Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11970 and CA264_11975 are separated by 72 nucleotides CA264_11975 and CA264_11980 are separated by 102 nucleotides CA264_11980 and CA264_11985 are separated by 187 nucleotides
CA264_11970: CA264_11970 - hypothetical protein, at 2,781,794 to 2,782,222
_11970
CA264_11975: CA264_11975 - hypothetical protein, at 2,782,295 to 2,782,684
_11975
CA264_11980: CA264_11980 - DUF885 domain-containing protein, at 2,782,787 to 2,784,595
_11980
CA264_11985: CA264_11985 - dipeptidase E, at 2,784,783 to 2,785,502
_11985
Position (kb)
2782
2783
2784
2785 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2781.840 kb on - strand, within CA264_11970 at 2781.993 kb on - strand, within CA264_11970 at 2781.993 kb on - strand, within CA264_11970 at 2782.030 kb on - strand, within CA264_11970 at 2782.155 kb on + strand, within CA264_11970 at 2782.194 kb on - strand at 2782.199 kb on - strand at 2782.218 kb on - strand at 2782.220 kb on + strand at 2782.239 kb on - strand at 2782.246 kb on + strand at 2782.257 kb on + strand at 2782.285 kb on + strand at 2782.378 kb on + strand, within CA264_11975 at 2782.422 kb on - strand, within CA264_11975 at 2782.523 kb on - strand, within CA264_11975 at 2782.523 kb on - strand, within CA264_11975 at 2782.904 kb on + strand at 2782.937 kb on + strand at 2782.989 kb on + strand, within CA264_11980 at 2782.989 kb on + strand, within CA264_11980 at 2782.990 kb on - strand, within CA264_11980 at 2782.997 kb on + strand, within CA264_11980 at 2783.090 kb on + strand, within CA264_11980 at 2783.091 kb on - strand, within CA264_11980 at 2783.091 kb on - strand, within CA264_11980 at 2783.146 kb on - strand, within CA264_11980 at 2783.286 kb on + strand, within CA264_11980 at 2783.334 kb on - strand, within CA264_11980 at 2783.343 kb on + strand, within CA264_11980 at 2783.370 kb on + strand, within CA264_11980 at 2783.371 kb on - strand, within CA264_11980 at 2783.371 kb on - strand, within CA264_11980 at 2783.371 kb on - strand, within CA264_11980 at 2783.371 kb on - strand, within CA264_11980 at 2783.593 kb on - strand, within CA264_11980 at 2783.593 kb on - strand, within CA264_11980 at 2783.640 kb on - strand, within CA264_11980 at 2783.720 kb on - strand, within CA264_11980 at 2783.748 kb on + strand, within CA264_11980 at 2783.805 kb on + strand, within CA264_11980 at 2783.805 kb on + strand, within CA264_11980 at 2783.826 kb on + strand, within CA264_11980 at 2783.826 kb on + strand, within CA264_11980 at 2783.874 kb on + strand, within CA264_11980 at 2783.908 kb on + strand, within CA264_11980 at 2784.031 kb on + strand, within CA264_11980 at 2784.031 kb on + strand, within CA264_11980 at 2784.031 kb on + strand, within CA264_11980 at 2784.032 kb on - strand, within CA264_11980 at 2784.032 kb on - strand, within CA264_11980 at 2784.035 kb on + strand, within CA264_11980 at 2784.056 kb on + strand, within CA264_11980 at 2784.089 kb on + strand, within CA264_11980 at 2784.112 kb on - strand, within CA264_11980 at 2784.253 kb on + strand, within CA264_11980 at 2784.253 kb on + strand, within CA264_11980 at 2784.253 kb on + strand, within CA264_11980 at 2784.254 kb on - strand, within CA264_11980 at 2784.254 kb on - strand, within CA264_11980 at 2784.264 kb on + strand, within CA264_11980 at 2784.264 kb on + strand, within CA264_11980 at 2784.264 kb on + strand, within CA264_11980 at 2784.265 kb on - strand, within CA264_11980 at 2784.286 kb on + strand, within CA264_11980 at 2784.333 kb on + strand, within CA264_11980 at 2784.393 kb on + strand, within CA264_11980 at 2784.450 kb on + strand at 2784.451 kb on - strand at 2784.652 kb on + strand at 2784.652 kb on + strand at 2784.703 kb on + strand at 2784.703 kb on + strand at 2784.704 kb on - strand at 2784.704 kb on - strand at 2784.704 