Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11440 and CA264_11445 are separated by 528 nucleotides CA264_11445 and CA264_11450 are separated by 100 nucleotides
CA264_11440: CA264_11440 - hypothetical protein, at 2,651,414 to 2,653,195
_11440
CA264_11445: CA264_11445 - hypothetical protein, at 2,653,724 to 2,654,854
_11445
CA264_11450: CA264_11450 - serine/threonine protein phosphatase, at 2,654,955 to 2,656,037
_11450
Position (kb)
2653
2654
2655 Strain fitness (log2 ratio)
-2
-1
0
1 at 2652.763 kb on + strand, within CA264_11440 at 2652.764 kb on - strand, within CA264_11440 at 2652.764 kb on - strand, within CA264_11440 at 2652.792 kb on + strand, within CA264_11440 at 2652.792 kb on + strand, within CA264_11440 at 2652.793 kb on - strand, within CA264_11440 at 2652.793 kb on - strand, within CA264_11440 at 2652.811 kb on + strand, within CA264_11440 at 2652.938 kb on + strand, within CA264_11440 at 2652.954 kb on - strand, within CA264_11440 at 2652.954 kb on - strand, within CA264_11440 at 2652.971 kb on + strand, within CA264_11440 at 2652.972 kb on - strand, within CA264_11440 at 2652.972 kb on - strand, within CA264_11440 at 2652.972 kb on - strand, within CA264_11440 at 2652.973 kb on + strand, within CA264_11440 at 2652.973 kb on + strand, within CA264_11440 at 2652.973 kb on + strand, within CA264_11440 at 2652.977 kb on + strand, within CA264_11440 at 2652.977 kb on + strand, within CA264_11440 at 2652.977 kb on + strand, within CA264_11440 at 2652.978 kb on - strand, within CA264_11440 at 2652.978 kb on - strand, within CA264_11440 at 2652.978 kb on - strand, within CA264_11440 at 2652.978 kb on - strand, within CA264_11440 at 2652.978 kb on - strand, within CA264_11440 at 2652.983 kb on + strand, within CA264_11440 at 2653.028 kb on - strand at 2653.132 kb on + strand at 2653.132 kb on + strand at 2653.133 kb on - strand at 2653.162 kb on - strand at 2653.258 kb on - strand at 2653.322 kb on - strand at 2653.546 kb on + strand at 2653.546 kb on + strand at 2653.547 kb on - strand at 2653.569 kb on + strand at 2653.570 kb on - strand at 2653.599 kb on + strand at 2653.633 kb on + strand at 2653.633 kb on + strand at 2653.633 kb on + strand at 2653.633 kb on + strand at 2653.633 kb on + strand at 2653.700 kb on + strand at 2653.700 kb on + strand at 2653.701 kb on - strand at 2653.701 kb on - strand at 2653.701 kb on - strand at 2653.731 kb on + strand at 2653.775 kb on - strand at 2653.775 kb on - strand at 2653.908 kb on + strand, within CA264_11445 at 2653.920 kb on + strand, within CA264_11445 at 2653.975 kb on + strand, within CA264_11445 at 2654.005 kb on + strand, within CA264_11445 at 2654.005 kb on + strand, within CA264_11445 at 2654.018 kb on - strand, within CA264_11445 at 2654.025 kb on + strand, within CA264_11445 at 2654.025 kb on + strand, within CA264_11445 at 2654.026 kb on - strand, within CA264_11445 at 2654.026 kb on - strand, within CA264_11445 at 2654.122 kb on + strand, within CA264_11445 at 2654.123 kb on - strand, within CA264_11445 at 2654.135 kb on + strand, within CA264_11445 at 2654.136 kb on - strand, within CA264_11445 at 2654.140 kb on + strand, within CA264_11445 at 2654.212 kb on + strand, within CA264_11445 at 2654.215 kb on - strand, within CA264_11445 at 2654.236 