Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17960 and CA264_17965 are separated by 271 nucleotides CA264_17965 and CA264_17970 are separated by 24 nucleotides
CA264_17960: CA264_17960 - proline--tRNA ligase, at 4,173,294 to 4,174,772
_17960
CA264_17965: CA264_17965 - hypothetical protein, at 4,175,044 to 4,176,150
_17965
CA264_17970: CA264_17970 - hypothetical protein, at 4,176,175 to 4,177,713
_17970
Position (kb)
4175
4176
4177 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 4174.793 kb on + strand at 4174.793 kb on + strand at 4174.793 kb on + strand at 4174.794 kb on - strand at 4174.879 kb on + strand at 4174.880 kb on - strand at 4174.880 kb on - strand at 4174.882 kb on - strand at 4174.882 kb on - strand at 4174.882 kb on - strand at 4174.882 kb on - strand at 4174.886 kb on + strand at 4174.889 kb on + strand at 4174.919 kb on + strand at 4174.930 kb on + strand at 4174.930 kb on + strand at 4174.940 kb on + strand at 4175.060 kb on - strand at 4175.071 kb on + strand at 4175.071 kb on + strand at 4175.071 kb on + strand at 4175.071 kb on + strand at 4175.072 kb on - strand at 4175.098 kb on + strand at 4175.099 kb on - strand at 4175.143 kb on + strand at 4175.144 kb on - strand at 4175.215 kb on - strand, within CA264_17965 at 4175.326 kb on + strand, within CA264_17965 at 4175.326 kb on + strand, within CA264_17965 at 4175.327 kb on - strand, within CA264_17965 at 4175.347 kb on + strand, within CA264_17965 at 4175.348 kb on - strand, within CA264_17965 at 4175.382 kb on + strand, within CA264_17965 at 4175.395 kb on + strand, within CA264_17965 at 4175.396 kb on - strand, within CA264_17965 at 4175.396 kb on - strand, within CA264_17965 at 4175.399 kb on - strand, within CA264_17965 at 4175.482 kb on + strand, within CA264_17965 at 4175.497 kb on + strand, within CA264_17965 at 4175.530 kb on - strand, within CA264_17965 at 4175.540 kb on - strand, within CA264_17965 at 4175.542 kb on + strand, within CA264_17965 at 4175.543 kb on - strand, within CA264_17965 at 4175.543 kb on - strand, within CA264_17965 at 4175.554 kb on + strand, within CA264_17965 at 4175.555 kb on - strand, within CA264_17965 at 4175.575 kb on + strand, within CA264_17965 at 4175.602 kb on + strand, within CA264_17965 at 4175.647 kb on + strand, within CA264_17965 at 4175.791 kb on - strand, within CA264_17965 at 4175.795 kb on + strand, within CA264_17965 at 4175.854 kb on - strand, within CA264_17965 at 4175.976 kb on + strand, within CA264_17965 at 4176.038 kb on - strand, within CA264_17965 at 4176.148 kb on + strand at 4176.168 kb on - strand at 4176.262 kb on + strand at 4176.394 kb on - strand, within CA264_17970 at 4176.448 kb on - strand, within CA264_17970 at 4176.594 kb on + strand, within CA264_17970 at 4176.635 kb on + strand, within CA264_17970 at 4176.635 kb on + strand, within CA264_17970 at 4176.636 kb on - strand, within CA264_17970 at 4176.638 kb on + strand, within CA264_17970 at 4176.639 kb on - strand, within CA264_17970 at 4176.639 kb on - strand, within CA264_17970 at 4176.639 kb on - strand, within CA264_17970 at 4176.643 kb on + strand, within CA264_17970 at 4176.644 kb on - strand, within CA264_17970 at 4176.656 kb on + strand at 4176.714 kb on + strand, within CA264_17970 at 4176.715 kb on - strand, within CA264_17970 at 4176.715 kb on - strand, within CA264_17970 at 4176.723 kb on - strand, within CA264_17970 at 4176.776 kb on - strand, within CA264_17970 at 4176.783 kb on - strand, within CA264_17970 at 4176.869 kb on - strand, within