Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12500 and CA264_12505 overlap by 4 nucleotides CA264_12505 and CA264_12510 overlap by 11 nucleotides CA264_12510 and CA264_12515 are separated by 360 nucleotides
CA264_12500: CA264_12500 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 2,911,113 to 2,912,507
_12500
CA264_12505: CA264_12505 - acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 2,912,504 to 2,913,295
_12505
CA264_12510: CA264_12510 - ABC transporter ATP-binding protein, at 2,913,285 to 2,913,917
_12510
CA264_12515: CA264_12515 - YebC/PmpR family DNA-binding transcriptional regulator, at 2,914,278 to 2,914,985
_12515
Position (kb)
2912
2913
2914 Strain fitness (log2 ratio)
-1
0
1
2 at 2912.491 kb on + strand at 2912.518 kb on - strand at 2912.527 kb on - strand at 2913.915 kb on + strand at 2913.943 kb on + strand at 2913.943 kb on + strand at 2913.972 kb on + strand at 2913.972 kb on + strand at 2913.973 kb on - strand at 2913.973 kb on - strand at 2913.979 kb on - strand at 2914.004 kb on - strand at 2914.023 kb on + strand at 2914.049 kb on + strand at 2914.070 kb on - strand at 2914.070 kb on - strand at 2914.127 kb on + strand at 2914.145 kb on + strand at 2914.145 kb on + strand at 2914.146 kb on - strand at 2914.149 kb on + strand at 2914.227 kb on - strand at 2914.235 kb on - strand at 2914.277 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,912,491 + -0.2 2,912,518 - -0.0 2,912,527 - -0.6 2,913,915 + -0.6 2,913,943 + -0.7 2,913,943 + -0.1 2,913,972 + +0.2 2,913,972 + -0.4 2,913,973 - +0.2 2,913,973 - +0.6 2,913,979 - -0.1 2,914,004 - -1.0 2,914,023 + +0.5 2,914,049 + -0.6 2,914,070 - -0.4 2,914,070 - -1.1 2,914,127 + -1.5 2,914,145 + -1.5 2,914,145 + -1.4 2,914,146 - -0.8 2,914,149 + -1.3 2,914,227 - -0.5 2,914,235 - +1.9 2,914,277 + -0.4
Or see this region's nucleotide sequence