Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15875 and CA264_15880 overlap by 1 nucleotides CA264_15880 and CA264_15885 are separated by 417 nucleotides CA264_15885 and CA264_15890 are separated by 211 nucleotides CA264_15890 and CA264_15895 are separated by 204 nucleotides
CA264_15875: CA264_15875 - bacillithiol biosynthesis cysteine-adding enzyme BshC, at 3,705,559 to 3,707,136
_15875
CA264_15880: CA264_15880 - 5-formyltetrahydrofolate cyclo-ligase, at 3,707,136 to 3,707,714
_15880
CA264_15885: CA264_15885 - TetR family transcriptional regulator, at 3,708,132 to 3,708,665
_15885
CA264_15890: CA264_15890 - hypothetical protein, at 3,708,877 to 3,709,173
_15890
CA264_15895: CA264_15895 - hypothetical protein, at 3,709,378 to 3,710,541
_15895
Position (kb)
3708
3709 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3707.305 kb on + strand, within CA264_15880 at 3707.411 kb on - strand, within CA264_15880 at 3707.476 kb on + strand, within CA264_15880 at 3707.636 kb on + strand, within CA264_15880 at 3707.849 kb on + strand at 3707.850 kb on - strand at 3707.883 kb on + strand at 3707.913 kb on - strand at 3707.968 kb on + strand at 3708.010 kb on - strand at 3708.019 kb on - strand at 3708.034 kb on - strand at 3708.115 kb on - strand at 3708.120 kb on - strand at 3708.137 kb on + strand at 3708.251 kb on + strand, within CA264_15885 at 3708.253 kb on + strand, within CA264_15885 at 3708.254 kb on - strand, within CA264_15885 at 3708.254 kb on - strand, within CA264_15885 at 3708.254 kb on - strand, within CA264_15885 at 3708.264 kb on + strand, within CA264_15885 at 3708.264 kb on + strand, within CA264_15885 at 3708.265 kb on - strand, within CA264_15885 at 3708.265 kb on - strand, within CA264_15885 at 3708.265 kb on - strand, within CA264_15885 at 3708.269 kb on + strand, within CA264_15885 at 3708.269 kb on + strand, within CA264_15885 at 3708.654 kb on + strand at 3708.655 kb on - strand at 3708.664 kb on - strand at 3708.719 kb on + strand at 3708.720 kb on - strand at 3708.745 kb on + strand at 3708.767 kb on - strand at 3708.796 kb on + strand at 3708.799 kb on - strand at 3708.833 kb on + strand at 3708.834 kb on - strand at 3708.842 kb on + strand at 3708.867 kb on - strand at 3708.872 kb on + strand at 3708.873 kb on - strand at 3708.874 kb on + strand at 3708.874 kb on + strand at 3708.875 kb on - strand at 3708.968 kb on - strand, within CA264_15890 at 3708.968 kb on - strand, within CA264_15890 at 3708.968 kb on - strand, within CA264_15890 at 3708.968 kb on - strand, within CA264_15890 at 3709.005 kb on + strand, within CA264_15890 at 3709.006 kb on - strand, within CA264_15890 at 3709.020 kb on - strand, within CA264_15890 at 3709.106 kb on + strand, within CA264_15890 at 3709.106 kb on + strand, within CA264_15890 at 3709.127 kb on + strand, within CA264_15890 at 3709.128 kb on - strand, within CA264_15890 at 3709.132 kb on - strand, within CA264_15890 at 3709.179 kb on - strand at 3709.533 kb on + strand, within CA264_15895 at 3709.534 kb on - strand, within CA264_15895 at 3709.653 kb on + strand, within CA264_15895
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,707,305 + CA264_15880 0.29 -0.1 3,707,411 - CA264_15880 0.47 +2.2 3,707,476 + CA264_15880 0.59 -0.4 3,707,636 + CA264_15880 0.86 +1.3 3,707,849 + -0.0 3,707,850 - +0.9 3,707,883 + +0.1 3,707,913 - +0.6 3,707,968 + -0.2 3,708,010 - +0.3 3,708,019 - +1.6 3,708,034 - -0.9 3,708,115 - +0.3 3,708,120 - -0.6 3,708,137 + +0.4 3,708,251 + CA264_15885 0.22 -0.8 3,708,253 + CA264_15885 0.23 -0.2 3,708,254 - CA264_15885 0.23 +0.4 3,708,254 - CA264_15885 0.23 +0.6 3,708,254 - CA264_15885 0.23 -0.4 3,708,264 + CA264_15885 0.25 -0.7 3,708,264 + CA264_15885 0.25 -0.6 3,708,265 - CA264_15885 0.25 -0.8 3,708,265 - CA264_15885 0.25 -0.4 3,708,265 - CA264_15885 0.25 -0.0 3,708,269 + CA264_15885 0.26 +1.3 3,708,269 + CA264_15885 0.26 +1.3 3,708,654 + -0.6 3,708,655 - -0.2 3,708,664 - +0.6 3,708,719 + -0.1 3,708,720 - +0.7 3,708,745 + -3.0 3,708,767 - -1.9 3,708,796 + -0.6 3,708,799 - -0.1 3,708,833 + -0.8 3,708,834 - -0.3 3,708,842 + -0.5 3,708,867 - -0.3 3,708,872 + +0.2 3,708,873 - -1.2 3,708,874 + -0.4 3,708,874 + +1.2 3,708,875 - -0.3 3,708,968 - CA264_15890 0.31 +0.9 3,708,968 - CA264_15890 0.31 -0.5 3,708,968 - CA264_15890 0.31 -0.3 3,708,968 - CA264_15890 0.31 -1.2 3,709,005 + CA264_15890 0.43 -0.1 3,709,006 - CA264_15890 0.43 -0.7 3,709,020 - CA264_15890 0.48 -0.6 3,709,106 + CA264_15890 0.77 +0.0 3,709,106 + CA264_15890 0.77 -0.0 3,709,127 + CA264_15890 0.84 -0.1 3,709,128 - CA264_15890 0.85 -0.6 3,709,132 - CA264_15890 0.86 -0.9 3,709,179 - -0.5 3,709,533 + CA264_15895 0.13 +0.6 3,709,534 - CA264_15895 0.13 -1.2 3,709,653 + CA264_15895 0.24 -0.2
Or see this region's nucleotide sequence