kb on + strand, within CA264_11445 at 2654.237 kb on - strand, within CA264_11445 at 2654.244 kb on - strand, within CA264_11445 at 2654.260 kb on - strand, within CA264_11445 at 2654.260 kb on - strand, within CA264_11445 at 2654.308 kb on + strand, within CA264_11445 at 2654.309 kb on - strand, within CA264_11445 at 2654.367 kb on + strand, within CA264_11445 at 2654.371 kb on + strand, within CA264_11445 at 2654.376 kb on + strand, within CA264_11445 at 2654.448 kb on + strand, within CA264_11445 at 2654.448 kb on + strand, within CA264_11445 at 2654.453 kb on + strand, within CA264_11445 at 2654.453 kb on + strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.454 kb on - strand, within CA264_11445 at 2654.536 kb on + strand, within CA264_11445 at 2654.536 kb on + strand, within CA264_11445 at 2654.536 kb on + strand, within CA264_11445 at 2654.537 kb on - strand, within CA264_11445 at 2654.556 kb on + strand, within CA264_11445 at 2654.579 kb on - strand, within CA264_11445 at 2654.646 kb on + strand, within CA264_11445 at 2654.647 kb on - strand, within CA264_11445 at 2654.647 kb on - strand, within CA264_11445 at 2654.647 kb on - strand, within CA264_11445 at 2654.649 kb on + strand, within CA264_11445 at 2654.650 kb on - strand, within CA264_11445 at 2654.799 kb on + strand at 2654.799 kb on + strand at 2654.800 kb on - strand at 2654.800 kb on - strand at 2654.864 kb on + strand at 2654.865 kb on - strand at 2654.946 kb on + strand at 2654.957 kb on - strand at 2654.973 kb on - strand at 2654.973 kb on - strand at 2654.984 kb on - strand at 2655.014 kb on + strand at 2655.014 kb on + strand at 2655.015 kb on - strand at 2655.202 kb on - strand, within CA264_11450 at 2655.202 kb on - strand, within CA264_11450 at 2655.329 kb on + strand, within CA264_11450 at 2655.352 kb on + strand, within CA264_11450 at 2655.361 kb on + strand, within CA264_11450 at 2655.362 kb on - strand, within CA264_11450 at 2655.396 kb on - strand, within CA264_11450 at 2655.398 kb on - strand, within CA264_11450 at 2655.398 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.402 kb on - strand, within CA264_11450 at 2655.433 kb on - strand, within CA264_11450 at 2655.483 kb on - strand, within CA264_11450 at 2655.536 kb on - strand, within CA264_11450 at 2655.598 kb on + strand, within CA264_11450 at 2655.626 kb on + strand, within CA264_11450 at 2655.626 kb on + strand, within CA264_11450 at 2655.650 kb on - strand, within CA264_11450 at 2655.650 kb on - strand, within CA264_11450 at 2655.827 kb on + strand, within CA264_11450
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,652,763 + CA264_11440 0.76 -0.3 2,652,764 - CA264_11440 0.76 -0.2 2,652,764 - CA264_11440 0.76 +0.3 2,652,792 + CA264_11440 0.77 -0.1 2,652,792 + CA264_11440 0.77 -0.0 2,652,793 - CA264_11440 0.77 +0.4 2,652,793 - CA264_11440 0.77 -0.2 2,652,811 + CA264_11440 0.78 -0.4 2,652,938 + CA264_11440 0.86 +0.4 2,652,954 - CA264_11440 0.86 +0.7 2,652,954 - CA264_11440 0.86 -0.3 2,652,971 + CA264_11440 0.87 -0.3 2,652,972 - CA264_11440 0.87 -1.1 2,652,972 - CA264_11440 0.87 +0.1 2,652,972 - CA264_11440 0.87 -0.0 2,652,973 + CA264_11440 0.87 +0.4 2,652,973 + CA264_11440 0.87 +0.9 2,652,973 + CA264_11440 0.87 +0.1 2,652,977 + CA264_11440 0.88 +0.1 2,652,977 + CA264_11440 