Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15505 and CA264_15510 are separated by 137 nucleotides CA264_15510 and CA264_15515 are separated by 95 nucleotides
CA264_15505: CA264_15505 - phosphatase PAP2 family protein, at 3,631,156 to 3,631,947
_15505
CA264_15510: CA264_15510 - DUF4864 domain-containing protein, at 3,632,085 to 3,632,645
_15510
CA264_15515: CA264_15515 - peptidase, at 3,632,741 to 3,633,757
_15515
Position (kb)
3632
3633 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3631.154 kb on + strand at 3631.247 kb on - strand, within CA264_15505 at 3631.385 kb on + strand, within CA264_15505 at 3631.385 kb on + strand, within CA264_15505 at 3631.455 kb on + strand, within CA264_15505 at 3631.455 kb on + strand, within CA264_15505 at 3631.456 kb on - strand, within CA264_15505 at 3631.456 kb on - strand, within CA264_15505 at 3631.460 kb on + strand, within CA264_15505 at 3631.460 kb on + strand, within CA264_15505 at 3631.460 kb on + strand, within CA264_15505 at 3631.460 kb on + strand, within CA264_15505 at 3631.460 kb on + strand, within CA264_15505 at 3631.460 kb on + strand, within CA264_15505 at 3631.461 kb on - strand, within CA264_15505 at 3631.461 kb on - strand, within CA264_15505 at 3631.574 kb on - strand, within CA264_15505 at 3631.590 kb on + strand, within CA264_15505 at 3631.661 kb on - strand, within CA264_15505 at 3631.680 kb on + strand, within CA264_15505 at 3631.680 kb on + strand, within CA264_15505 at 3631.681 kb on - strand, within CA264_15505 at 3631.683 kb on - strand, within CA264_15505 at 3631.683 kb on - strand, within CA264_15505 at 3631.683 kb on - strand, within CA264_15505 at 3631.689 kb on + strand, within CA264_15505 at 3631.690 kb on - strand, within CA264_15505 at 3631.690 kb on - strand, within CA264_15505 at 3631.853 kb on - strand, within CA264_15505 at 3631.926 kb on + strand at 3631.967 kb on - strand at 3631.967 kb on - strand at 3631.968 kb on + strand at 3631.969 kb on - strand at 3632.069 kb on + strand at 3632.070 kb on - strand at 3632.078 kb on + strand at 3632.082 kb on + strand at 3632.116 kb on + strand at 3632.116 kb on + strand at 3632.116 kb on + strand at 3632.116 kb on + strand at 3632.135 kb on + strand at 3632.228 kb on - strand, within CA264_15510 at 3632.232 kb on + strand, within CA264_15510 at 3632.232 kb on + strand, within CA264_15510 at 3632.232 kb on + strand, within CA264_15510 at 3632.235 kb on - strand, within CA264_15510 at 3632.251 kb on - strand, within CA264_15510 at 3632.297 kb on - strand, within CA264_15510 at 3632.431 kb on - strand, within CA264_15510 at 3632.512 kb on + strand, within CA264_15510 at 3632.550 kb on - strand, within CA264_15510 at 3632.551 kb on + strand, within CA264_15510 at 3632.551 kb on + strand, within CA264_15510 at 3632.555 kb on + strand, within CA264_15510 at 3632.555 kb on + strand, within CA264_15510 at 3632.555 kb on + strand, within CA264_15510 at 3632.556 kb on - strand, within CA264_15510 at 3632.577 kb on + strand, within CA264_15510 at 3632.577 kb on + strand, within CA264_15510 at 3632.577 kb on + strand, within CA264_15510 at 3632.644 kb on - strand at 3632.644 kb on - strand at 3632.669 kb on + strand at 3632.712 kb on + strand at 3632.712 kb on + strand at 3632.712 kb on + strand at 3632.712 kb on + strand at 3632.713 kb on - strand at 3632.713 kb on - strand at 3632.721 kb on - strand at 3632.730 kb on - strand at 3632.731 kb on + strand at 3632.732 kb on - strand at 3632.732 kb on - strand at 3632.732 kb on - strand at 3632.732 kb on - strand at 3632.732 kb on - strand at 3632.802 kb on - strand at 3632.814 kb on + strand at 3632.902 kb on + strand, within CA264_15515 at 3632.903 kb on - strand, within CA264_15515 at 3632.903 kb on - strand, within CA264_15515 at 3632.906 kb on + strand, within CA264_15515 at 3632.922 kb on + strand, within CA264_15515 at 3633.058 kb on - strand, within CA264_15515 at 3633.161 kb on + strand, within CA264_15515 at 3633.279 kb on + strand, within CA264_15515 at 3633.360 kb on + strand, within CA264_15515 at 3633.361 kb on - strand, within CA264_15515
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,631,154 + +0.1 3,631,247 - CA264_15505 0.11 -0.6 3,631,385 + CA264_15505 0.29 -0.7 3,631,385 + CA264_15505 0.29 +0.5 3,631,455 + CA264_15505 0.38 -0.1 3,631,455 + CA264_15505 0.38 -0.1 3,631,456 - CA264_15505 0.38 -0.5 3,631,456 - CA264_15505 0.38 -0.1 3,631,460 + CA264_15505 0.38 -0.7 3,631,460 + CA264_15505 0.38 +1.2 3,631,460 + CA264_15505 0.38 -1.7 3,631,460 + CA264_15505 0.38 +0.4 3,631,460 + CA264_15505 0.38 -0.1 3,631,460 + CA264_15505 0.38 +1.5 3,631,461 - CA264_15505 0.39 -0.2 3,631,461 - CA264_15505 0.39 -0.2 3,631,574 - CA264_15505 0.53 -0.0 3,631,590 + CA264_15505 0.55 +0.1 3,631,661 - CA264_15505 0.64 -0.8 3,631,680 + CA264_15505 0.66 +0.0 3,631,680 + CA264_15505 0.66 -0.1 3,631,681 - CA264_15505 0.66 +0.0 3,631,683 - CA264_15505 0.67 +0.0 3,631,683 - CA264_15505 0.67 -1.1 3,631,683 - CA264_15505 0.67 +0.4 3,631,689 + CA264_15505 0.67 -0.4 3,631,690 - CA264_15505 0.67 -0.6 3,631,690 - CA264_15505 0.67 -0.5 3,631,853 - CA264_15505 0.88 -0.0 3,631,926 + +1.7 3,631,967 - -0.8 3,631,967 - +1.0 3,631,968 + +0.5 3,631,969 - +0.7 3,632,069 + -2.1 3,632,070 - -1.0 3,632,078 + +0.2 3,632,082 + +0.7 3,632,116 + -0.2 3,632,116 + -0.6 3,632,116 + +0.3 3,632,116 + +0.1 3,632,135 + +0.4 3,632,228 - CA264_15510 0.25 +0.1 3,632,232 + CA264_15510 0.26 -0.4 3,632,232 + CA264_15510 0.26 -0.1 3,632,232 + CA264_15510 0.26 +1.3 3,632,235 - CA264_15510 0.27 -1.9 3,632,251 - CA264_15510 0.30 -0.9 3,632,297 - CA264_15510 0.38 +0.6 3,632,431 - CA264_15510 0.62 -0.4 3,632,512 + CA264_15510 0.76 -0.1 3,632,550 - CA264_15510 0.83 -0.9 3,632,551 + CA264_15510 0.83 +0.6 3,632,551 + CA264_15510 0.83 +0.5 3,632,555 + CA264_15510 0.84 +0.5 3,632,555 + CA264_15510 0.84 +1.2 3,632,555 + CA264_15510 0.84 -0.2 3,632,556 - CA264_15510 0.84 -0.5 3,632,577 + CA264_15510 0.88 +0.9 3,632,577 + CA264_15510 0.88 +0.4 3,632,577 + CA264_15510 0.88 +0.1 3,632,644 - +1.3 3,632,644 - -1.2 3,632,669 + -0.7 3,632,712 + +0.4 3,632,712 + +0.9 3,632,712 + +1.1 3,632,712 + +2.9 3,632,713 - -0.0 3,632,713 - -0.6 3,632,721 - -0.3 3,632,730 - +0.2 3,632,731 + +1.4 3,632,732 - +1.1 3,632,732 - -0.3 3,632,732 - +0.1 3,632,732 - -0.2 3,632,732 - +0.1 3,632,802 - -0.9 3,632,814 + +0.5 3,632,902 + CA264_15515 0.16 +1.5 3,632,903 - CA264_15515 0.16 -0.1 3,632,903 - CA264_15515 0.16 -1.2 3,632,906 + CA264_15515 0.16 +1.3 3,632,922 + CA264_15515 0.18 +0.1 3,633,058 - CA264_15515 0.31 +0.6 3,633,161 + CA264_15515 0.41 -0.8 3,633,279 + CA264_15515 0.53 +1.0 3,633,360 + CA264_15515 0.61 +0.1 3,633,361 - CA264_15515 0.61 -0.2
Or see this region's nucleotide sequence