Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16885 and CA264_16890 are separated by 3 nucleotides CA264_16890 and CA264_16895 are separated by 169 nucleotides CA264_16895 and CA264_16900 are separated by 171 nucleotides CA264_16900 and CA264_16905 are separated by 2 nucleotides
CA264_16885: CA264_16885 - alpha/beta hydrolase, at 3,935,831 to 3,936,547
_16885
CA264_16890: CA264_16890 - septal ring lytic transglycosylase RlpA family lipoprotein, at 3,936,551 to 3,936,988
_16890
CA264_16895: CA264_16895 - hypothetical protein, at 3,937,158 to 3,937,484
_16895
CA264_16900: CA264_16900 - hypothetical protein, at 3,937,656 to 3,938,309
_16900
CA264_16905: CA264_16905 - hypothetical protein, at 3,938,312 to 3,938,641
_16905
Position (kb)
3937
3938 Strain fitness (log2 ratio)
-1
0
1
2 at 3936.262 kb on - strand, within CA264_16885 at 3936.262 kb on - strand, within CA264_16885 at 3936.432 kb on + strand, within CA264_16885 at 3936.432 kb on + strand, within CA264_16885 at 3936.433 kb on - strand, within CA264_16885 at 3936.433 kb on - strand, within CA264_16885 at 3936.438 kb on + strand, within CA264_16885 at 3936.532 kb on + strand at 3936.533 kb on - strand at 3936.533 kb on - strand at 3936.540 kb on + strand at 3936.550 kb on + strand at 3936.551 kb on - strand at 3936.601 kb on - strand, within CA264_16890 at 3936.624 kb on + strand, within CA264_16890 at 3936.625 kb on - strand, within CA264_16890 at 3936.625 kb on - strand, within CA264_16890 at 3936.710 kb on + strand, within CA264_16890 at 3936.810 kb on + strand, within CA264_16890 at 3937.013 kb on - strand at 3937.080 kb on + strand at 3937.089 kb on + strand at 3937.102 kb on + strand at 3937.477 kb on + strand at 3937.489 kb on - strand at 3937.489 kb on - strand at 3937.489 kb on - strand at 3937.634 kb on - strand at 3937.814 kb on - strand, within CA264_16900 at 3937.814 kb on - strand at 3937.869 kb on + strand, within CA264_16900 at 3937.870 kb on - strand, within CA264_16900 at 3937.927 kb on + strand, within CA264_16900 at 3937.928 kb on - strand, within CA264_16900 at 3937.928 kb on - strand, within CA264_16900 at 3937.928 kb on - strand, within CA264_16900 at 3938.040 kb on + strand, within CA264_16900 at 3938.080 kb on + strand, within CA264_16900 at 3938.128 kb on + strand, within CA264_16900 at 3938.228 kb on + strand, within CA264_16900 at 3938.228 kb on + strand, within CA264_16900 at 3938.229 kb on - strand, within CA264_16900 at 3938.238 kb on - strand, within CA264_16900 at 3938.298 kb on + strand at 3938.309 kb on + strand at 3938.309 kb on + strand at 3938.310 kb on - strand at 3938.314 kb on - strand at 3938.314 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,936,262 - CA264_16885 0.60 +0.8 3,936,262 - CA264_16885 0.60 +0.1 3,936,432 + CA264_16885 0.84 -0.5 3,936,432 + CA264_16885 0.84 -0.8 3,936,433 - CA264_16885 0.84 -0.5 3,936,433 - CA264_16885 0.84 -0.3 3,936,438 + CA264_16885 0.85 +0.7 3,936,532 + +0.0 3,936,533 - -0.2 3,936,533 - +0.3 3,936,540 + +0.3 3,936,550 + +0.0 3,936,551 - +0.4 3,936,601 - CA264_16890 0.11 -0.4 3,936,624 + CA264_16890 0.17 +2.2 3,936,625 - CA264_16890 0.17 +1.1 3,936,625 - CA264_16890 0.17 -1.0 3,936,710 + CA264_16890 0.36 +0.1 3,936,810 + CA264_16890 0.59 -0.9 3,937,013 - -1.1 3,937,080 + +0.5 3,937,089 + +0.4 3,937,102 + +1.5 3,937,477 + +2.0 3,937,489 - +0.7 3,937,489 - +0.4 3,937,489 - +0.7 3,937,634 - +1.4 3,937,814 - CA264_16900 0.24 +0.5 3,937,814 - +0.4 3,937,869 + CA264_16900 0.33 -0.7 3,937,870 - CA264_16900 0.33 +0.5 3,937,927 + CA264_16900 0.41 -0.5 3,937,928 - CA264_16900 0.42 -0.6 3,937,928 - CA264_16900 0.42 +0.6 3,937,928 - CA264_16900 0.42 +1.3 3,938,040 + CA264_16900 0.59 +1.0 3,938,080 + CA264_16900 0.65 +1.0 3,938,128 + CA264_16900 0.72 +0.8 3,938,228 + CA264_16900 0.87 +0.1 3,938,228 + CA264_16900 0.87 +0.1 3,938,229 - CA264_16900 0.88 +1.1 3,938,238 - CA264_16900 0.89 +0.4 3,938,298 + -0.3 3,938,309 + +1.1 3,938,309 + -0.8 3,938,310 - +2.2 3,938,314 - -0.8 3,938,314 - +0.0
Or see this region's nucleotide sequence