Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11450 and CA264_11455 are separated by 44 nucleotides CA264_11455 and CA264_11460 are separated by 10 nucleotides
CA264_11450: CA264_11450 - serine/threonine protein phosphatase, at 2,654,955 to 2,656,037
_11450
CA264_11455: CA264_11455 - RagB/SusD family nutrient uptake outer membrane protein, at 2,656,082 to 2,657,776
_11455
CA264_11460: CA264_11460 - SusC/RagA family TonB-linked outer membrane protein, at 2,657,787 to 2,660,840
_11460
Position (kb)
2656
2657
2658 Strain fitness (log2 ratio)
-2
-1
0
1 at 2655.202 kb on - strand, within CA264_11450 at 2655.202 kb on - strand, within CA264_11450 at 2655.329 kb on + strand, within CA264_11450 at 2655.352 kb on + strand, within CA264_11450 at 2655.361 kb on + strand, within CA264_11450 at 2655.362 kb on - strand, within CA264_11450 at 2655.396 kb on - strand, within CA264_11450 at 2655.398 kb on - strand, within CA264_11450 at 2655.398 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.433 kb on - strand, within CA264_11450 at 2655.483 kb on - strand, within CA264_11450 at 2655.536 kb on - strand, within CA264_11450 at 2655.598 kb on + strand, within CA264_11450 at 2655.626 kb on + strand, within CA264_11450 at 2655.626 kb on + strand, within CA264_11450 at 2655.650 kb on - strand, within CA264_11450 at 2655.650 kb on - strand, within CA264_11450 at 2655.827 kb on + strand, within CA264_11450 at 2655.865 kb on - strand, within CA264_11450 at 2655.867 kb on + strand, within CA264_11450 at 2655.868 kb on - strand, within CA264_11450 at 2655.891 kb on + strand, within CA264_11450 at 2655.891 kb on + strand, within CA264_11450 at 2655.891 kb on + strand, within CA264_11450 at 2655.895 kb on + strand, within CA264_11450 at 2655.896 kb on - strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.929 kb on - strand at 2656.044 kb on - strand at 2656.071 kb on + strand at 2656.072 kb on - strand at 2656.072 kb on - strand at 2656.074 kb on - strand at 2656.074 kb on - strand at 2656.074 kb on - strand at 2656.079 kb on + strand at 2656.079 kb on + strand at 2656.080 kb on - strand at 2656.083 kb on + strand at 2656.084 kb on - strand at 2656.084 kb on - strand at 2656.084 kb on - strand at 2656.087 kb on - strand at 2656.104 kb on - strand at 2656.150 kb on - strand at 2656.195 kb on + strand at 2656.260 kb on + strand, within CA264_11455 at 2656.260 kb on + strand, within CA264_11455 at 2656.321 kb on - strand, within CA264_11455 at 2656.495 kb on - strand, within CA264_11455 at 2656.516 kb on + strand, within CA264_11455 at 2656.517 kb on - strand, within CA264_11455 at 2656.557 kb on - strand, within CA264_11455 at 2656.557 kb on - strand, within CA264_11455 at 2656.572 kb on + strand, within CA264_11455 at 2656.580 kb on + strand, within CA264_11455 at 2656.580 kb on + strand, within CA264_11455 at 2656.677 kb on + strand, within CA264_11455 at 2656.678 kb on - strand, within CA264_11455 at 2656.686 kb on + strand, within CA264_11455 at 2656.686 kb on + strand, within CA264_11455 at 2656.687 kb on - strand, within CA264_11455 at 2656.690 kb on + strand, within CA264_11455 at 2656.690 kb on + strand, within CA264_11455 at 2656.690 kb on + strand, within CA264_11455 at 2656.694 kb on + strand, within CA264_11455 at 2656.694 kb on + strand, within CA264_11455 at 2656.695 kb on - strand, within CA264_11455 at 2656.695 kb on - strand, within CA264_11455 at 2656.758 kb on + strand, within CA264_11455 at 2656.759 kb on - strand, within CA264_11455 at 2656.766 kb on - strand, within CA264_11455 at 2656.772 kb on - strand, within CA264_11455 at 2656.773 kb on + strand, within CA264_11455 at 2656.773 kb on + strand, within CA264_11455 at 2656.774 kb on - strand, within CA264_11455 at 2656.774 kb on - strand, within CA264_11455 at 2656.878 kb on - strand, within CA264_11455 at 2656.903 kb on - strand, within CA264_11455 at 2657.055 kb on + strand, within CA264_11455 at 2657.065 kb on - strand, within CA264_11455 at 2657.098 kb on + strand, within CA264_11455 at 2657.099 kb on - strand, within CA264_11455 at 2657.099 kb on - strand, within CA264_11455 at 2657.099 kb on - strand, within CA264_11455 at 2657.099 kb on - strand, within CA264_11455 at 2657.099 kb on - strand, within CA264_11455 at 2657.142 kb on + strand, within CA264_11455 at 2657.143 kb on - strand, within CA264_11455 at 2657.143 kb on - strand, within CA264_11455 at 2657.144 kb on + strand, within CA264_11455 at 2657.183 kb on - strand, within CA264_11455 at 2657.212 kb on - strand, within CA264_11455 at 2657.254 kb on - strand, within CA264_11455 at 2657.309 kb on + strand, within CA264_11455 at 2657.309 kb on + strand, within CA264_11455 at 2657.309 kb on + strand, within CA264_11455 at 2657.310 kb on - strand, within CA264_11455 at 2657.310 kb on - strand, within CA264_11455 at 2657.319 kb on + strand, within CA264_11455 at 2657.320 kb on - strand, within CA264_11455 at 2657.347 kb on - strand, within CA264_11455 at 2657.347 kb on - strand, within CA264_11455 at 2657.349 kb on + strand, within CA264_11455 at 2657.459 kb on + strand, within CA264_11455 at 2657.465 kb on - strand, within CA264_11455 at 2657.479 kb on + strand, within CA264_11455 at 2657.480 kb on - strand, within CA264_11455 at 2657.488 kb on - strand, within CA264_11455 at 2657.488 kb on - strand, within CA264_11455 at 2657.578 kb on + strand, within CA264_11455 at 2657.602 kb on - strand, within CA264_11455 at 2657.626 kb on - strand at 2657.635 kb on - strand at 2657.645 kb on + strand at 2657.711 kb on + strand at 2657.712 kb on - strand at 2657.732 kb on + strand at 2657.733 kb on - strand at 2657.733 kb on - strand at 2657.753 kb on + strand at 2657.753 kb on + strand at 2657.754 kb on - strand at 2657.754 kb on - strand at 2657.756 kb on - strand at 2657.756 kb on - strand at 2657.762 kb on + strand at 2657.763 kb on - strand at 2657.763 kb on - strand at 2657.803 kb on - strand at 2657.803 kb on - strand at 2657.809 kb on - strand at 2657.830 kb on + strand at 2657.830 kb on + strand at 2657.913 kb on + strand at 2657.939 kb on + strand at 2657.959 kb on + strand at 2658.021 kb on - strand at 2658.054 kb on + strand at 2658.076 kb on - strand at 2658.098 kb on - strand, within CA264_11460 at 2658.098 kb on - strand, within CA264_11460 at 2658.199 kb on - strand, within CA264_11460 at 2658.252 kb on - strand, within CA264_11460 at 2658.252 kb on - strand, within CA264_11460 at 2658.260 kb on - strand, within CA264_11460 at 2658.286 kb on - strand, within CA264_11460 at 2658.302 kb on - strand, within CA264_11460 at 2658.312 kb on + strand, within CA264_11460 at 2658.351 kb on + strand, within CA264_11460 at 2658.355 kb on + strand, within CA264_11460 at 2658.356 kb on - strand, within CA264_11460 at 2658.356 kb on - strand, within CA264_11460 at 2658.383 kb on + strand, within CA264_11460 at 2658.384 kb on - strand, within CA264_11460 at 2658.384 kb on - strand, within CA264_11460 at 2658.442 kb on + strand, within CA264_11460 at 2658.442 kb on + strand, within CA264_11460 at 2658.503 kb on + strand, within CA264_11460 at 2658.503 kb on + strand, within CA264_11460 at 2658.504 kb on - strand, within CA264_11460 at 2658.504 kb on - strand, within CA264_11460 at 2658.504 kb on - strand, within CA264_11460 at 2658.504 kb on - strand, within CA264_11460 at 2658.573 kb on + strand, within CA264_11460 at 2658.578 kb on + strand, within CA264_11460 at 2658.578 kb on + strand, within CA264_11460 at 2658.615 kb on - strand, within CA264_11460 at 2658.620 kb on + strand, within CA264_11460 at 2658.657 kb on - strand, within CA264_11460 at 2658.658 kb on + strand, within CA264_11460 at 2658.658 kb on + strand, within CA264_11460 at 2658.658 kb on + strand, within CA264_11460 at 2658.659 kb on - strand, within CA264_11460 at 2658.659 kb on - strand, within CA264_11460 at 2658.667 kb on - strand, within CA264_11460 at 2658.705 kb on - strand, within CA264_11460 at 2658.705 kb on - strand, within CA264_11460 at 2658.709 kb on + strand, within CA264_11460 at 2658.735 kb on - strand, within CA264_11460 at 2658.745 kb on + strand, within CA264_11460 at 2658.745 kb on + strand, within CA264_11460 at 2658.745 kb on + strand, within CA264_11460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,655,202 - CA264_11450 0.23 +0.5 2,655,202 - CA264_11450 0.23 -0.8 2,655,329 + CA264_11450 0.35 +1.0 2,655,352 + CA264_11450 0.37 +0.2 2,655,361 + CA264_11450 0.37 -0.1 2,655,362 - CA264_11450 0.38 -1.5 2,655,396 - CA264_11450 0.41 -1.1 2,655,398 - CA264_11450 0.41 -0.2 2,655,398 - CA264_11450 0.41 -0.7 2,655,402 - CA264_11450 0.41 +0.4 2,655,402 - CA264_11450 0.41 -0.3 2,655,402 - CA264_11450 0.41 -0.2 2,655,433 - CA264_11450 0.44 -1.6 2,655,483 - CA264_11450 0.49 -0.5 2,655,536 - CA264_11450 0.54 -2.0 2,655,598 + CA264_11450 0.59 -0.1 2,655,626 + CA264_11450 0.62 +0.3 2,655,626 + CA264_11450 0.62 -0.2 2,655,650 - CA264_11450 0.64 -0.0 2,655,650 - CA264_11450 0.64 -0.0 2,655,827 + CA264_11450 0.81 +0.2 2,655,865 - CA264_11450 0.84 -0.7 2,655,867 + CA264_11450 0.84 -0.3 2,655,868 - CA264_11450 0.84 -0.9 2,655,891 + CA264_11450 0.86 +0.2 2,655,891 + CA264_11450 0.86 +0.1 2,655,891 + CA264_11450 0.86 +0.3 2,655,895 + CA264_11450 0.87 +1.6 2,655,896 - CA264_11450 0.87 -0.2 2,655,903 + CA264_11450 0.88 +0.2 2,655,903 + CA264_11450 0.88 -1.0 2,655,903 + CA264_11450 0.88 -1.3 2,655,903 + CA264_11450 0.88 -1.8 2,655,929 - +0.9 2,656,044 - -0.8 2,656,071 + -1.0 2,656,072 - -0.4 2,656,072 - +0.2 2,656,074 - -0.6 2,656,074 - -0.1 2,656,074 - +0.2 2,656,079 + +0.4 2,656,079 + +0.4 2,656,080 - -0.7 2,656,083 + -0.2 2,656,084 - +0.3 2,656,084 - -0.5 2,656,084 - -0.7 2,656,087 - -0.2 2,656,104 - -0.3 2,656,150 - -0.8 2,656,195 + +0.5 2,656,260 + CA264_11455 0.11 +0.2 2,656,260 + CA264_11455 0.11 +0.7 2,656,321 - CA264_11455 0.14 +1.0 2,656,495 - CA264_11455 0.24 -1.4 2,656,516 + CA264_11455 0.26 +1.1 2,656,517 - CA264_11455 0.26 -1.0 2,656,557 - CA264_11455 0.28 +0.5 2,656,557 - CA264_11455 0.28 -2.0 2,656,572 + CA264_11455 0.29 -0.6 2,656,580 + CA264_11455 0.29 +0.1 2,656,580 + CA264_11455 0.29 +0.1 2,656,677 + CA264_11455 0.35 +0.3 2,656,678 - CA264_11455 0.35 -0.5 2,656,686 + CA264_11455 0.36 +0.5 2,656,686 + CA264_11455 0.36 +1.0 2,656,687 - CA264_11455 0.36 -0.5 2,656,690 + CA264_11455 0.36 -0.7 2,656,690 + CA264_11455 0.36 -1.8 2,656,690 + CA264_11455 0.36 -1.5 2,656,694 + CA264_11455 0.36 +0.6 2,656,694 + CA264_11455 0.36 -1.1 2,656,695 - CA264_11455 