Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11245 and CA264_11250 are separated by 39 nucleotides CA264_11250 and CA264_11255 are separated by 204 nucleotides CA264_11255 and CA264_11260 are separated by 389 nucleotides
CA264_11245: CA264_11245 - hypothetical protein, at 2,603,797 to 2,604,012
_11245
CA264_11250: CA264_11250 - hypothetical protein, at 2,604,052 to 2,604,663
_11250
CA264_11255: CA264_11255 - peptidase M13, at 2,604,868 to 2,606,928
_11255
CA264_11260: CA264_11260 - DNA gyrase subunit B, at 2,607,318 to 2,609,276
_11260
Position (kb)
2604
2605
2606
2607 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2603.959 kb on + strand, within CA264_11245 at 2603.961 kb on + strand, within CA264_11245 at 2603.965 kb on - strand, within CA264_11245 at 2603.982 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.990 kb on - strand, within CA264_11245 at 2603.992 kb on + strand at 2603.992 kb on + strand at 2603.992 kb on + strand at 2604.012 kb on + strand at 2604.072 kb on + strand at 2604.072 kb on + strand at 2604.078 kb on + strand at 2604.079 kb on - strand at 2604.173 kb on - strand, within CA264_11250 at 2604.197 kb on + strand, within CA264_11250 at 2604.197 kb on + strand, within CA264_11250 at 2604.201 kb on + strand, within CA264_11250 at 2604.202 kb on - strand, within CA264_11250 at 2604.202 kb on - strand, within CA264_11250 at 2604.212 kb on + strand, within CA264_11250 at 2604.212 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.222 kb on + strand, within CA264_11250 at 2604.222 kb on + strand, within CA264_11250 at 2604.223 kb on - strand, within CA264_11250 at 2604.383 kb on - strand, within CA264_11250 at 2604.385 kb on - strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.390 kb on + strand, within CA264_11250 at 2604.426 kb on + strand, within CA264_11250 at 2604.426 kb on + strand, within CA264_11250 at 2604.466 kb on - strand, within CA264_11250 at 2604.507 kb on - strand, within CA264_11250 at 2604.540 kb on + strand, within CA264_11250 at 2604.540 kb on + strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.542 kb on + strand, within CA264_11250 at 2604.543 kb on - strand, within CA264_11250 at 2604.553 kb on + strand, within CA264_11250 at 2604.557 kb on + strand, within CA264_11250 at 2604.558 kb on - strand, within CA264_11250 at 2604.558 kb on - strand, within CA264_11250 at 2604.610 kb on + strand at 2604.697 kb on + strand at 2604.839 kb on + strand at 2604.854 kb on + strand at 2604.854 kb on + strand at 2604.909 kb on + strand at 2604.910 kb on - strand at 2604.951 kb on + strand at 2604.951 kb on + strand at 2605.107 kb on + strand, within CA264_11255 at 2605.142 kb on + strand, within CA264_11255 at 2605.152 kb on + strand, within CA264_11255 at 2605.152 kb on + strand, within CA264_11255 at 2605.153 kb on - strand, within CA264_11255 at 2605.163 kb on - strand, within CA264_11255 at 2605.189 kb on - strand, within CA264_11255 at 2605.226 kb on + strand, within CA264_11255 at 2605.236 kb on - strand, within CA264_11255 at 2605.475 kb on + strand, within CA264_11255 at 2605.475 kb on + strand, within CA264_11255 at 2605.479 kb on - strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.554 kb on + strand, within CA264_11255 at 2605.555 kb on - strand, within CA264_11255 at 2605.555 kb on - strand, within CA264_11255 at 2605.557 kb on - strand, within CA264_11255 at 2605.808 kb on + strand, within CA264_11255 at 2605.858 kb on - strand, within CA264_11255 at 2605.858 kb on - strand, within CA264_11255 at 2606.040 kb on + strand, within CA264_11255 at 2606.148 kb on + strand, within CA264_11255 at 2606.148 kb on + strand, within CA264_11255 at 2606.153 kb on + strand, within CA264_11255 at 2606.154 kb on - strand, within CA264_11255 at 2606.179 kb on + strand, within CA264_11255 at 2606.180 kb on - strand, within CA264_11255 at 2606.291 kb on + strand, within CA264_11255 at 2606.291 kb on + strand, within CA264_11255 at 2606.291 kb on + strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.301 kb on - strand, within CA264_11255 at 2606.343 kb on - strand, within CA264_11255 at 2606.343 kb on - strand, within CA264_11255 at 2606.346 kb on - strand, within CA264_11255 at 2606.397 kb on + strand, within CA264_11255 at 2606.398 