Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11445 and CA264_11450 are separated by 100 nucleotides CA264_11450 and CA264_11455 are separated by 44 nucleotides
CA264_11445: CA264_11445 - hypothetical protein, at 2,653,724 to 2,654,854
_11445
CA264_11450: CA264_11450 - serine/threonine protein phosphatase, at 2,654,955 to 2,656,037
_11450
CA264_11455: CA264_11455 - RagB/SusD family nutrient uptake outer membrane protein, at 2,656,082 to 2,657,776
_11455
Position (kb)
2654
2655
2656
2657 Strain fitness (log2 ratio)
-2
-1
0
1 at 2653.975 kb on + strand, within CA264_11445 at 2654.005 kb on + strand, within CA264_11445 at 2654.005 kb on + strand, within CA264_11445 at 2654.018 kb on - strand, within CA264_11445 at 2654.025 kb on + strand, within CA264_11445 at 2654.025 kb on + strand, within CA264_11445 at 2654.026 kb on - strand, within CA264_11445 at 2654.026 kb on - strand, within CA264_11445 at 2654.122 kb on + strand, within CA264_11445 at 2654.123 kb on - strand, within CA264_11445 at 2654.135 kb on + strand, within CA264_11445 at 2654.136 kb on - strand, within CA264_11445 at 2654.140 kb on + strand, within CA264_11445 at 2654.212 kb on + strand, within CA264_11445 at 2654.215 kb on - strand, within CA264_11445 at 2654.236 kb on + strand, within CA264_11445 at 2654.237 kb on - strand, within CA264_11445 at 2654.244 kb on - strand, within CA264_11445 at 2654.260 kb on - strand, within CA264_11445 at 2654.260 kb on - strand, within CA264_11445 at 2654.308 kb on + strand, within CA264_11445 at 2654.309 kb on - strand, within CA264_11445 at 2654.367 kb on + strand, within CA264_11445 at 2654.371 kb on + strand, within CA264_11445 at 2654.376 kb on + strand, within CA264_11445 at 2654.448 kb on + strand, within CA264_11445 at 2654.448 kb on + strand, within CA264_11445 at 2654.453 kb on + strand, within CA264_11445 at 2654.453 kb on + strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.536 kb on + strand, within CA264_11445 at 2654.536 kb on + strand, within CA264_11445 at 2654.536 kb on + strand, within CA264_11445 at 2654.537 kb on - strand, within CA264_11445 at 2654.556 kb on + strand, within CA264_11445 at 2654.579 kb on - strand, within CA264_11445 at 2654.646 kb on + strand, within CA264_11445 at 2654.647 kb on - strand, within CA264_11445 at 2654.647 kb on - strand, within CA264_11445 at 2654.647 kb on - strand, within CA264_11445 at 2654.649 kb on + strand, within CA264_11445 at 2654.650 kb on - strand, within CA264_11445 at 2654.799 kb on + strand at 2654.799 kb on + strand at 2654.800 kb on - strand at 2654.800 kb on - strand at 2654.864 kb on + strand at 2654.865 kb on - strand at 2654.946 kb on + strand at 2654.957 kb on - strand at 2654.973 kb on - strand at 2654.973 kb on - strand at 2654.984 kb on - strand at 2655.014 kb on + strand at 2655.014 kb on + strand at 2655.015 kb on - strand at 2655.202 kb on - strand, within CA264_11450 at 2655.202 kb on - strand, within CA264_11450 at 2655.329 kb on + strand, within CA264_11450 at 2655.352 kb on + strand, within CA264_11450 at 2655.361 kb on + strand, within CA264_11450 at 2655.362 kb on - strand, within CA264_11450 at 2655.396 kb on - strand, within CA264_11450 at 2655.398 kb on - strand, within CA264_11450 at 2655.398 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.433 kb on - strand, within CA264_11450 at 2655.483 kb on - strand, within CA264_11450 at 2655.536 kb on - strand, within CA264_11450 at 2655.598 kb on + strand, within CA264_11450 at 2655.626 kb on + strand, within CA264_11450 at 2655.626 kb on + strand, within CA264_11450 at 2655.650 kb on - strand, within CA264_11450 at 2655.650 kb on - strand, within CA264_11450 at 2655.827 kb on + strand, within CA264_11450 at 2655.865 kb on - strand, within CA264_11450 at 2655.867 kb on + strand, within CA264_11450 at 2655.868 kb on - strand, within CA264_11450 at 2655.891 kb on + strand, within CA264_11450 at 2655.891 kb on + strand, within CA264_11450 at 2655.891 kb on + strand, within CA264_11450 at 2655.895 kb on + strand, within CA264_11450 at 2655.896 kb on - strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.903 kb on + strand, within CA264_11450 at 2655.929 kb on - strand at 2656.044 kb on - strand at 2656.071 kb on + strand at 2656.072 kb on - strand at 2656.072 kb on - strand at 2656.074 kb on - strand at 2656.074 kb on - strand at 2656.074 kb on - strand at 2656.079 kb on + strand at 2656.079 kb on + strand at 2656.080 kb on - strand at 2656.083 kb on + strand at 2656.084 kb on - strand at 2656.084 kb on - strand at 2656.084 kb on - strand at 2656.087 kb on - strand at 2656.104 kb on - strand at 2656.150 kb on - strand at 2656.195 kb on + strand at 2656.260 kb on + strand, within CA264_11455 at 2656.260 kb on + strand, within CA264_11455 at 2656.321 kb on - strand, within CA264_11455 at 2656.495 kb on - strand, within CA264_11455 at 2656.516 kb on + strand, within CA264_11455 at 2656.517 kb on - strand, within CA264_11455 at 2656.557 kb on - strand, within CA264_11455 at 2656.557 kb on - strand, within CA264_11455 at 2656.572 kb on + strand, within CA264_11455 at 2656.580 kb on + strand, within CA264_11455 at 2656.580 kb on + strand, within CA264_11455 at 2656.677 kb on + strand, within CA264_11455 at 2656.678 kb on - strand, within CA264_11455 at 2656.686 kb on + strand, within CA264_11455 at 2656.686 kb on + strand, within CA264_11455 at 2656.687 kb on - strand, within CA264_11455 at 2656.690 kb on + strand, within CA264_11455 at 2656.690 kb on + strand, within CA264_11455 at 2656.690 kb on + strand, within CA264_11455 at 2656.694 kb on + strand, within CA264_11455 at 2656.694 kb on + strand, within CA264_11455 at 2656.695 kb on - strand, within CA264_11455 at 2656.695 kb on - strand, within CA264_11455 at 2656.758 kb on + strand, within CA264_11455 at 2656.759 kb on - strand, within CA264_11455 at 2656.766 kb on - strand, within CA264_11455 at 2656.772 kb on - strand, within CA264_11455 at 2656.773 kb on + strand, within CA264_11455 at 2656.773 kb on + strand, within CA264_11455 at 2656.774 kb on - strand, within CA264_11455 at 2656.774 kb on - strand, within CA264_11455 at 2656.878 kb on - strand, within CA264_11455 at 2656.903 kb on - strand, within CA264_11455
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,653,975 + CA264_11445 0.22 -0.1 2,654,005 + CA264_11445 0.25 +1.0 2,654,005 + CA264_11445 0.25 -0.9 2,654,018 - CA264_11445 0.26 +1.2 2,654,025 + CA264_11445 0.27 +0.7 2,654,025 + CA264_11445 0.27 -0.8 2,654,026 - CA264_11445 0.27 -1.2 2,654,026 - CA264_11445 0.27 -0.7 2,654,122 + CA264_11445 0.35 +0.3 2,654,123 - CA264_11445 0.35 -1.0 2,654,135 + CA264_11445 0.36 +0.2 2,654,136 - CA264_11445 0.36 -1.1 2,654,140 + CA264_11445 0.37 +0.3 2,654,212 + CA264_11445 0.43 +0.5 2,654,215 - CA264_11445 0.43 -0.1 2,654,236 + CA264_11445 0.45 -0.4 2,654,237 - CA264_11445 0.45 -0.5 2,654,244 - CA264_11445 0.46 -1.0 2,654,260 - CA264_11445 0.47 -0.0 2,654,260 - CA264_11445 0.47 -0.5 2,654,308 + CA264_11445 0.52 +0.6 2,654,309 - CA264_11445 0.52 +0.5 2,654,367 + CA264_11445 0.57 -0.2 2,654,371 + CA264_11445 0.57 -0.0 2,654,376 + CA264_11445 0.58 -0.9 2,654,448 + CA264_11445 0.64 -0.7 2,654,448 + CA264_11445 0.64 -1.9 2,654,453 + CA264_11445 0.64 -0.6 2,654,453 + CA264_11445 0.64 +0.1 2,654,454 - CA264_11445 0.65 -1.3 2,654,454 - CA264_11445 0.65 -0.6 2,654,454 - CA264_11445 0.65 -0.5 2,654,454 - CA264_11445 0.65 +0.9 2,654,536 + CA264_11445 0.72 +1.5 2,654,536 + CA264_11445 0.72 +0.9 2,654,536 + CA264_11445 0.72 -0.2 2,654,537 - CA264_11445 0.72 -0.1 2,654,556 + CA264_11445 0.74 +0.2 2,654,579 - CA264_11445 0.76 -0.4 2,654,646 + CA264_11445 0.82 +0.6 2,654,647 - CA264_11445 0.82 -1.1 2,654,647 - CA264_11445 0.82 -0.4 2,654,647 - CA264_11445 0.82 -0.3 2,654,649 + CA264_11445 0.82 +0.3 2,654,650 - CA264_11445 0.82 -0.5 2,654,799 + -0.1 2,654,799 + -0.3 2,654,800 - -0.5 2,654,800 - -1.1 2,654,864 + +0.4 2,654,865 - +0.6 2,654,946 + +0.2 2,654,957 - -0.7 2,654,973 - -0.9 2,654,973 - -2.4 2,654,984 - -1.1 2,655,014 + -0.0 2,655,014 + +0.5 2,655,015 - +1.2 2,655,202 - CA264_11450 0.23 +0.5 2,655,202 - CA264_11450 0.23 -0.8 2,655,329 + CA264_11450 0.35 +1.0 2,655,352 + CA264_11450 0.37 +0.2 2,655,361 + CA264_11450 0.37 -0.1 2,655,362 - CA264_11450 0.38 -1.5 2,655,396 - CA264_11450 0.41 -1.1 2,655,398 - CA264_11450 0.41 -0.2 2,655,398 - CA264_11450 0.41 -0.7 2,655,402 - CA264_11450 0.41 +0.4 2,655,402 - CA264_11450 0.41 -0.3 2,655,402 - CA264_11450 0.41 -0.2 2,655,433 - CA264_11450 0.44 -1.6 2,655,483 - CA264_11450 0.49 -0.5 2,655,536 - CA264_11450 0.54 -2.0 2,655,598 + CA264_11450 0.59 -0.1 2,655,626 + CA264_11450 0.62 +0.3 2,655,626 + CA264_11450 0.62 -0.2 2,655,650 - CA264_11450 0.64 -0.0 2,655,650 - CA264_11450 0.64 -0.0 2,655,827 + CA264_11450 0.81 +0.2 2,655,865 - CA264_11450 0.84 -0.7 2,655,867 + CA264_11450 0.84 -0.3 2,655,868 - CA264_11450 0.84 -0.9 2,655,891 + CA264_11450 0.86 +0.2 2,655,891 + CA264_11450 0.86 +0.1 2,655,891 + CA264_11450 0.86 +0.3 2,655,895 + CA264_11450 0.87 +1.6 2,655,896 - CA264_11450 0.87 -0.2 2,655,903 + CA264_11450 0.88 +0.2 2,655,903 + CA264_11450 0.88 -1.0 2,655,903 + CA264_11450 0.88 -1.3 2,655,903 + CA264_11450 0.88 -1.8 2,655,929 - +0.9 2,656,044 - -0.8 2,656,071 + -1.0 2,656,072 - -0.4 2,656,072 - +0.2 2,656,074 - -0.6 2,656,074 - -0.1 2,656,074 - +0.2 2,656,079 + +0.4 2,656,079 + +0.4 2,656,080 - -0.7 2,656,083 + -0.2 2,656,084 - +0.3 2,656,084 - -0.5 2,656,084 - -0.7 2,656,087 - -0.2 2,656,104 - -0.3 2,656,150 - -0.8 2,656,195 + +0.5 2,656,260 + CA264_11455 0.11 +0.2 2,656,260 + CA264_11455 0.11 +0.7 2,656,321 - CA264_11455 0.14 +1.0 2,656,495 - CA264_11455 0.24 -1.4 2,656,516 + CA264_11455 0.26 +1.1 2,656,517 - CA264_11455 0.26 -1.0 2,656,557 - CA264_11455 0.28 +0.5 2,656,557 - CA264_11455 0.28 -2.0 2,656,572 + CA264_11455 0.29 -0.6 2,656,580 + CA264_11455 0.29 +0.1 2,656,580 + CA264_11455 0.29 +0.1 2,656,677 + CA264_11455 0.35 +0.3 2,656,678 - CA264_11455 0.35 -0.5 2,656,686 + CA264_11455 0.36 +0.5 2,656,686 + CA264_11455 0.36 +1.0 2,656,687 - CA264_11455 0.36 -0.5 2,656,690 + CA264_11455 0.36 -0.7 2,656,690 + CA264_11455 0.36 -1.8 2,656,690 + CA264_11455 0.36 -1.5 2,656,694 + CA264_11455 0.36 +0.6 2,656,694 + CA264_11455 0.36 -1.1 2,656,695 - CA264_11455 0.36 +0.7 2,656,695 - CA264_11455 0.36 +0.7 2,656,758 + CA264_11455 0.40 +0.3 2,656,759 - CA264_11455 0.40 -0.9 2,656,766 - CA264_11455 0.40 -0.6 2,656,772 - CA264_11455 0.41 +0.7 2,656,773 + CA264_11455 0.41 -0.3 2,656,773 + CA264_11455 0.41 -0.3 2,656,774 - CA264_11455 0.41 -1.8 2,656,774 - CA264_11455 0.41 +0.3 2,656,878 - CA264_11455 0.47 -1.5 2,656,903 - CA264_11455 0.48 -1.0
Or see this region's nucleotide sequence