kb on - strand at 2784.710 kb on + strand at 2784.710 kb on + strand at 2784.746 kb on + strand at 2784.785 kb on - strand at 2784.788 kb on - strand at 2784.788 kb on - strand at 2784.788 kb on - strand at 2784.797 kb on + strand at 2784.819 kb on - strand at 2784.819 kb on - strand at 2784.911 kb on + strand, within CA264_11985 at 2784.912 kb on - strand, within CA264_11985 at 2785.147 kb on + strand, within CA264_11985 at 2785.148 kb on - strand, within CA264_11985 at 2785.194 kb on - strand, within CA264_11985 at 2785.227 kb on - strand, within CA264_11985 at 2785.227 kb on - strand, within CA264_11985 at 2785.348 kb on + strand, within CA264_11985 at 2785.389 kb on - strand, within CA264_11985 at 2785.425 kb on + strand, within CA264_11985 at 2785.486 kb on - strand at 2785.486 kb on - strand at 2785.488 kb on + strand at 2785.503 kb on - strand at 2785.585 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,781,840 - CA264_11970 0.11 +0.6 2,781,993 - CA264_11970 0.46 +0.2 2,781,993 - CA264_11970 0.46 +0.1 2,782,030 - CA264_11970 0.55 +1.0 2,782,155 + CA264_11970 0.84 -0.8 2,782,194 - +0.1 2,782,199 - -0.3 2,782,218 - -1.0 2,782,220 + -0.4 2,782,239 - -0.5 2,782,246 + +1.0 2,782,257 + -1.8 2,782,285 + -1.0 2,782,378 + CA264_11975 0.21 -0.4 2,782,422 - CA264_11975 0.33 -0.6 2,782,523 - CA264_11975 0.58 +0.2 2,782,523 - CA264_11975 0.58 +0.2 2,782,904 + +0.3 2,782,937 + +0.1 2,782,989 + CA264_11980 0.11 +0.8 2,782,989 + CA264_11980 0.11 +1.1 2,782,990 - CA264_11980 0.11 -0.9 2,782,997 + CA264_11980 0.12 -1.5 2,783,090 + CA264_11980 0.17 +0.1 2,783,091 - CA264_11980 0.17 +0.2 2,783,091 - CA264_11980 0.17 -0.9 2,783,146 - CA264_11980 0.20 -0.7 2,783,286 + CA264_11980 0.28 +0.5 2,783,334 - CA264_11980 0.30 -0.0 2,783,343 + CA264_11980 0.31 +0.1 2,783,370 + CA264_11980 0.32 -0.2 2,783,371 - CA264_11980 0.32 -0.2 2,783,371 - CA264_11980 0.32 +0.8 2,783,371 - CA264_11980 0.32 +0.3 2,783,371 - CA264_11980 0.32 -0.5 2,783,593 - CA264_11980 0.45 -0.5 2,783,593 - CA264_11980 0.45 -0.5 2,783,640 - CA264_11980 0.47 -0.0 2,783,720 - CA264_11980 0.52 -0.0 2,783,748 + CA264_11980 0.53 -1.0 2,783,805 + CA264_11980 0.56 +0.6 2,783,805 + CA264_11980 0.56 -0.2 2,783,826 + CA264_11980 0.57 -0.0 2,783,826 + CA264_11980 0.57 +1.0 2,783,874 + CA264_11980 0.60 +0.3 2,783,908 + CA264_11980 0.62 +0.5 2,784,031 + CA264_11980 0.69 -0.5 2,784,031 + CA264_11980 0.69 +0.1 2,784,031 + CA264_11980 0.69 +0.0 2,784,032 - CA264_11980 0.69 -0.3 2,784,032 - CA264_11980 0.69 +1.3 2,784,035 + CA264_11980 0.69 +0.0 2,784,056 + CA264_11980 0.70 -0.2 2,784,089 + CA264_11980 0.72 +0.3 2,784,112 - CA264_11980 0.73 -0.5 2,784,253 + CA264_11980 0.81 +0.2 2,784,253 + CA264_11980 0.81 +1.7 2,784,253 + CA264_11980 0.81 +1.0 2,784,254 - CA264_11980 0.81 -0.6 2,784,254 - CA264_11980 0.81 +2.0 2,784,264 + CA264_11980 0.82 -0.4 2,784,264 + CA264_11980 0.82 +0.5 2,784,264 + CA264_11980 0.82 -0.0 2,784,265 - CA264_11980 0.82 -0.9 2,784,286 + CA264_11980 0.83 +0.2 2,784,333 + CA264_11980 0.85 +0.5 2,784,393 + CA264_11980 0.89 -0.2 2,784,450 + -0.0 2,784,451 - +0.3 2,784,652 + -0.2 2,784,652 + +0.5 2,784,703 + -0.4 2,784,703 + +0.1 2,784,704 - -1.5 2,784,704 - -0.1 2,784,704 - -0.5 2,784,710 + -1.5 2,784,710 + -0.0 2,784,746 + +0.2 2,784,785 - +0.1 2,784,788 - -0.2 2,784,788 - -0.1 2,784,788 - -0.9 2,784,797 + +1.2 2,784,819 - -0.7 2,784,819 - -0.3 2,784,911 + CA264_11985 0.18 -0.4 2,784,912 - CA264_11985 0.18 +1.9 2,785,147 + CA264_11985 0.51 +0.9 2,785,148 - CA264_11985 0.51 +0.1 2,785,194 - CA264_11985 0.57 +0.6 2,785,227 - CA264_11985 0.62 +0.1 2,785,227 - CA264_11985 0.62 +0.4 2,785,348 + CA264_11985 0.78 -0.5 2,785,389 - CA264_11985 0.84 +0.2 2,785,425 + CA264_11985 0.89 -0.1 2,785,486 - +1.5 2,785,486 - +1.0 2,785,488 + +0.3 2,785,503 - +0.9 2,785,585 + +0.4
Or see this region's nucleotide sequence