0.36 +0.7 2,656,695 - CA264_11455 0.36 +0.7 2,656,758 + CA264_11455 0.40 +0.3 2,656,759 - CA264_11455 0.40 -0.9 2,656,766 - CA264_11455 0.40 -0.6 2,656,772 - CA264_11455 0.41 +0.7 2,656,773 + CA264_11455 0.41 -0.3 2,656,773 + CA264_11455 0.41 -0.3 2,656,774 - CA264_11455 0.41 -1.8 2,656,774 - CA264_11455 0.41 +0.3 2,656,878 - CA264_11455 0.47 -1.5 2,656,903 - CA264_11455 0.48 -1.0 2,657,055 + CA264_11455 0.57 -0.4 2,657,065 - CA264_11455 0.58 +0.5 2,657,098 + CA264_11455 0.60 -0.2 2,657,099 - CA264_11455 0.60 +1.2 2,657,099 - CA264_11455 0.60 -0.6 2,657,099 - CA264_11455 0.60 -0.3 2,657,099 - CA264_11455 0.60 -0.9 2,657,099 - CA264_11455 0.60 +0.1 2,657,142 + CA264_11455 0.63 -0.4 2,657,143 - CA264_11455 0.63 -0.0 2,657,143 - CA264_11455 0.63 -0.4 2,657,144 + CA264_11455 0.63 -0.2 2,657,183 - CA264_11455 0.65 -1.3 2,657,212 - CA264_11455 0.67 -0.7 2,657,254 - CA264_11455 0.69 -1.2 2,657,309 + CA264_11455 0.72 -0.4 2,657,309 + CA264_11455 0.72 +0.2 2,657,309 + CA264_11455 0.72 -0.9 2,657,310 - CA264_11455 0.72 -0.6 2,657,310 - CA264_11455 0.72 +0.5 2,657,319 + CA264_11455 0.73 -1.4 2,657,320 - CA264_11455 0.73 +0.1 2,657,347 - CA264_11455 0.75 +1.3 2,657,347 - CA264_11455 0.75 -1.5 2,657,349 + CA264_11455 0.75 +1.0 2,657,459 + CA264_11455 0.81 -0.4 2,657,465 - CA264_11455 0.82 -0.0 2,657,479 + CA264_11455 0.82 +0.5 2,657,480 - CA264_11455 0.82 -0.5 2,657,488 - CA264_11455 0.83 -0.6 2,657,488 - CA264_11455 0.83 -0.9 2,657,578 + CA264_11455 0.88 +1.0 2,657,602 - CA264_11455 0.90 -0.3 2,657,626 - -0.4 2,657,635 - -1.3 2,657,645 + +0.0 2,657,711 + +0.2 2,657,712 - +0.2 2,657,732 + -1.2 2,657,733 - -0.3 2,657,733 - -0.4 2,657,753 + -0.5 2,657,753 + +0.0 2,657,754 - -0.4 2,657,754 - -0.7 2,657,756 - -0.4 2,657,756 - -0.7 2,657,762 + +0.2 2,657,763 - -0.2 2,657,763 - -0.3 2,657,803 - -0.7 2,657,803 - +0.1 2,657,809 - -2.0 2,657,830 + -0.4 2,657,830 + -1.1 2,657,913 + -0.1 2,657,939 + +1.7 2,657,959 + -0.1 2,658,021 - -0.6 2,658,054 + +1.2 2,658,076 - -1.1 2,658,098 - CA264_11460 0.10 -1.3 2,658,098 - CA264_11460 0.10 -0.6 2,658,199 - CA264_11460 0.13 -0.4 2,658,252 - CA264_11460 0.15 -0.6 2,658,252 - CA264_11460 0.15 -0.4 2,658,260 - CA264_11460 0.15 -0.2 2,658,286 - CA264_11460 0.16 -1.2 2,658,302 - CA264_11460 0.17 -0.5 2,658,312 + CA264_11460 0.17 +0.6 2,658,351 + CA264_11460 0.18 +0.3 2,658,355 + CA264_11460 0.19 -1.9 2,658,356 - CA264_11460 0.19 -0.3 2,658,356 - CA264_11460 0.19 -0.7 2,658,383 + CA264_11460 0.20 +0.6 2,658,384 - CA264_11460 0.20 -0.7 2,658,384 - CA264_11460 0.20 -1.0 2,658,442 + CA264_11460 0.21 +0.8 2,658,442 + CA264_11460 0.21 +0.5 2,658,503 + CA264_11460 0.23 -0.7 2,658,503 + CA264_11460 0.23 -1.4 2,658,504 - CA264_11460 0.23 -0.4 2,658,504 - CA264_11460 0.23 -0.7 2,658,504 - CA264_11460 0.23 -0.3 2,658,504 - CA264_11460 0.23 -0.9 2,658,573 + CA264_11460 0.26 -0.5 2,658,578 + CA264_11460 0.26 -0.0 2,658,578 + CA264_11460 0.26 +0.4 2,658,615 - CA264_11460 0.27 -1.0 2,658,620 + CA264_11460 0.27 -1.0 2,658,657 - CA264_11460 0.28 -0.0 2,658,658 + CA264_11460 0.29 -0.1 2,658,658 + CA264_11460 0.29 +1.1 2,658,658 + CA264_11460 0.29 +0.9 2,658,659 - CA264_11460 0.29 +0.0 2,658,659 - CA264_11460 0.29 -0.3 2,658,667 - CA264_11460 0.29 -0.4 2,658,705 - CA264_11460 0.30 -1.0 2,658,705 - CA264_11460 0.30 -1.4 2,658,709 + CA264_11460 0.30 -2.2 2,658,735 - CA264_11460 0.31 +0.1 2,658,745 + CA264_11460 0.31 +1.1 2,658,745 + CA264_11460 0.31 -0.1 2,658,745 + CA264_11460 0.31 -0.2
Or see this region's nucleotide sequence