Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17520 and CA264_17525 are separated by 126 nucleotides CA264_17525 and CA264_17530 are separated by 193 nucleotides CA264_17530 and CA264_17535 are separated by 75 nucleotides
CA264_17520: CA264_17520 - hypothetical protein, at 4,080,626 to 4,081,921
_17520
CA264_17525: CA264_17525 - LPS export ABC transporter periplasmic protein LptC, at 4,082,048 to 4,082,596
_17525
CA264_17530: CA264_17530 - hemolysin, at 4,082,790 to 4,084,091
_17530
CA264_17535: CA264_17535 - peptidylprolyl isomerase, at 4,084,167 to 4,086,272
_17535
Position (kb)
4082
4083
4084
4085 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4081.920 kb on - strand at 4081.928 kb on + strand at 4081.928 kb on + strand at 4081.928 kb on + strand at 4081.928 kb on + strand at 4081.935 kb on - strand at 4081.974 kb on + strand at 4081.975 kb on - strand at 4081.975 kb on - strand at 4081.975 kb on - strand at 4081.975 kb on - strand at 4082.022 kb on + strand at 4082.023 kb on - strand at 4082.673 kb on - strand at 4082.673 kb on - strand at 4082.706 kb on + strand at 4082.725 kb on + strand at 4082.725 kb on + strand at 4082.726 kb on - strand at 4082.726 kb on - strand at 4082.727 kb on + strand at 4082.728 kb on - strand at 4082.794 kb on + strand at 4082.795 kb on - strand at 4082.813 kb on - strand at 4083.055 kb on - strand, within CA264_17530 at 4083.216 kb on + strand, within CA264_17530 at 4083.217 kb on - strand, within CA264_17530 at 4083.220 kb on - strand, within CA264_17530 at 4083.240 kb on + strand, within CA264_17530 at 4083.358 kb on - strand, within CA264_17530 at 4083.515 kb on + strand, within CA264_17530 at 4083.517 kb on + strand, within CA264_17530 at 4083.563 kb on + strand, within CA264_17530 at 4083.616 kb on + strand, within CA264_17530 at 4083.639 kb on - strand, within CA264_17530 at 4083.641 kb on + strand, within CA264_17530 at 4083.642 kb on - strand, within CA264_17530 at 4083.746 kb on - strand, within CA264_17530 at 4083.746 kb on - strand, within CA264_17530 at 4083.746 kb on - strand, within CA264_17530 at 4083.749 kb on + strand, within CA264_17530 at 4083.749 kb on + strand, within CA264_17530 at 4083.750 kb on - strand, within CA264_17530 at 4083.750 kb on - strand, within CA264_17530 at 4083.766 kb on + strand, within CA264_17530 at 4083.767 kb on - strand, within CA264_17530 at 4083.767 kb on - strand, within CA264_17530 at 4083.788 kb on - strand, within CA264_17530 at 4083.798 kb on + strand, within CA264_17530 at 4083.799 kb on - strand, within CA264_17530 at 4083.805 kb on + strand, within CA264_17530 at 4083.830 kb on + strand, within CA264_17530 at 4083.849 kb on + strand, within CA264_17530 at 4083.874 kb on + strand, within CA264_17530 at 4083.875 kb on - strand, within CA264_17530 at 4083.922 kb on - strand, within CA264_17530 at 4083.980 kb on + strand at 4083.985 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,081,920 - -1.1 4,081,928 + -0.5 4,081,928 + -1.8 4,081,928 + -1.3 4,081,928 + -0.7 4,081,935 - +0.7 4,081,974 + -0.2 4,081,975 - +0.1 4,081,975 - -0.2 4,081,975 - -0.7 4,081,975 - -0.0 4,082,022 + +0.2 4,082,023 - -0.4 4,082,673 - +0.6 4,082,673 - +1.1 4,082,706 + -0.5 4,082,725 + -0.2 4,082,725 + -0.3 4,082,726 - -0.3 4,082,726 - +0.4 4,082,727 + +0.5 4,082,728 - -1.2 4,082,794 + +1.3 4,082,795 - -0.7 4,082,813 - +0.2 4,083,055 - CA264_17530 0.20 +1.1 4,083,216 + CA264_17530 0.33 +1.1 4,083,217 - CA264_17530 0.33 +1.2 4,083,220 - CA264_17530 0.33 +2.2 4,083,240 + CA264_17530 0.35 +0.4 4,083,358 - CA264_17530 0.44 +1.6 4,083,515 + CA264_17530 0.56 +1.0 4,083,517 + CA264_17530 0.56 +0.6 4,083,563 + CA264_17530 0.59 +4.0 4,083,616 + CA264_17530 0.63 +1.2 4,083,639 - CA264_17530 0.65 +1.7 4,083,641 + CA264_17530 0.65 +0.7 4,083,642 - CA264_17530 0.65 +1.0 4,083,746 - CA264_17530 0.73 -0.3 4,083,746 - CA264_17530 0.73 +0.9 4,083,746 - CA264_17530 0.73 +1.8 4,083,749 + CA264_17530 0.74 +0.9 4,083,749 + CA264_17530 0.74 +2.4 4,083,750 - CA264_17530 0.74 +0.8 4,083,750 - CA264_17530 0.74 +0.9 4,083,766 + CA264_17530 0.75 +1.0 4,083,767 - CA264_17530 0.75 +1.8 4,083,767 - CA264_17530 0.75 +1.5 4,083,788 - CA264_17530 0.77 +0.4 4,083,798 + CA264_17530 0.77 +1.0 4,083,799 - CA264_17530 0.77 +2.1 4,083,805 + CA264_17530 0.78 +1.4 4,083,830 + CA264_17530 0.80 +1.7 4,083,849 + CA264_17530 0.81 +1.4 4,083,874 + CA264_17530 0.83 +1.5 4,083,875 - CA264_17530 0.83 +1.7 4,083,922 - CA264_17530 0.87 +1.4 4,083,980 + +0.6 4,083,985 + +1.2
Or see this region's nucleotide sequence