Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14635 and CA264_14640 are separated by 17 nucleotides CA264_14640 and CA264_14645 are separated by 423 nucleotides CA264_14645 and CA264_14650 are separated by 94 nucleotides
CA264_14635: CA264_14635 - hypothetical protein, at 3,443,348 to 3,444,472
_14635
CA264_14640: CA264_14640 - peptidase M16, at 3,444,490 to 3,445,776
_14640
CA264_14645: CA264_14645 - 5S ribosomal RNA, at 3,446,200 to 3,446,311
_14645
CA264_14650: CA264_14650 - 23S ribosomal RNA, at 3,446,406 to 3,449,291
_14650
Position (kb)
3444
3445
3446 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3443.619 kb on - strand, within CA264_14635 at 3443.650 kb on + strand, within CA264_14635 at 3443.651 kb on - strand, within CA264_14635 at 3443.663 kb on + strand, within CA264_14635 at 3443.720 kb on + strand, within CA264_14635 at 3443.721 kb on - strand, within CA264_14635 at 3443.740 kb on - strand, within CA264_14635 at 3443.792 kb on + strand, within CA264_14635 at 3443.846 kb on - strand, within CA264_14635 at 3443.861 kb on - strand, within CA264_14635 at 3443.862 kb on + strand, within CA264_14635 at 3443.863 kb on - strand, within CA264_14635 at 3443.870 kb on - strand, within CA264_14635 at 3443.870 kb on - strand, within CA264_14635 at 3443.944 kb on - strand, within CA264_14635 at 3443.952 kb on - strand, within CA264_14635 at 3443.955 kb on - strand, within CA264_14635 at 3443.955 kb on - strand, within CA264_14635 at 3443.956 kb on + strand, within CA264_14635 at 3444.108 kb on - strand, within CA264_14635 at 3444.119 kb on - strand, within CA264_14635 at 3444.273 kb on - strand, within CA264_14635 at 3444.279 kb on - strand, within CA264_14635 at 3444.314 kb on + strand, within CA264_14635 at 3444.314 kb on + strand, within CA264_14635 at 3444.360 kb on + strand at 3444.365 kb on - strand at 3444.365 kb on - strand at 3444.366 kb on + strand at 3444.366 kb on + strand at 3444.367 kb on - strand at 3444.367 kb on - strand at 3444.367 kb on - strand at 3444.399 kb on - strand at 3444.399 kb on - strand at 3444.399 kb on - strand at 3444.399 kb on - strand at 3444.473 kb on + strand at 3444.486 kb on - strand at 3444.527 kb on + strand at 3444.527 kb on + strand at 3444.527 kb on + strand at 3444.527 kb on + strand at 3444.527 kb on + strand at 3444.528 kb on - strand at 3444.567 kb on + strand at 3444.568 kb on - strand at 3444.615 kb on + strand at 3444.743 kb on + strand, within CA264_14640 at 3444.806 kb on - strand, within CA264_14640 at 3444.821 kb on - strand, within CA264_14640 at 3444.821 kb on - strand, within CA264_14640 at 3444.822 kb on + strand, within CA264_14640 at 3444.822 kb on + strand, within CA264_14640 at 3444.823 kb on - strand, within CA264_14640 at 3444.845 kb on + strand, within CA264_14640 at 3444.906 kb on + strand, within CA264_14640 at 3444.946 kb on + strand, within CA264_14640 at 3444.947 kb on - strand, within CA264_14640 at 3444.977 kb on + strand, within CA264_14640 at 3444.997 kb on + strand, within CA264_14640 at 3444.997 kb on + strand, within CA264_14640 at 3444.997 kb on + strand, within CA264_14640 at 3444.998 kb on - strand, within CA264_14640 at 3445.057 kb on + strand, within CA264_14640 at 3445.112 kb on + strand, within CA264_14640 at 3445.188 kb on + strand, within CA264_14640 at 3445.189 kb on - strand, within CA264_14640 at 3445.200 kb on + strand, within CA264_14640 at 3445.203 kb on + strand, within CA264_14640 at 3445.203 kb on + strand, within CA264_14640 at 3445.204 kb on - strand, within CA264_14640 at 3445.265 kb on + strand, within CA264_14640 at 3445.266 kb on - strand, within CA264_14640 at 3445.270 kb on - strand, within CA264_14640 at 3445.271 kb on + strand, within CA264_14640 at 3445.307 kb on - strand, within CA264_14640 at 3445.345 kb on + strand, within CA264_14640 at 3445.374 kb on - strand, within CA264_14640 at 3445.390 kb on + strand, within CA264_14640 at 3445.397 kb on - strand, within