Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13120 and CA264_13125 are separated by 100 nucleotides CA264_13125 and CA264_13130 are separated by 44 nucleotides CA264_13130 and CA264_13135 are separated by 159 nucleotides CA264_13135 and CA264_13140 are separated by 125 nucleotides
CA264_13120: CA264_13120 - hypothetical protein, at 3,060,685 to 3,060,924
_13120
CA264_13125: CA264_13125 - RNA polymerase subunit sigma-70, at 3,061,025 to 3,061,597
_13125
CA264_13130: CA264_13130 - peptidase S1, at 3,061,642 to 3,062,730
_13130
CA264_13135: CA264_13135 - hypothetical protein, at 3,062,890 to 3,063,603
_13135
CA264_13140: CA264_13140 - hypothetical protein, at 3,063,729 to 3,064,421
_13140
Position (kb)
3061
3062
3063 Strain fitness (log2 ratio)
-2
-1
0
1 at 3060.654 kb on + strand at 3060.661 kb on + strand at 3060.677 kb on - strand at 3060.681 kb on - strand at 3060.851 kb on - strand, within CA264_13120 at 3060.940 kb on - strand at 3061.062 kb on + strand at 3061.062 kb on + strand at 3061.062 kb on + strand at 3061.128 kb on + strand, within CA264_13125 at 3061.139 kb on - strand, within CA264_13125 at 3061.182 kb on - strand, within CA264_13125 at 3061.216 kb on - strand, within CA264_13125 at 3061.256 kb on + strand, within CA264_13125 at 3061.262 kb on + strand, within CA264_13125 at 3061.262 kb on + strand, within CA264_13125 at 3061.340 kb on - strand, within CA264_13125 at 3061.347 kb on + strand, within CA264_13125 at 3061.458 kb on - strand, within CA264_13125 at 3061.460 kb on + strand, within CA264_13125 at 3061.460 kb on + strand, within CA264_13125 at 3061.464 kb on + strand, within CA264_13125 at 3061.464 kb on + strand, within CA264_13125 at 3061.465 kb on - strand, within CA264_13125 at 3061.506 kb on - strand, within CA264_13125 at 3061.538 kb on + strand, within CA264_13125 at 3061.593 kb on + strand at 3061.596 kb on - strand at 3061.596 kb on - strand at 3061.596 kb on - strand at 3061.605 kb on - strand at 3061.609 kb on + strand at 3061.651 kb on + strand at 3061.651 kb on + strand at 3061.660 kb on + strand at 3061.670 kb on + strand at 3061.678 kb on + strand at 3061.818 kb on - strand, within CA264_13130 at 3061.985 kb on + strand, within CA264_13130 at 3062.017 kb on + strand, within CA264_13130 at 3062.018 kb on - strand, within CA264_13130 at 3062.082 kb on + strand, within CA264_13130 at 3062.163 kb on - strand, within CA264_13130 at 3062.245 kb on + strand, within CA264_13130 at 3062.320 kb on + strand, within CA264_13130 at 3062.320 kb on + strand, within CA264_13130 at 3062.321 kb on - strand, within CA264_13130 at 3062.321 kb on - strand, within CA264_13130 at 3062.597 kb on + strand, within CA264_13130 at 3062.597 kb on + strand, within CA264_13130 at 3062.598 kb on - strand, within CA264_13130 at 3062.728 kb on + strand at 3062.728 kb on + strand at 3062.729 kb on - strand at 3062.733 