Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18325 and CA264_18330 are separated by 169 nucleotides CA264_18330 and CA264_18335 are separated by 160 nucleotides CA264_18335 and CA264_18340 are separated by 259 nucleotides
CA264_18325: CA264_18325 - MarR family transcriptional regulator, at 4,260,870 to 4,261,319
_18325
CA264_18330: CA264_18330 - hypothetical protein, at 4,261,489 to 4,261,938
_18330
CA264_18335: CA264_18335 - peptidase M16, at 4,262,099 to 4,263,358
_18335
CA264_18340: CA264_18340 - dehydrogenase, at 4,263,618 to 4,265,597
_18340
Position (kb)
4262
4263
4264 Strain fitness (log2 ratio)
-2
-1
0
1 at 4261.299 kb on + strand at 4261.312 kb on - strand at 4261.334 kb on - strand at 4261.399 kb on - strand at 4261.399 kb on - strand at 4261.399 kb on - strand at 4261.402 kb on + strand at 4261.403 kb on - strand at 4261.404 kb on + strand at 4261.422 kb on - strand at 4261.467 kb on + strand at 4261.574 kb on - strand, within CA264_18330 at 4261.603 kb on + strand, within CA264_18330 at 4261.603 kb on + strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.694 kb on + strand, within CA264_18330 at 4261.739 kb on + strand, within CA264_18330 at 4261.772 kb on + strand, within CA264_18330 at 4261.853 kb on - strand, within CA264_18330 at 4261.953 kb on - strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.080 kb on + strand at 4262.080 kb on + strand at 4262.081 kb on - strand at 4262.081 kb on - strand at 4262.136 kb on + strand at 4262.265 kb on + strand, within CA264_18335 at 4262.468 kb on + strand, within CA264_18335 at 4262.468 kb on + strand, within CA264_18335 at 4262.469 kb on - strand, within CA264_18335 at 4262.532 kb on + strand, within CA264_18335 at 4262.561 kb on + strand, within CA264_18335 at 4262.620 kb on - strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.799 kb on - strand, within CA264_18335 at 4262.817 kb on + strand, within CA264_18335 at 4262.818 kb on - strand, within CA264_18335 at 4262.867 kb on - strand, within CA264_18335 at 4262.902 kb on - strand, within CA264_18335 at 4262.916 kb on + strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.967 kb on + strand, within CA264_18335 at 4262.993 kb on + strand, within CA264_18335 at 4263.043 kb on + strand, within CA264_18335 at 4263.044 kb on - strand, within CA264_18335 at 4263.102 kb on + strand, within CA264_18335 at 4263.103 kb on - strand, within CA264_18335 at 4263.103 kb on - strand, within CA264_18335 at 4263.264 kb on + strand at 4263.269 kb on + strand at 4263.270 kb on - strand at 4263.328 kb on + strand at 4263.329 kb on - strand at 4263.354 kb on - strand at 4263.359 kb on - strand at 4263.359 kb on - strand at 4263.365 kb on + strand at 4263.366 kb on - strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.387 kb on + strand at 4263.388 kb on - strand at 4263.436 kb on + strand at 4263.436 kb on + strand at 4263.459 kb on - strand at 4263.461 kb on - strand at 4263.482 kb on + strand at 4263.509 kb on + strand at 4263.516 kb on + strand at 4263.516 kb on + strand at 4263.516 kb on + strand at 4263.517 kb on - strand at 4263.517 kb on - strand at 4263.547 kb on + strand at 4263.553 kb on + strand at 4263.555 kb on + strand at 4263.566 kb on + strand at 4263.595 kb on + strand at 4263.595 kb on + strand at 4263.595 kb on + strand at 4263.596 kb on - strand at 4263.624 kb on + strand at 4263.624 kb on + strand at 4263.625 kb on - strand at 4263.625 kb on - strand at 4263.639 kb on + strand at 4263.659 kb on - strand at 4263.664 kb on + strand at 4263.664 kb on + strand at 4263.665 kb on - strand at 4263.666 kb on + strand at 4263.666 kb on + strand at 4263.675 kb on - strand at 4263.807 kb on + strand at 4264.270 kb on - strand, within CA264_18340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,261,299 + +0.8 4,261,312 - +0.7 4,261,334 - -0.5 4,261,399 - +0.6 4,261,399 - +0.7 4,261,399 - -0.6 4,261,402 + -0.1 4,261,403 - +0.3 4,261,404 + -0.4 4,261,422 - +0.3 4,261,467 + +0.9 4,261,574 - CA264_18330 0.19 +0.9 4,261,603 + CA264_18330 0.25 -0.3 4,261,603 + CA264_18330 0.25 +0.4 4,261,661 - CA264_18330 0.38 -0.5 4,261,661 - CA264_18330 0.38 +1.3 4,261,661 - CA264_18330 0.38 -0.3 4,261,694 + CA264_18330 0.46 -0.5 4,261,739 + CA264_18330 0.56 -0.6 4,261,772 + CA264_18330 0.63 +0.1 4,261,853 - CA264_18330 0.81 -0.5 4,261,953 - +0.6 4,262,031 + +1.0 4,262,031 + -1.5 4,262,031 + -1.3 4,262,031 + +1.2 4,262,080 + +0.3 4,262,080 + -0.0 4,262,081 - -1.3 4,262,081 - +0.8 4,262,136 + -0.4 4,262,265 + CA264_18335 0.13 -1.5 4,262,468 + CA264_18335 0.29 -0.3 4,262,468 + CA264_18335 0.29 -0.1 4,262,469 - CA264_18335 0.29 +1.0 4,262,532 + CA264_18335 0.34 -0.6 4,262,561 + CA264_18335 0.37 -1.7 4,262,620 - CA264_18335 0.41 +1.0 4,262,628 + CA264_18335 0.42 +0.2 4,262,628 + CA264_18335 0.42 -0.3 4,262,629 - CA264_18335 0.42 -0.5 4,262,629 - CA264_18335 0.42 -1.3 4,262,657 + CA264_18335 0.44 -0.1 4,262,657 + CA264_18335 0.44 -0.2 4,262,713 - CA264_18335 0.49 +0.3 4,262,713 - CA264_18335 0.49 -0.2 4,262,713 - CA264_18335 0.49 +1.4 4,262,799 - CA264_18335 0.56 -0.3 4,262,817 + CA264_18335 0.57 -0.5 4,262,818 - CA264_18335 0.57 +0.7 4,262,867 - CA264_18335 0.61 -0.1 4,262,902 - CA264_18335 0.64 +0.1 4,262,916 + CA264_18335 0.65 -0.3 4,262,917 - CA264_18335 0.65 -1.5 4,262,917 - CA264_18335 0.65 +0.1 4,262,967 + CA264_18335 0.69 -0.8 4,262,993 + CA264_18335 0.71 -0.6 4,263,043 + CA264_18335 0.75 +0.7 4,263,044 - CA264_18335 0.75 +1.0 4,263,102 + CA264_18335 0.80 -0.1 4,263,103 - CA264_18335 0.80 +0.0 4,263,103 - CA264_18335 0.80 -0.5 4,263,264 + -1.8 4,263,269 + -0.4 4,263,270 - -0.5 4,263,328 + -0.7 4,263,329 - -0.3 4,263,354 - -0.4 4,263,359 - -0.1 4,263,359 - -0.1 4,263,365 + +0.6 4,263,366 - -1.0 4,263,383 + -0.1 4,263,383 + +1.0 4,263,383 + +0.9 4,263,383 + -1.9 4,263,383 + -1.0 4,263,383 + -0.6 4,263,383 + -0.0 4,263,384 - -0.2 4,263,384 - +0.1 4,263,384 - -0.1 4,263,384 - -0.4 4,263,384 - -0.5 4,263,387 + -0.6 4,263,388 - -1.5 4,263,436 + -0.2 4,263,436 + -0.7 4,263,459 - -1.5 4,263,461 - +0.8 4,263,482 + +1.2 4,263,509 + -1.2 4,263,516 + +0.9 4,263,516 + +0.7 4,263,516 + -0.8 4,263,517 - -0.6 4,263,517 - +0.5 4,263,547 + +0.4 4,263,553 + +1.2 4,263,555 + -0.4 4,263,566 + -0.0 4,263,595 + -0.3 4,263,595 + -2.2 4,263,595 + +0.7 4,263,596 - -0.1 4,263,624 + -0.7 4,263,624 + +1.0 4,263,625 - -0.4 4,263,625 - -1.3 4,263,639 + -0.5 4,263,659 - -0.8 4,263,664 + -1.0 4,263,664 + -0.0 4,263,665 - -0.1 4,263,666 + -1.7 4,263,666 + -0.9 4,263,675 - -0.9 4,263,807 + -1.9 4,264,270 - CA264_18340 0.33 -0.6
Or see this region's nucleotide sequence