0.88 -0.4 2,652,977 + CA264_11440 0.88 -0.8 2,652,978 - CA264_11440 0.88 -1.4 2,652,978 - CA264_11440 0.88 +1.3 2,652,978 - CA264_11440 0.88 -0.9 2,652,978 - CA264_11440 0.88 +0.4 2,652,978 - CA264_11440 0.88 -0.4 2,652,983 + CA264_11440 0.88 +0.9 2,653,028 - -1.2 2,653,132 + -1.6 2,653,132 + -0.6 2,653,133 - -0.4 2,653,162 - -0.5 2,653,258 - +0.3 2,653,322 - +0.1 2,653,546 + -0.3 2,653,546 + +0.1 2,653,547 - -1.1 2,653,569 + +0.4 2,653,570 - -0.5 2,653,599 + -0.3 2,653,633 + -0.3 2,653,633 + +0.1 2,653,633 + +0.5 2,653,633 + +1.2 2,653,633 + +0.6 2,653,700 + +0.0 2,653,700 + +0.4 2,653,701 - -0.6 2,653,701 - -1.4 2,653,701 - -0.4 2,653,731 + +0.6 2,653,775 - -0.2 2,653,775 - -2.0 2,653,908 + CA264_11445 0.16 -0.2 2,653,920 + CA264_11445 0.17 +0.0 2,653,975 + CA264_11445 0.22 -0.1 2,654,005 + CA264_11445 0.25 +1.0 2,654,005 + CA264_11445 0.25 -0.9 2,654,018 - CA264_11445 0.26 +1.2 2,654,025 + CA264_11445 0.27 +0.7 2,654,025 + CA264_11445 0.27 -0.8 2,654,026 - CA264_11445 0.27 -1.2 2,654,026 - CA264_11445 0.27 -0.7 2,654,122 + CA264_11445 0.35 +0.3 2,654,123 - CA264_11445 0.35 -1.0 2,654,135 + CA264_11445 0.36 +0.2 2,654,136 - CA264_11445 0.36 -1.1 2,654,140 + CA264_11445 0.37 +0.3 2,654,212 + CA264_11445 0.43 +0.5 2,654,215 - CA264_11445 0.43 -0.1 2,654,236 + CA264_11445 0.45 -0.4 2,654,237 - CA264_11445 0.45 -0.5 2,654,244 - CA264_11445 0.46 -1.0 2,654,260 - CA264_11445 0.47 -0.0 2,654,260 - CA264_11445 0.47 -0.5 2,654,308 + CA264_11445 0.52 +0.6 2,654,309 - CA264_11445 0.52 +0.5 2,654,367 + CA264_11445 0.57 -0.2 2,654,371 + CA264_11445 0.57 -0.0 2,654,376 + CA264_11445 0.58 -0.9 2,654,448 + CA264_11445 0.64 -0.7 2,654,448 + CA264_11445 0.64 -1.9 2,654,453 + CA264_11445 0.64 -0.6 2,654,453 + CA264_11445 0.64 +0.1 2,654,454 - CA264_11445 0.65 -1.3 2,654,454 - CA264_11445 0.65 -0.6 2,654,454 - CA264_11445 0.65 -0.5 2,654,454 - CA264_11445 0.65 +0.9 2,654,536 + CA264_11445 0.72 +1.5 2,654,536 + CA264_11445 0.72 +0.9 2,654,536 + CA264_11445 0.72 -0.2 2,654,537 - CA264_11445 0.72 -0.1 2,654,556 + CA264_11445 0.74 +0.2 2,654,579 - CA264_11445 0.76 -0.4 2,654,646 + CA264_11445 0.82 +0.6 2,654,647 - CA264_11445 0.82 -1.1 2,654,647 - CA264_11445 0.82 -0.4 2,654,647 - CA264_11445 0.82 -0.3 2,654,649 + CA264_11445 0.82 +0.3 2,654,650 - CA264_11445 0.82 -0.5 2,654,799 + -0.1 2,654,799 + -0.3 2,654,800 - -0.5 2,654,800 - -1.1 2,654,864 + +0.4 2,654,865 - +0.6 2,654,946 + +0.2 2,654,957 - -0.7 2,654,973 - -0.9 2,654,973 - -2.4 2,654,984 - -1.1 2,655,014 + -0.0 2,655,014 + +0.5 2,655,015 - +1.2 2,655,202 - CA264_11450 0.23 +0.5 2,655,202 - CA264_11450 0.23 -0.8 2,655,329 + CA264_11450 0.35 +1.0 2,655,352 + CA264_11450 0.37 +0.2 2,655,361 + CA264_11450 0.37 -0.1 2,655,362 - CA264_11450 0.38 -1.5 2,655,396 - CA264_11450 0.41 -1.1 2,655,398 - CA264_11450 0.41 -0.2 2,655,398 - CA264_11450 0.41 -0.7 2,655,402 - CA264_11450 0.41 +0.4 2,655,402 - CA264_11450 0.41 -0.3 2,655,402 - CA264_11450 0.41 -0.2 2,655,433 - CA264_11450 0.44 -1.6 2,655,483 - CA264_11450 0.49 -0.5 2,655,536 - CA264_11450 0.54 -2.0 2,655,598 + CA264_11450 0.59 -0.1 2,655,626 + CA264_11450 0.62 +0.3 2,655,626 + CA264_11450 0.62 -0.2 2,655,650 - CA264_11450 0.64 -0.0 2,655,650 - CA264_11450 0.64 -0.0 2,655,827 + CA264_11450 0.81 +0.2
Or see this region's nucleotide sequence