,457,411 + -0.4 4,457,412 - -0.2 4,457,431 + +0.3 4,457,432 - +0.7 4,457,432 - +0.2 4,457,493 + CA264_19190 0.13 +0.3 4,457,494 - CA264_19190 0.13 -0.5 4,457,494 - CA264_19190 0.13 +0.5 4,457,494 - CA264_19190 0.13 -0.3 4,457,555 + CA264_19190 0.22 -1.0 4,457,555 + CA264_19190 0.22 +0.0 4,457,555 + CA264_19190 0.22 +0.9 4,457,555 + CA264_19190 0.22 -0.8 4,457,555 + CA264_19190 0.22 -0.1 4,457,556 - CA264_19190 0.22 -0.4 4,457,556 - CA264_19190 0.22 -0.0 4,457,583 + CA264_19190 0.25 -1.2 4,457,584 - CA264_19190 0.25 -0.1 4,457,590 + CA264_19190 0.26 +0.6 4,457,591 - CA264_19190 0.26 -0.3 4,457,612 + CA264_19190 0.29 -0.6 4,457,620 + CA264_19190 0.30 -0.3 4,457,620 + CA264_19190 0.30 +0.6 4,457,682 + CA264_19190 0.39 -0.6 4,457,698 + CA264_19190 0.41 -1.0 4,457,709 + CA264_19190 0.42 -0.0 4,457,769 - CA264_19190 0.50 -0.5 4,457,902 + CA264_19190 0.68 -0.7 4,457,903 - CA264_19190 0.68 +0.4 4,457,907 - CA264_19190 0.69 +0.9 4,457,975 + CA264_19190 0.78 +0.7 4,457,976 - CA264_19190 0.78 -0.6 4,458,021 + CA264_19190 0.84 +0.2 4,458,022 - CA264_19190 0.84 -0.1 4,458,022 - CA264_19190 0.84 -0.2 4,458,022 - CA264_19190 0.84 -1.2 4,458,022 - CA264_19190 0.84 -0.3 4,458,023 + CA264_19190 0.84 +0.9 4,458,023 + CA264_19190 0.84 -0.0 4,458,023 + CA264_19190 0.84 -0.1 4,458,024 - CA264_19190 0.84 -0.7 4,458,024 - CA264_19190 0.84 +0.2 4,458,042 + CA264_19190 0.87 -0.5 4,458,043 - CA264_19190 0.87 +1.6 4,458,043 - CA264_19190 0.87 +2.5 4,458,147 - +0.2 4,458,261 - +0.6 4,458,263 + +0.8 4,458,264 - +0.5 4,458,269 - -2.1 4,458,351 + +0.5 4,458,418 - +0.0 4,458,438 - +0.0 4,458,476 + CA264_19195 0.10 -0.4 4,458,477 - CA264_19195 0.10 +0.5 4,458,477 - CA264_19195 0.10 +1.3 4,458,488 + CA264_19195 0.11 +0.2 4,458,526 + CA264_19195 0.12 -0.1 4,458,527 - CA264_19195 0.12 -0.4 4,458,537 + CA264_19195 0.12 +0.1 4,458,574 - CA264_19195 0.14 -0.9 4,458,590 - CA264_19195 0.14 +0.5 4,458,637 + CA264_19195 0.16 +0.2 4,458,668 + CA264_19195 0.17 +0.5 4,458,668 + CA264_19195 0.17 +0.1 4,458,668 + CA264_19195 0.17 +0.7 4,458,668 + CA264_19195 0.17 +0.3 4,458,669 - CA264_19195 0.17 -1.1 4,458,922 + CA264_19195 0.25 -0.4 4,458,923 - CA264_19195 0.25 +1.3 4,458,966 + CA264_19195 0.27 +0.2 4,459,111 - CA264_19195 0.32 +0.0 4,459,111 - CA264_19195 0.32 -0.0 4,459,111 - CA264_19195 0.32 -0.3 4,459,111 - CA264_19195 0.32 -0.2 4,459,114 + CA264_19195 0.32 -0.6 4,459,114 + CA264_19195 0.32 +0.1 4,459,117 - CA264_19195 0.32 +0.4 4,459,117 - CA264_19195 0.32 +0.1 4,459,122 - CA264_19195 0.32 -1.1
Or see this region's nucleotide sequence