CA264_17970 at 4176.883 kb on + strand, within CA264_17970 at 4176.887 kb on + strand, within CA264_17970 at 4176.887 kb on + strand, within CA264_17970 at 4176.888 kb on - strand, within CA264_17970 at 4176.888 kb on - strand, within CA264_17970 at 4176.908 kb on + strand, within CA264_17970 at 4176.908 kb on + strand, within CA264_17970 at 4176.909 kb on - strand, within CA264_17970 at 4176.933 kb on + strand, within CA264_17970 at 4176.933 kb on + strand, within CA264_17970 at 4176.933 kb on + strand, within CA264_17970 at 4177.096 kb on + strand, within CA264_17970 at 4177.096 kb on + strand, within CA264_17970 at 4177.097 kb on - strand, within CA264_17970 at 4177.097 kb on - strand, within CA264_17970 at 4177.097 kb on - strand, within CA264_17970
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,174,793 + +4.2 4,174,793 + +4.6 4,174,793 + +4.0 4,174,794 - +1.8 4,174,879 + +2.2 4,174,880 - +1.5 4,174,880 - +1.1 4,174,882 - +0.6 4,174,882 - +0.7 4,174,882 - +2.1 4,174,882 - +0.8 4,174,886 + +3.0 4,174,889 + +3.7 4,174,919 + +1.8 4,174,930 + +1.6 4,174,930 + +1.4 4,174,940 + +1.2 4,175,060 - -1.6 4,175,071 + -1.3 4,175,071 + -1.7 4,175,071 + -1.9 4,175,071 + -1.0 4,175,072 - -2.7 4,175,098 + -2.5 4,175,099 - -1.5 4,175,143 + -3.5 4,175,144 - +2.0 4,175,215 - CA264_17965 0.15 +0.4 4,175,326 + CA264_17965 0.25 -0.6 4,175,326 + CA264_17965 0.25 -2.6 4,175,327 - CA264_17965 0.26 -1.6 4,175,347 + CA264_17965 0.27 +1.4 4,175,348 - CA264_17965 0.27 -2.4 4,175,382 + CA264_17965 0.31 -2.1 4,175,395 + CA264_17965 0.32 -2.8 4,175,396 - CA264_17965 0.32 -1.4 4,175,396 - CA264_17965 0.32 -2.8 4,175,399 - CA264_17965 0.32 +0.8 4,175,482 + CA264_17965 0.40 -3.4 4,175,497 + CA264_17965 0.41 -0.3 4,175,530 - CA264_17965 0.44 -1.7 4,175,540 - CA264_17965 0.45 -1.0 4,175,542 + CA264_17965 0.45 -2.0 4,175,543 - CA264_17965 0.45 -2.8 4,175,543 - CA264_17965 0.45 -1.7 4,175,554 + CA264_17965 0.46 -1.4 4,175,555 - CA264_17965 0.46 -1.9 4,175,575 + CA264_17965 0.48 -2.9 4,175,602 + CA264_17965 0.50 -1.5 4,175,647 + CA264_17965 0.54 -0.3 4,175,791 - CA264_17965 0.67 -2.3 4,175,795 + CA264_17965 0.68 +0.0 4,175,854 - CA264_17965 0.73 -0.3 4,175,976 + CA264_17965 0.84 -0.9 4,176,038 - CA264_17965 0.90 -1.2 4,176,148 + -1.2 4,176,168 - -2.8 4,176,262 + -2.3 4,176,394 - CA264_17970 0.14 -0.4 4,176,448 - CA264_17970 0.18 -2.5 4,176,594 + CA264_17970 0.27 -0.8 4,176,635 + CA264_17970 0.30 -2.2 4,176,635 + CA264_17970 0.30 -1.3 4,176,636 - CA264_17970 0.30 -3.4 4,176,638 + CA264_17970 0.30 +1.6 4,176,639 - CA264_17970 0.30 -2.1 4,176,639 - CA264_17970 0.30 +1.0 4,176,639 - CA264_17970 0.30 -3.5 4,176,643 + CA264_17970 0.30 -2.2 4,176,644 - CA264_17970 0.30 -1.9 4,176,656 + +2.4 4,176,714 + CA264_17970 0.35 -0.7 4,176,715 - CA264_17970 0.35 -2.4 4,176,715 - CA264_17970 0.35 -3.0 4,176,723 - CA264_17970 0.36 -0.8 4,176,776 - CA264_17970 0.39 -0.7 4,176,783 - CA264_17970 0.40 -2.0 4,176,869 - CA264_17970 0.45 +0.1 4,176,883 + CA264_17970 0.46 -2.2 4,176,887 + CA264_17970 0.46 -4.1 4,176,887 + CA264_17970 0.46 -2.5 4,176,888 - CA264_17970 0.46 -3.3 4,176,888 - CA264_17970 0.46 -2.3 4,176,908 + CA264_17970 0.48 -0.6 4,176,908 + CA264_17970 0.48 -1.5 4,176,909 - CA264_17970 0.48 -1.8 4,176,933 + CA264_17970 0.49 -2.3 4,176,933 + CA264_17970 0.49 -2.6 4,176,933 + CA264_17970 0.49 -0.6 4,177,096 + CA264_17970 0.60 -1.1 4,177,096 + CA264_17970 0.60 -3.1 4,177,097 - CA264_17970 0.60 -1.8 4,177,097 - CA264_17970 0.60 -1.7 4,177,097 - CA264_17970 0.60 -2.4
Or see this region's nucleotide sequence