Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14925 and CA264_14930 are separated by 231 nucleotides CA264_14930 and CA264_14935 are separated by 4 nucleotides CA264_14935 and CA264_14940 are separated by 97 nucleotides CA264_14940 and CA264_14945 are separated by 200 nucleotides
CA264_14925: CA264_14925 - hypothetical protein, at 3,508,147 to 3,508,485
_14925
CA264_14930: CA264_14930 - hypothetical protein, at 3,508,717 to 3,509,040
_14930
CA264_14935: CA264_14935 - sec-independent protein translocase TatC, at 3,509,045 to 3,509,437
_14935
CA264_14940: CA264_14940 - hypothetical protein, at 3,509,535 to 3,509,795
_14940
CA264_14945: CA264_14945 - RNA polymerase subunit sigma-24, at 3,509,996 to 3,510,598
_14945
Position (kb)
3509
3510 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3508.123 kb on + strand at 3508.237 kb on + strand, within CA264_14925 at 3508.242 kb on - strand, within CA264_14925 at 3508.278 kb on + strand, within CA264_14925 at 3508.342 kb on + strand, within CA264_14925 at 3508.431 kb on + strand, within CA264_14925 at 3508.498 kb on + strand at 3508.499 kb on - strand at 3508.563 kb on + strand at 3508.641 kb on + strand at 3508.641 kb on + strand at 3508.641 kb on + strand at 3508.641 kb on + strand at 3508.642 kb on - strand at 3508.642 kb on - strand at 3508.642 kb on - strand at 3508.642 kb on - strand at 3508.642 kb on - strand at 3508.691 kb on - strand at 3508.695 kb on + strand at 3508.696 kb on - strand at 3508.739 kb on + strand at 3508.778 kb on - strand, within CA264_14930 at 3508.778 kb on - strand, within CA264_14930 at 3508.806 kb on + strand, within CA264_14930 at 3508.867 kb on - strand, within CA264_14930 at 3508.934 kb on - strand, within CA264_14930 at 3509.038 kb on + strand at 3509.039 kb on - strand at 3509.092 kb on + strand, within CA264_14935 at 3509.092 kb on + strand, within CA264_14935 at 3509.093 kb on - strand, within CA264_14935 at 3509.099 kb on + strand, within CA264_14935 at 3509.099 kb on + strand, within CA264_14935 at 3509.100 kb on - strand, within CA264_14935 at 3509.187 kb on - strand, within CA264_14935 at 3509.226 kb on - strand, within CA264_14935 at 3509.435 kb on + strand at 3509.618 kb on + strand, within CA264_14940 at 3509.722 kb on + strand, within CA264_14940 at 3509.735 kb on + strand, within CA264_14940 at 3509.736 kb on - strand, within CA264_14940 at 3509.748 kb on - strand, within CA264_14940 at 3509.787 kb on + strand at 3509.788 kb on - strand at 3509.788 kb on - strand at 3509.791 kb on + strand at 3509.792 kb on - strand at 3509.792 kb on - strand at 3509.793 kb on + strand at 3509.794 kb on - strand at 3509.802 kb on + strand at 3509.865 kb on - strand at 3509.889 kb on - strand at 3509.900 kb on + strand at 3509.900 kb on + strand at 3509.956 kb on + strand at 3509.956 kb on + strand at 3509.956 kb on + strand at 3509.957 kb on - strand at 3509.963 kb on + strand at 3509.971 kb on + strand at 3509.972 kb on - strand at 3510.031 kb on - strand at 3510.076 kb on - strand, within CA264_14945 at 3510.076 kb on - strand, within CA264_14945 at 3510.101 kb on + strand, within CA264_14945 at 3510.102 kb on - strand, within CA264_14945 at 3510.110 kb on - strand, within CA264_14945 at 3510.114 kb on + strand, within CA264_14945 at 3510.134 kb on + strand, within CA264_14945 at 3510.181 kb on + strand, within CA264_14945 at 3510.181 kb on + strand, within CA264_14945
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,508,123 + -0.0 3,508,237 + CA264_14925 0.27 +0.4 3,508,242 - CA264_14925 0.28 +0.4 3,508,278 + CA264_14925 0.39 -0.2 3,508,342 + CA264_14925 0.58 -1.1 3,508,431 + CA264_14925 0.84 -1.0 3,508,498 + +0.4 3,508,499 - +1.2 3,508,563 + -1.0 3,508,641 + -1.4 3,508,641 + -1.0 3,508,641 + -0.3 3,508,641 + -0.3 3,508,642 - +0.5 3,508,642 - +0.4 3,508,642 - -0.3 3,508,642 - +0.3 3,508,642 - +1.0 3,508,691 - -0.2 3,508,695 + -0.8 3,508,696 - +0.4 3,508,739 + -0.0 3,508,778 - CA264_14930 0.19 -0.4 3,508,778 - CA264_14930 0.19 -0.3 3,508,806 + CA264_14930 0.27 -0.8 3,508,867 - CA264_14930 0.46 +0.5 3,508,934 - CA264_14930 0.67 -0.1 3,509,038 + -1.9 3,509,039 - +0.5 3,509,092 + CA264_14935 0.12 -1.7 3,509,092 + CA264_14935 0.12 -0.5 3,509,093 - CA264_14935 0.12 +0.1 3,509,099 + CA264_14935 0.14 -0.5 3,509,099 + CA264_14935 0.14 -0.0 3,509,100 - CA264_14935 0.14 +0.8 3,509,187 - CA264_14935 0.36 +0.2 3,509,226 - CA264_14935 0.46 -0.1 3,509,435 + -0.6 3,509,618 + CA264_14940 0.32 -0.0 3,509,722 + CA264_14940 0.72 -0.3 3,509,735 + CA264_14940 0.77 +0.7 3,509,736 - CA264_14940 0.77 +0.3 3,509,748 - CA264_14940 0.82 +2.1 3,509,787 + -1.5 3,509,788 - +0.9 3,509,788 - +0.3 3,509,791 + +0.8 3,509,792 - -0.2 3,509,792 - -1.1 3,509,793 + +1.1 3,509,794 - +0.2 3,509,802 + +0.4 3,509,865 - +0.6 3,509,889 - -0.1 3,509,900 + -0.4 3,509,900 + +1.0 3,509,956 + +1.2 3,509,956 + -0.8 3,509,956 + -1.4 3,509,957 - -3.1 3,509,963 + -2.7 3,509,971 + +1.5 3,509,972 - -1.0 3,510,031 - -3.0 3,510,076 - CA264_14945 0.13 -3.4 3,510,076 - CA264_14945 0.13 -1.7 3,510,101 + CA264_14945 0.17 -2.3 3,510,102 - CA264_14945 0.18 -4.4 3,510,110 - CA264_14945 0.19 -3.8 3,510,114 + CA264_14945 0.20 -3.4 3,510,134 + CA264_14945 0.23 -1.7 3,510,181 + CA264_14945 0.31 -1.6 3,510,181 + CA264_14945 0.31 -3.5
Or see this region's nucleotide sequence