Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15840 and CA264_15845 are separated by 198 nucleotides CA264_15845 and CA264_15850 are separated by 186 nucleotides CA264_15850 and CA264_15855 are separated by 66 nucleotides
CA264_15840: CA264_15840 - hypothetical protein, at 3,698,090 to 3,698,932
_15840
CA264_15845: CA264_15845 - hypothetical protein, at 3,699,131 to 3,699,583
_15845
CA264_15850: CA264_15850 - IclR family transcriptional regulator, at 3,699,770 to 3,700,348
_15850
CA264_15855: CA264_15855 - aminotransferase, at 3,700,415 to 3,701,563
_15855
Position (kb)
3699
3700
3701 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3698.894 kb on + strand at 3698.937 kb on + strand at 3698.939 kb on + strand at 3698.944 kb on - strand at 3698.968 kb on + strand at 3698.973 kb on + strand at 3698.974 kb on - strand at 3698.974 kb on - strand at 3699.020 kb on + strand at 3699.040 kb on - strand at 3699.044 kb on + strand at 3699.045 kb on - strand at 3699.079 kb on - strand at 3699.083 kb on + strand at 3699.115 kb on + strand at 3699.116 kb on - strand at 3699.266 kb on - strand, within CA264_15845 at 3699.267 kb on + strand, within CA264_15845 at 3699.408 kb on - strand, within CA264_15845 at 3699.462 kb on + strand, within CA264_15845 at 3699.572 kb on + strand at 3699.573 kb on - strand at 3699.751 kb on - strand at 3699.751 kb on - strand at 3699.992 kb on + strand, within CA264_15850 at 3700.137 kb on + strand, within CA264_15850 at 3700.141 kb on + strand, within CA264_15850 at 3700.152 kb on - strand, within CA264_15850 at 3700.206 kb on + strand, within CA264_15850 at 3700.223 kb on + strand, within CA264_15850 at 3700.223 kb on + strand, within CA264_15850 at 3700.224 kb on - strand, within CA264_15850 at 3700.224 kb on - strand, within CA264_15850 at 3700.311 kb on + strand at 3700.316 kb on + strand at 3700.316 kb on + strand at 3700.317 kb on - strand at 3700.317 kb on - strand at 3700.320 kb on + strand at 3700.342 kb on + strand at 3700.343 kb on - strand at 3700.356 kb on + strand at 3700.356 kb on + strand at 3700.356 kb on + strand at 3700.356 kb on + strand at 3700.356 kb on + strand at 3700.357 kb on - strand at 3700.357 kb on - strand at 3700.357 kb on - strand at 3700.357 kb on - strand at 3700.357 kb on - strand at 3700.358 kb on + strand at 3700.359 kb on - strand at 3700.359 kb on - strand at 3700.359 kb on - strand at 3700.359 kb on - strand at 3700.403 kb on + strand at 3700.404 kb on - strand at 3700.404 kb on - strand at 3700.406 kb on + strand at 3700.412 kb on + strand at 3700.412 kb on + strand at 3700.414 kb on + strand at 3700.414 kb on + strand at 3700.419 kb on + strand at 3700.419 kb on + strand at 3700.419 kb on + strand at 3700.551 kb on + strand, within CA264_15855 at 3700.655 kb on + strand, within CA264_15855 at 3700.686 kb on + strand, within CA264_15855 at 3700.729 kb on + strand, within CA264_15855 at 3700.730 kb on - strand, within CA264_15855 at 3700.787 kb on + strand, within CA264_15855 at 3700.787 kb on + strand, within CA264_15855 at 3700.787 kb on + strand, within CA264_15855 at 3700.787 kb on + strand, within CA264_15855 at 3700.823 kb on - strand, within CA264_15855 at 3700.826 kb on + strand, within CA264_15855 at 3700.826 kb on + strand, within CA264_15855 at 3700.826 kb on + strand, within CA264_15855 at 3700.826 kb on + strand, within CA264_15855 at 3700.827 kb on - strand, within CA264_15855 at 3700.827 kb on - strand, within CA264_15855 at 3700.827 kb on - strand, within CA264_15855 at 3700.873 kb on - strand, within CA264_15855 at 3701.018 kb on + strand, within CA264_15855 at 3701.018 kb on + strand, within CA264_15855 at 3701.019 kb on - strand, within CA264_15855 at 3701.019 kb on - strand, within CA264_15855 at 3701.051 kb on + strand, within CA264_15855 at 3701.200 kb on + strand, within CA264_15855 at 3701.234 kb on - strand, within CA264_15855 at 3701.265 kb on - strand, within CA264_15855 at 3701.341 kb on + strand, within CA264_15855 at 3701.342 kb on - strand, within CA264_15855 at 3701.344 kb on - strand, within CA264_15855
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,698,894 + +0.5 3,698,937 + +1.1 3,698,939 + +0.2 3,698,944 - +1.0 3,698,968 + -0.1 3,698,973 + -0.5 3,698,974 - -1.3 3,698,974 - -1.3 3,699,020 + +0.1 3,699,040 - +0.0 3,699,044 + -1.0 3,699,045 - +0.0 3,699,079 - -0.8 3,699,083 + -0.5 3,699,115 + -0.1 3,699,116 - +0.0 3,699,266 - CA264_15845 0.30 -0.2 3,699,267 + CA264_15845 0.30 -1.1 3,699,408 - CA264_15845 0.61 -1.1 3,699,462 + CA264_15845 0.73 +1.3 3,699,572 + +0.7 3,699,573 - -0.4 3,699,751 - -1.7 3,699,751 - +1.3 3,699,992 + CA264_15850 0.38 +0.6 3,700,137 + CA264_15850 0.63 -2.5 3,700,141 + CA264_15850 0.64 -3.8 3,700,152 - CA264_15850 0.66 -1.1 3,700,206 + CA264_15850 0.75 -2.2 3,700,223 + CA264_15850 0.78 -1.1 3,700,223 + CA264_15850 0.78 -1.0 3,700,224 - CA264_15850 0.78 +0.6 3,700,224 - CA264_15850 0.78 -0.7 3,700,311 + -0.2 3,700,316 + +1.6 3,700,316 + -1.3 3,700,317 - +0.3 3,700,317 - +0.2 3,700,320 + +0.1 3,700,342 + -0.6 3,700,343 - -1.3 3,700,356 + -0.5 3,700,356 + +0.4 3,700,356 + +0.3 3,700,356 + -0.0 3,700,356 + -2.5 3,700,357 - -1.1 3,700,357 - -0.3 3,700,357 - -0.8 3,700,357 - -1.0 3,700,357 - -0.5 3,700,358 + -0.8 3,700,359 - -0.5 3,700,359 - -1.1 3,700,359 - +1.3 3,700,359 - +0.3 3,700,403 + -0.4 3,700,404 - -0.7 3,700,404 - +1.0 3,700,406 + +0.6 3,700,412 + +0.1 3,700,412 + -0.6 3,700,414 + -0.2 3,700,414 + +0.8 3,700,419 + +0.7 3,700,419 + -0.1 3,700,419 + +0.1 3,700,551 + CA264_15855 0.12 +0.5 3,700,655 + CA264_15855 0.21 +0.8 3,700,686 + CA264_15855 0.24 -0.3 3,700,729 + CA264_15855 0.27 -0.4 3,700,730 - CA264_15855 0.27 +0.4 3,700,787 + CA264_15855 0.32 +2.6 3,700,787 + CA264_15855 0.32 -0.9 3,700,787 + CA264_15855 0.32 -0.4 3,700,787 + CA264_15855 0.32 -0.9 3,700,823 - CA264_15855 0.36 +0.4 3,700,826 + CA264_15855 0.36 -0.5 3,700,826 + CA264_15855 0.36 -0.2 3,700,826 + CA264_15855 0.36 -0.3 3,700,826 + CA264_15855 0.36 -0.8 3,700,827 - CA264_15855 0.36 -0.6 3,700,827 - CA264_15855 0.36 -1.9 3,700,827 - CA264_15855 0.36 +0.6 3,700,873 - CA264_15855 0.40 +0.5 3,701,018 + CA264_15855 0.52 +0.5 3,701,018 + CA264_15855 0.52 -0.1 3,701,019 - CA264_15855 0.53 -0.4 3,701,019 - CA264_15855 0.53 -0.3 3,701,051 + CA264_15855 0.55 +2.2 3,701,200 + CA264_15855 0.68 +0.3 3,701,234 - CA264_15855 0.71 +0.9 3,701,265 - CA264_15855 0.74 -0.7 3,701,341 + CA264_15855 0.81 -0.8 3,701,342 - CA264_15855 0.81 -0.2 3,701,344 - CA264_15855 0.81 -0.3
Or see this region's nucleotide sequence