Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13460 and CA264_13465 are separated by 75 nucleotides CA264_13465 and CA264_13470 are separated by 59 nucleotides CA264_13470 and CA264_13475 are separated by 18 nucleotides
CA264_13460: CA264_13460 - hypothetical protein, at 3,144,935 to 3,145,369
_13460
CA264_13465: CA264_13465 - hypothetical protein, at 3,145,445 to 3,146,212
_13465
CA264_13470: CA264_13470 - cysteine synthase A, at 3,146,272 to 3,147,189
_13470
CA264_13475: CA264_13475 - serine acetyltransferase, at 3,147,208 to 3,148,041
_13475
Position (kb)
3146
3147
3148 Strain fitness (log2 ratio)
-2
-1
0
1 at 3145.368 kb on - strand at 3145.408 kb on + strand at 3145.536 kb on + strand, within CA264_13465 at 3145.537 kb on - strand, within CA264_13465 at 3145.611 kb on + strand, within CA264_13465 at 3145.656 kb on - strand, within CA264_13465 at 3145.806 kb on + strand, within CA264_13465 at 3145.807 kb on - strand, within CA264_13465 at 3145.875 kb on - strand, within CA264_13465 at 3145.887 kb on - strand, within CA264_13465 at 3145.887 kb on - strand, within CA264_13465 at 3146.028 kb on - strand, within CA264_13465 at 3146.028 kb on - strand, within CA264_13465 at 3146.129 kb on + strand, within CA264_13465 at 3146.130 kb on - strand, within CA264_13465 at 3146.273 kb on + strand at 3146.273 kb on + strand at 3146.503 kb on - strand, within CA264_13470 at 3146.732 kb on - strand, within CA264_13470 at 3148.058 kb on + strand at 3148.078 kb on + strand at 3148.108 kb on - strand at 3148.113 kb on - strand at 3148.133 kb on + strand at 3148.133 kb on + strand at 3148.134 kb on - strand at 3148.175 kb on + strand at 3148.184 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,145,368 - +0.3 3,145,408 + +0.3 3,145,536 + CA264_13465 0.12 -0.4 3,145,537 - CA264_13465 0.12 +0.2 3,145,611 + CA264_13465 0.22 -0.3 3,145,656 - CA264_13465 0.27 -0.4 3,145,806 + CA264_13465 0.47 +0.1 3,145,807 - CA264_13465 0.47 -0.1 3,145,875 - CA264_13465 0.56 +0.1 3,145,887 - CA264_13465 0.58 +0.0 3,145,887 - CA264_13465 0.58 -0.6 3,146,028 - CA264_13465 0.76 -0.3 3,146,028 - CA264_13465 0.76 +0.0 3,146,129 + CA264_13465 0.89 -0.2 3,146,130 - CA264_13465 0.89 -1.6 3,146,273 + -1.6 3,146,273 + +1.1 3,146,503 - CA264_13470 0.25 -1.7 3,146,732 - CA264_13470 0.50 -1.1 3,148,058 + +0.0 3,148,078 + +0.7 3,148,108 - -1.8 3,148,113 - -1.5 3,148,133 + -0.7 3,148,133 + -2.1 3,148,134 - -0.7 3,148,175 + -0.7 3,148,184 - -1.7
Or see this region's nucleotide sequence