Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18300 and CA264_18305 are separated by 108 nucleotides CA264_18305 and CA264_18310 are separated by 307 nucleotides CA264_18310 and CA264_18315 are separated by 429 nucleotides
CA264_18300: CA264_18300 - peptidase M28, at 4,255,782 to 4,257,338
_18300
CA264_18305: CA264_18305 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 4,257,447 to 4,257,932
_18305
CA264_18310: CA264_18310 - hypothetical protein, at 4,258,240 to 4,258,374
_18310
CA264_18315: CA264_18315 - alkene reductase, at 4,258,804 to 4,259,907
_18315
Position (kb)
4258
4259 Strain fitness (log2 ratio)
-1
0
1 at 4257.330 kb on - strand at 4257.338 kb on + strand at 4257.338 kb on + strand at 4257.339 kb on - strand at 4257.391 kb on - strand at 4257.445 kb on + strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.449 kb on - strand at 4257.945 kb on - strand at 4257.945 kb on - strand at 4257.945 kb on - strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.948 kb on + strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.949 kb on - strand at 4257.955 kb on + strand at 4257.955 kb on + strand at 4257.955 kb on + strand at 4257.958 kb on + strand at 4257.992 kb on + strand at 4257.992 kb on + strand at 4257.993 kb on - strand at 4257.993 kb on - strand at 4257.996 kb on + strand at 4257.997 kb on - strand at 4258.008 kb on - strand at 4258.019 kb on + strand at 4258.019 kb on + strand at 4258.019 kb on + strand at 4258.020 kb on - strand at 4258.043 kb on + strand at 4258.062 kb on - strand at 4258.066 kb on + strand at 4258.151 kb on - strand at 4258.173 kb on + strand at 4258.235 kb on + strand at 4258.235 kb on + strand at 4258.236 kb on - strand at 4258.373 kb on - strand at 4258.385 kb on - strand at 4258.388 kb on + strand at 4258.413 kb on - strand at 4258.432 kb on - strand at 4258.432 kb on - strand at 4258.435 kb on + strand at 4258.436 kb on - strand at 4258.437 kb on + strand at 4258.437 kb on + strand at 4258.437 kb on + strand at 4258.438 kb on - strand at 4258.506 kb on + strand at 4258.507 kb on - strand at 4258.507 kb on - strand at 4258.548 kb on + strand at 4258.658 kb on + strand at 4258.659 kb on - strand at 4258.659 kb on - strand at 4258.663 kb on - strand at 4258.704 kb on + strand at 4258.704 kb on + strand at 4258.705 kb on - strand at 4258.706 kb on + strand at 4258.707 kb on - strand at 4258.722 kb on + strand at 4258.723 kb on - strand at 4258.782 kb on + strand at 4258.783 kb on - strand at 4258.784 kb on + strand at 4258.787 kb on - strand at 4258.841 kb on + strand at 4258.869 kb on + strand at 4259.004 kb on + strand, within CA264_18315 at 4259.036 kb on + strand, within CA264_18315 at 4259.036 kb on + strand, within CA264_18315 at 4259.089 kb on + strand, within CA264_18315 at 4259.089 kb on + strand, within CA264_18315 at 4259.090 kb on - strand, within CA264_18315 at 4259.090 kb on - strand, within CA264_18315 at 4259.157 kb on - strand, within CA264_18315 at 4259.251 kb on + strand, within CA264_18315 at 4259.334 kb on + strand, within CA264_18315 at 4259.335 kb on - strand, within CA264_18315 at 4259.335 kb on - strand, within CA264_18315
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,257,330 - -0.0 4,257,338 + -0.8 4,257,338 + +0.7 4,257,339 - -1.4 4,257,391 - -0.5 4,257,445 + +0.4 4,257,449 - -0.1 4,257,449 - -0.1 4,257,449 - +0.0 4,257,449 - -1.0 4,257,945 - +0.2 4,257,945 - +0.0 4,257,945 - -0.4 4,257,948 + +0.5 4,257,948 + -0.8 4,257,948 + +0.8 4,257,948 + -0.5 4,257,948 + -1.1 4,257,949 - -0.3 4,257,949 - -0.1 4,257,949 - -0.4 4,257,949 - -1.1 4,257,949 - -0.6 4,257,955 + +0.2 4,257,955 + +0.2 4,257,955 + -0.3 4,257,958 + -0.1 4,257,992 + -0.2 4,257,992 + +0.2 4,257,993 - -0.1 4,257,993 - -0.5 4,257,996 + -0.8 4,257,997 - -0.1 4,258,008 - -0.7 4,258,019 + +0.4 4,258,019 + -0.7 4,258,019 + +0.2 4,258,020 - -0.6 4,258,043 + -1.1 4,258,062 - -1.0 4,258,066 + -0.3 4,258,151 - +0.3 4,258,173 + +0.5 4,258,235 + +0.3 4,258,235 + +0.2 4,258,236 - -0.1 4,258,373 - +0.4 4,258,385 - -0.2 4,258,388 + +0.8 4,258,413 - +0.6 4,258,432 - -0.0 4,258,432 - +0.0 4,258,435 + +0.7 4,258,436 - -0.5 4,258,437 + -0.4 4,258,437 + +0.8 4,258,437 + +0.0 4,258,438 - -0.5 4,258,506 + +0.5 4,258,507 - -0.3 4,258,507 - -0.0 4,258,548 + +0.3 4,258,658 + +0.2 4,258,659 - -0.7 4,258,659 - -0.9 4,258,663 - +1.6 4,258,704 + +0.1 4,258,704 + +0.3 4,258,705 - +0.9 4,258,706 + +0.2 4,258,707 - +1.3 4,258,722 + +1.3 4,258,723 - +0.3 4,258,782 + +0.6 4,258,783 - +0.4 4,258,784 + -0.7 4,258,787 - +0.4 4,258,841 + -0.4 4,258,869 + +0.1 4,259,004 + CA264_18315 0.18 -0.6 4,259,036 + CA264_18315 0.21 +0.6 4,259,036 + CA264_18315 0.21 -0.7 4,259,089 + CA264_18315 0.26 +1.2 4,259,089 + CA264_18315 0.26 -0.6 4,259,090 - CA264_18315 0.26 +0.5 4,259,090 - CA264_18315 0.26 -1.0 4,259,157 - CA264_18315 0.32 -1.3 4,259,251 + CA264_18315 0.40 -0.4 4,259,334 + CA264_18315 0.48 +0.0 4,259,335 - CA264_18315 0.48 +0.1 4,259,335 - CA264_18315 0.48 +0.2
Or see this region's nucleotide sequence