kb on - strand at 3062.733 kb on - strand at 3062.742 kb on - strand at 3062.834 kb on - strand at 3062.838 kb on + strand at 3062.849 kb on - strand at 3062.852 kb on - strand at 3062.852 kb on - strand at 3062.871 kb on + strand at 3062.873 kb on + strand at 3062.874 kb on - strand at 3062.879 kb on - strand at 3062.889 kb on + strand at 3062.909 kb on + strand at 3062.909 kb on + strand at 3062.909 kb on + strand at 3062.915 kb on + strand at 3062.931 kb on + strand at 3062.931 kb on + strand at 3062.936 kb on + strand at 3062.936 kb on + strand at 3062.937 kb on - strand at 3062.937 kb on - strand at 3062.962 kb on - strand, within CA264_13135 at 3062.962 kb on - strand, within CA264_13135 at 3062.964 kb on + strand, within CA264_13135 at 3062.964 kb on + strand, within CA264_13135 at 3062.965 kb on - strand, within CA264_13135 at 3062.965 kb on - strand, within CA264_13135 at 3062.965 kb on - strand, within CA264_13135 at 3063.043 kb on + strand, within CA264_13135 at 3063.043 kb on + strand, within CA264_13135 at 3063.043 kb on + strand, within CA264_13135 at 3063.043 kb on + strand, within CA264_13135 at 3063.044 kb on - strand, within CA264_13135 at 3063.044 kb on - strand, within CA264_13135 at 3063.049 kb on + strand, within CA264_13135 at 3063.049 kb on + strand, within CA264_13135 at 3063.049 kb on + strand, within CA264_13135 at 3063.049 kb on + strand, within CA264_13135 at 3063.049 kb on + strand, within CA264_13135 at 3063.102 kb on + strand, within CA264_13135 at 3063.102 kb on + strand, within CA264_13135 at 3063.119 kb on - strand, within CA264_13135 at 3063.158 kb on - strand, within CA264_13135 at 3063.164 kb on + strand, within CA264_13135 at 3063.164 kb on + strand, within CA264_13135 at 3063.165 kb on - strand, within CA264_13135 at 3063.165 kb on - strand, within CA264_13135 at 3063.176 kb on + strand, within CA264_13135 at 3063.177 kb on - strand, within CA264_13135 at 3063.251 kb on + strand, within CA264_13135 at 3063.256 kb on - strand, within CA264_13135 at 3063.299 kb on + strand, within CA264_13135 at 3063.300 kb on - strand, within CA264_13135 at 3063.442 kb on + strand, within CA264_13135 at 3063.442 kb on + strand, within CA264_13135 at 3063.442 kb on + strand, within CA264_13135 at 3063.443 kb on - strand, within CA264_13135 at 3063.507 kb on + strand, within CA264_13135 at 3063.543 kb on - strand at 3063.618 kb on - strand at 3063.618 kb on - strand at 3063.707 kb on + strand at 3063.707 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,060,654 + +1.0 3,060,661 + +0.6 3,060,677 - +0.2 3,060,681 - -1.8 3,060,851 - CA264_13120 0.69 +0.3 3,060,940 - +0.0 3,061,062 + -0.6 3,061,062 + -0.5 3,061,062 + -1.4 3,061,128 + CA264_13125 0.18 -0.2 3,061,139 - CA264_13125 0.20 -1.0 3,061,182 - CA264_13125 0.27 -1.1 3,061,216 - CA264_13125 0.33 -1.1 3,061,256 + CA264_13125 0.40 -0.9 3,061,262 + CA264_13125 