CA264_14640 at 3445.440 kb on - strand, within CA264_14640 at 3445.440 kb on - strand, within CA264_14640 at 3445.487 kb on + strand, within CA264_14640 at 3445.532 kb on + strand, within CA264_14640 at 3445.565 kb on - strand, within CA264_14640 at 3445.593 kb on + strand, within CA264_14640 at 3445.594 kb on - strand, within CA264_14640 at 3445.594 kb on - strand, within CA264_14640 at 3445.621 kb on + strand, within CA264_14640 at 3445.622 kb on - strand, within CA264_14640 at 3445.622 kb on - strand, within CA264_14640 at 3445.624 kb on - strand, within CA264_14640 at 3445.661 kb on - strand at 3445.669 kb on + strand at 3445.669 kb on + strand at 3445.726 kb on + strand at 3445.726 kb on + strand at 3445.749 kb on + strand at 3445.774 kb on + strand at 3445.775 kb on - strand at 3445.810 kb on - strand at 3445.810 kb on - strand at 3445.860 kb on + strand at 3445.876 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,443,619 - CA264_14635 0.24 -0.1 3,443,650 + CA264_14635 0.27 -0.3 3,443,651 - CA264_14635 0.27 +0.5 3,443,663 + CA264_14635 0.28 +1.4 3,443,720 + CA264_14635 0.33 +0.2 3,443,721 - CA264_14635 0.33 -0.7 3,443,740 - CA264_14635 0.35 -0.4 3,443,792 + CA264_14635 0.39 +0.1 3,443,846 - CA264_14635 0.44 -0.4 3,443,861 - CA264_14635 0.46 -0.1 3,443,862 + CA264_14635 0.46 -3.1 3,443,863 - CA264_14635 0.46 -0.6 3,443,870 - CA264_14635 0.46 +0.1 3,443,870 - CA264_14635 0.46 -0.0 3,443,944 - CA264_14635 0.53 +0.2 3,443,952 - CA264_14635 0.54 +0.4 3,443,955 - CA264_14635 0.54 -0.6 3,443,955 - CA264_14635 0.54 +0.4 3,443,956 + CA264_14635 0.54 -0.3 3,444,108 - CA264_14635 0.68 -0.1 3,444,119 - CA264_14635 0.69 +0.3 3,444,273 - CA264_14635 0.82 +0.7 3,444,279 - CA264_14635 0.83 -0.2 3,444,314 + CA264_14635 0.86 -0.1 3,444,314 + CA264_14635 0.86 -0.1 3,444,360 + -0.5 3,444,365 - -0.4 3,444,365 - +0.1 3,444,366 + -0.9 3,444,366 + -0.8 3,444,367 - -1.3 3,444,367 - -1.4 3,444,367 - +0.4 3,444,399 - +0.6 3,444,399 - +0.2 3,444,399 - -0.1 3,444,399 - -0.0 3,444,473 + +0.3 3,444,486 - -0.0 3,444,527 + -0.0 3,444,527 + -0.7 3,444,527 + -1.3 3,444,527 + +1.7 3,444,527 + -0.5 3,444,528 - -0.0 3,444,567 + -0.3 3,444,568 - -0.2 3,444,615 + -0.4 3,444,743 + CA264_14640 0.20 -0.5 3,444,806 - CA264_14640 0.25 -1.5 3,444,821 - CA264_14640 0.26 -0.3 3,444,821 - CA264_14640 0.26 -0.1 3,444,822 + CA264_14640 0.26 +0.8 3,444,822 + CA264_14640 0.26 -0.5 3,444,823 - CA264_14640 0.26 -0.3 3,444,845 + CA264_14640 0.28 +1.0 3,444,906 + CA264_14640 0.32 -0.2 3,444,946 + CA264_14640 0.35 +1.0 3,444,947 - CA264_14640 0.36 +0.0 3,444,977 + CA264_14640 0.38 -0.9 3,444,997 + CA264_14640 0.39 -0.4 3,444,997 + CA264_14640 0.39 -0.4 3,444,997 + CA264_14640 0.39 -0.3 3,444,998 - CA264_14640 0.39 +0.1 3,445,057 + CA264_14640 0.44 -0.2 3,445,112 + CA264_14640 0.48 -1.2 3,445,188 + CA264_14640 0.54 +0.1 3,445,189 - CA264_14640 0.54 +1.5 3,445,200 + CA264_14640 0.55 -1.2 3,445,203 + CA264_14640 0.55 +0.2 3,445,203 + CA264_14640 0.55 -0.3 3,445,204 - CA264_14640 0.55 -1.0 3,445,265 + CA264_14640 0.60 -0.6 3,445,266 - CA264_14640 0.60 +0.8 3,445,270 - CA264_14640 0.61 -0.1 3,445,271 + CA264_14640 0.61 -0.0 3,445,307 - CA264_14640 0.63 -0.8 3,445,345 + CA264_14640 0.66 -1.2 3,445,374 - CA264_14640 0.69 +0.5 3,445,390 + CA264_14640 0.70 -1.2 3,445,397 - CA264_14640 0.70 -0.1 3,445,440 - CA264_14640 0.74 -0.8 3,445,440 - CA264_14640 0.74 -1.7 3,445,487 + CA264_14640 0.77 -0.5 3,445,532 + CA264_14640 0.81 -0.3 3,445,565 - CA264_14640 0.84 -1.0 3,445,593 + CA264_14640 0.86 -0.3 3,445,594 - CA264_14640 0.86 -0.2 3,445,594 - CA264_14640 0.86 -0.8 3,445,621 + CA264_14640 0.88 -0.1 3,445,622 - CA264_14640 0.88 -1.4 3,445,622 - CA264_14640 0.88 -0.4 3,445,624 - CA264_14640 0.88 +0.1 3,445,661 - +0.3 3,445,669 + +1.1 3,445,669 + -0.4 3,445,726 + -1.0 3,445,726 + -1.7 3,445,749 + -0.7 3,445,774 + -0.5 3,445,775 - +0.0 3,445,810 - -0.5 3,445,810 - -0.5 3,445,860 + -1.4 3,445,876 - +1.1
Or see this region's nucleotide sequence