Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17360 and CA264_17365 are separated by 90 nucleotides CA264_17365 and CA264_17370 are separated by 104 nucleotides CA264_17370 and CA264_17375 are separated by 321 nucleotides CA264_17375 and CA264_17380 are separated by 159 nucleotides
CA264_17360: CA264_17360 - geranyl transferase, at 4,047,775 to 4,048,749
_17360
CA264_17365: CA264_17365 - rhomboid family intramembrane serine protease, at 4,048,840 to 4,049,463
_17365
CA264_17370: CA264_17370 - hypothetical protein, at 4,049,568 to 4,050,053
_17370
CA264_17375: CA264_17375 - hypothetical protein, at 4,050,375 to 4,050,662
_17375
CA264_17380: CA264_17380 - SLC13 family permease, at 4,050,822 to 4,052,600
_17380
Position (kb)
4049
4050
4051 Strain fitness (log2 ratio)
-1
0
1
2 at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.817 kb on - strand at 4049.026 kb on - strand, within CA264_17365 at 4049.033 kb on - strand, within CA264_17365 at 4049.093 kb on + strand, within CA264_17365 at 4049.093 kb on + strand, within CA264_17365 at 4049.102 kb on - strand, within CA264_17365 at 4049.127 kb on + strand, within CA264_17365 at 4049.149 kb on + strand, within CA264_17365 at 4049.150 kb on - strand, within CA264_17365 at 4049.150 kb on - strand, within CA264_17365 at 4049.177 kb on - strand, within CA264_17365 at 4049.302 kb on + strand, within CA264_17365 at 4049.311 kb on + strand, within CA264_17365 at 4049.311 kb on + strand, within CA264_17365 at 4049.311 kb on + strand, within CA264_17365 at 4049.312 kb on - strand, within CA264_17365 at 4049.461 kb on + strand at 4049.536 kb on + strand at 4049.542 kb on + strand at 4049.542 kb on + strand at 4049.542 kb on + strand at 4049.552 kb on + strand at 4049.564 kb on + strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.588 kb on + strand at 4049.589 kb on - strand at 4049.589 kb on - strand at 4049.592 kb on + strand at 4049.597 kb on - strand at 4049.697 kb on + strand, within CA264_17370 at 4049.819 kb on - strand, within CA264_17370 at 4049.819 kb on - strand, within CA264_17370 at 4049.924 kb on + strand, within CA264_17370 at 4049.963 kb on + strand, within CA264_17370 at 4049.963 kb on + strand, within CA264_17370 at 4049.963 kb on + strand, within CA264_17370 at 4049.964 kb on - strand, within CA264_17370 at 4050.047 kb on + strand at 4050.047 kb on + strand at 4050.048 kb on - strand at 4050.048 kb on - strand at 4050.048 kb on - strand at 4050.050 kb on - strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.052 kb on - strand at 4050.052 kb on - strand at 4050.055 kb on + strand at 4050.055 kb on + strand at 4050.066 kb on + strand at 4050.217 kb on + strand at 4050.217 kb on + strand at 4050.217 kb on + strand at 4050.221 kb on + strand at 4050.222 kb on - strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.254 kb on - strand at 4050.254 kb on - strand at 4050.254 kb on - strand at 4050.254 kb on - strand at 4050.256 kb on + strand at 4050.282 kb on + strand at 4050.426 kb on - strand, within CA264_17375 at 4050.461 kb on + strand, within CA264_17375 at 4050.462 kb on - strand, within CA264_17375 at 4050.511 kb on + strand, within CA264_17375 at 4050.544 kb on + strand, within CA264_17375 at 4050.544 kb on + strand, within CA264_17375 at 4050.544 kb on + strand, within CA264_17375 at 4050.545 kb on - strand, within CA264_17375 at 4050.620 kb on + strand, within CA264_17375 at 4050.620 kb on + strand, within CA264_17375 at 4050.627 kb on + strand, within CA264_17375 at 4050.682 kb on - strand at 4050.710 kb on + strand at 4050.734 kb on + strand at 4050.735 kb on - strand at 4050.735 kb on - strand at 4050.736 kb on + strand at 4050.737 kb on - strand at 4050.743 kb on + strand at 4050.744 kb on - strand at 4050.744 kb on - strand at 4050.744 kb on - strand at 4050.853 kb on + strand at 4051.019 kb on + strand, within CA264_17380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,048,774 - +0.9 4,048,774 - +0.6 4,048,774 - +1.0 4,048,774 - +0.7 4,048,774 - +1.4 4,048,817 - -0.8 4,049,026 - CA264_17365 0.30 +0.5 4,049,033 - CA264_17365 0.31 +0.1 4,049,093 + CA264_17365 0.41 +1.8 4,049,093 + CA264_17365 0.41 +0.4 4,049,102 - CA264_17365 0.42 +0.0 4,049,127 + CA264_17365 0.46 -0.9 4,049,149 + CA264_17365 0.50 -0.9 4,049,150 - CA264_17365 0.50 -0.2 4,049,150 - CA264_17365 0.50 +0.7 4,049,177 - CA264_17365 0.54 +0.4 4,049,302 + CA264_17365 0.74 -0.2 4,049,311 + CA264_17365 0.75 +0.5 4,049,311 + CA264_17365 0.75 -0.6 4,049,311 + CA264_17365 0.75 +0.4 4,049,312 - CA264_17365 0.76 -0.0 4,049,461 + -0.9 4,049,536 + -1.0 4,049,542 + -0.7 4,049,542 + +0.7 4,049,542 + +0.9 4,049,552 + -0.7 4,049,564 + +2.0 4,049,565 - +0.3 4,049,565 - -0.8 4,049,565 - +0.5 4,049,565 - +0.1 4,049,565 - -0.1 4,049,588 + +0.6 4,049,589 - +0.6 4,049,589 - -0.6 4,049,592 + -0.1 4,049,597 - -0.3 4,049,697 + CA264_17370 0.27 +0.5 4,049,819 - CA264_17370 0.52 +0.3 4,049,819 - CA264_17370 0.52 +0.4 4,049,924 + CA264_17370 0.73 +0.6 4,049,963 + CA264_17370 0.81 +0.2 4,049,963 + CA264_17370 0.81 +0.3 4,049,963 + CA264_17370 0.81 -0.3 4,049,964 - CA264_17370 0.81 -0.9 4,050,047 + +0.4 4,050,047 + -0.6 4,050,048 - +0.4 4,050,048 - -0.6 4,050,048 - +0.1 4,050,050 - -1.7 4,050,051 + +0.2 4,050,051 + -0.4 4,050,051 + +0.7 4,050,051 + +0.6 4,050,051 + -0.6 4,050,052 - +0.2 4,050,052 - +0.9 4,050,055 + -0.2 4,050,055 + -0.4 4,050,066 + -1.3 4,050,217 + +1.2 4,050,217 + +0.3 4,050,217 + +1.1 4,050,221 + +0.6 4,050,222 - +0.1 4,050,253 + -0.1 4,050,253 + -0.6 4,050,253 + +0.2 4,050,253 + -0.2 4,050,253 + +0.3 4,050,253 + -0.1 4,050,254 - +0.2 4,050,254 - -0.0 4,050,254 - -0.0 4,050,254 - +2.0 4,050,256 + -0.1 4,050,282 + +0.0 4,050,426 - CA264_17375 0.18 +1.3 4,050,461 + CA264_17375 0.30 +0.1 4,050,462 - CA264_17375 0.30 +0.4 4,050,511 + CA264_17375 0.47 +0.0 4,050,544 + CA264_17375 0.59 -1.2 4,050,544 + CA264_17375 0.59 -0.7 4,050,544 + CA264_17375 0.59 -0.1 4,050,545 - CA264_17375 0.59 +0.8 4,050,620 + CA264_17375 0.85 +0.7 4,050,620 + CA264_17375 0.85 -0.3 4,050,627 + CA264_17375 0.88 -0.5 4,050,682 - +0.1 4,050,710 + -0.9 4,050,734 + +0.0 4,050,735 - -0.7 4,050,735 - +0.1 4,050,736 + -0.0 4,050,737 - -0.7 4,050,743 + +0.5 4,050,744 - -0.6 4,050,744 - -0.6 4,050,744 - +0.2 4,050,853 + +0.0 4,051,019 + CA264_17380 0.11 -0.9
Or see this region's nucleotide sequence