0.41 +0.0 3,061,262 + CA264_13125 0.41 -0.1 3,061,340 - CA264_13125 0.55 -0.7 3,061,347 + CA264_13125 0.56 +0.0 3,061,458 - CA264_13125 0.76 -1.6 3,061,460 + CA264_13125 0.76 -1.8 3,061,460 + CA264_13125 0.76 +1.0 3,061,464 + CA264_13125 0.77 +0.9 3,061,464 + CA264_13125 0.77 -1.4 3,061,465 - CA264_13125 0.77 +0.8 3,061,506 - CA264_13125 0.84 -0.6 3,061,538 + CA264_13125 0.90 -1.0 3,061,593 + -0.1 3,061,596 - +0.4 3,061,596 - +1.3 3,061,596 - +1.6 3,061,605 - +0.6 3,061,609 + -0.5 3,061,651 + +0.1 3,061,651 + -1.7 3,061,660 + +0.2 3,061,670 + -0.3 3,061,678 + -0.4 3,061,818 - CA264_13130 0.16 -0.1 3,061,985 + CA264_13130 0.31 +0.2 3,062,017 + CA264_13130 0.34 +0.2 3,062,018 - CA264_13130 0.35 +0.0 3,062,082 + CA264_13130 0.40 +0.1 3,062,163 - CA264_13130 0.48 +1.0 3,062,245 + CA264_13130 0.55 +0.5 3,062,320 + CA264_13130 0.62 +0.8 3,062,320 + CA264_13130 0.62 -0.8 3,062,321 - CA264_13130 0.62 +1.3 3,062,321 - CA264_13130 0.62 +0.4 3,062,597 + CA264_13130 0.88 -0.4 3,062,597 + CA264_13130 0.88 +0.7 3,062,598 - CA264_13130 0.88 +0.6 3,062,728 + -0.5 3,062,728 + -0.2 3,062,729 - +0.4 3,062,733 - -0.1 3,062,733 - -0.4 3,062,742 - -0.0 3,062,834 - -0.2 3,062,838 + +0.9 3,062,849 - +1.6 3,062,852 - -0.6 3,062,852 - -0.6 3,062,871 + -0.2 3,062,873 + -0.6 3,062,874 - +1.2 3,062,879 - -0.3 3,062,889 + -0.3 3,062,909 + -0.9 3,062,909 + -1.0 3,062,909 + -1.0 3,062,915 + +0.0 3,062,931 + -0.1 3,062,931 + +0.7 3,062,936 + +0.4 3,062,936 + -0.7 3,062,937 - -0.2 3,062,937 - +0.2 3,062,962 - CA264_13135 0.10 -0.0 3,062,962 - CA264_13135 0.10 +0.6 3,062,964 + CA264_13135 0.10 +0.3 3,062,964 + CA264_13135 0.10 -0.7 3,062,965 - CA264_13135 0.11 +0.0 3,062,965 - CA264_13135 0.11 -0.6 3,062,965 - CA264_13135 0.11 +0.3 3,063,043 + CA264_13135 0.21 +0.1 3,063,043 + CA264_13135 0.21 -1.6 3,063,043 + CA264_13135 0.21 +0.3 3,063,043 + CA264_13135 0.21 +0.2 3,063,044 - CA264_13135 0.22 +0.1 3,063,044 - CA264_13135 0.22 +0.2 3,063,049 + CA264_13135 0.22 -0.8 3,063,049 + CA264_13135 0.22 -0.7 3,063,049 + CA264_13135 0.22 -1.4 3,063,049 + CA264_13135 0.22 -1.7 3,063,049 + CA264_13135 0.22 +1.6 3,063,102 + CA264_13135 0.30 -1.4 3,063,102 + CA264_13135 0.30 -1.4 3,063,119 - CA264_13135 0.32 +0.6 3,063,158 - CA264_13135 0.38 +0.8 3,063,164 + CA264_13135 0.38 -1.0 3,063,164 + CA264_13135 0.38 +0.4 3,063,165 - CA264_13135 0.39 -0.1 3,063,165 - CA264_13135 0.39 +0.6 3,063,176 + CA264_13135 0.40 -0.2 3,063,177 - CA264_13135 0.40 +0.3 3,063,251 + CA264_13135 0.51 -0.2 3,063,256 - CA264_13135 0.51 -1.0 3,063,299 + CA264_13135 0.57 -1.6 3,063,300 - CA264_13135 0.57 -0.1 3,063,442 + CA264_13135 0.77 -0.2 3,063,442 + CA264_13135 0.77 -0.2 3,063,442 + CA264_13135 0.77 -0.6 3,063,443 - CA264_13135 0.77 +0.6 3,063,507 + CA264_13135 0.86 -0.5 3,063,543 - +0.6 3,063,618 - +0.0 3,063,618 - -0.2 3,063,707 + +0.3 3,063,707 + +0.3
Or see this region's nucleotide sequence