kb on - strand, within CA264_11255 at 2606.401 kb on + strand, within CA264_11255 at 2606.401 kb on + strand, within CA264_11255 at 2606.402 kb on - strand, within CA264_11255 at 2606.427 kb on - strand, within CA264_11255 at 2606.427 kb on - strand, within CA264_11255 at 2606.468 kb on + strand, within CA264_11255 at 2606.543 kb on + strand, within CA264_11255 at 2606.553 kb on + strand, within CA264_11255 at 2606.585 kb on + strand, within CA264_11255 at 2606.585 kb on + strand, within CA264_11255 at 2606.585 kb on + strand, within CA264_11255 at 2606.586 kb on - strand, within CA264_11255 at 2606.586 kb on - strand, within CA264_11255 at 2606.596 kb on + strand, within CA264_11255 at 2606.596 kb on + strand, within CA264_11255 at 2606.676 kb on + strand, within CA264_11255 at 2606.765 kb on + strand at 2606.808 kb on + strand at 2606.857 kb on + strand at 2606.857 kb on + strand at 2606.858 kb on - strand at 2606.887 kb on + strand at 2606.941 kb on + strand at 2606.942 kb on - strand at 2606.946 kb on - strand at 2606.951 kb on + strand at 2607.003 kb on - strand at 2607.008 kb on - strand at 2607.008 kb on - strand at 2607.047 kb on + strand at 2607.047 kb on + strand at 2607.048 kb on - strand at 2607.066 kb on + strand at 2607.066 kb on + strand at 2607.067 kb on - strand at 2607.067 kb on - strand at 2607.068 kb on + strand at 2607.068 kb on + strand at 2607.068 kb on + strand at 2607.083 kb on - strand at 2607.134 kb on + strand at 2607.198 kb on + strand at 2607.199 kb on - strand at 2607.246 kb on - strand at 2607.272 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,603,959 + CA264_11245 0.75 -0.3 2,603,961 + CA264_11245 0.76 -1.3 2,603,965 - CA264_11245 0.78 +0.2 2,603,982 + CA264_11245 0.86 +0.4 2,603,989 + CA264_11245 0.89 -0.1 2,603,989 + CA264_11245 0.89 +0.4 2,603,989 + CA264_11245 0.89 -1.2 2,603,990 - CA264_11245 0.89 -2.8 2,603,992 + +0.3 2,603,992 + -0.2 2,603,992 + -0.8 2,604,012 + -1.2 2,604,072 + +0.9 2,604,072 + +0.2 2,604,078 + +0.8 2,604,079 - -0.5 2,604,173 - CA264_11250 0.20 -0.0 2,604,197 + CA264_11250 0.24 -0.0 2,604,197 + CA264_11250 0.24 -0.7 2,604,201 + CA264_11250 0.24 -0.4 2,604,202 - CA264_11250 0.25 +0.5 2,604,202 - CA264_11250 0.25 -0.4 2,604,212 + CA264_11250 0.26 -0.3 2,604,212 - CA264_11250 0.26 +1.9 2,604,213 - CA264_11250 0.26 +0.1 2,604,213 - CA264_11250 0.26 +0.3 2,604,213 - CA264_11250 0.26 -0.2 2,604,216 + CA264_11250 0.27 -0.3 2,604,216 + CA264_11250 0.27 +0.4 2,604,216 + CA264_11250 0.27 -1.0 2,604,216 + CA264_11250 0.27 -0.2 2,604,216 + CA264_11250 0.27 +0.3 2,604,216 + CA264_11250 0.27 +0.3 2,604,216 + CA264_11250 0.27 -1.3 2,604,217 - CA264_11250 0.27 +0.1 2,604,217 - CA264_11250 0.27 +0.4 2,604,217 - CA264_11250 0.27 -0.1 2,604,217 - CA264_11250 0.27 +0.2 2,604,218 + CA264_11250 0.27 -0.5 2,604,218 + CA264_11250 0.27 -0.1 2,604,218 + CA264_11250 0.27 -2.3 2,604,218 + CA264_11250 0.27 -1.4 2,604,218 + CA264_11250 0.27 -0.4 2,604,219 - CA264_11250 0.27 +1.1 2,604,219 - CA264_11250 0.27 -0.5 2,604,219 - CA264_11250 0.27 -0.6 2,604,219 - CA264_11250 0.27 -0.5 2,604,222 + CA264_11250 0.28 +0.8 2,604,222 + CA264_11250 0.28 +1.3 2,604,223 - CA264_11250 0.28 +1.0 2,604,383 - CA264_11250 0.54 -0.3 2,604,385 - CA264_11250 0.54 -0.4 2,604,388 + CA264_11250 0.55 -1.5 2,604,388 + CA264_11250 0.55 +1.1 2,604,388 + CA264_11250 0.55 -0.6 2,604,388 + CA264_11250 0.55 -0.0 2,604,388 + CA264_11250 0.55 +0.0 2,604,388 + CA264_11250 0.55 +0.4 2,604,388 + CA264_11250 0.55 -0.5 2,604,389 - CA264_11250 0.55 -0.4 2,604,389 - CA264_11250 0.55 +1.1 2,604,389 - CA264_11250 0.55 -0.1 2,604,390 + CA264_11250 0.55 +0.2 2,604,426 + CA264_11250 0.61 +0.0 2,604,426 + CA264_11250 0.61 +1.4 2,604,466 - CA264_11250 0.68 -0.3 2,604,507 - CA264_11250 0.74 -0.1 2,604,540 + CA264_11250 0.80 +0.2 2,604,540 + CA264_11250 0.80 -1.7 2,604,541 - CA264_11250 0.80 -0.6 2,604,541 - CA264_11250 0.80 -0.2 2,604,541 - CA264_11250 0.80 +0.0 2,604,542 + CA264_11250 0.80 -0.8 2,604,543 - CA264_11250 0.80 -1.0 2,604,553 + CA264_11250 0.82 -0.3 2,604,557 + CA264_11250 0.83 +0.2 2,604,558 - CA264_11250 0.83 +0.1 2,604,558 - CA264_11250 0.83 -0.3 2,604,610 + -0.6 2,604,697 + -0.4 2,604,839 + -0.1 2,604,854 + -0.4 2,604,854 + +0.1 2,604,909 + -0.7 2,604,910 - -1.5 2,604,951 + +1.5 2,604,951 + +0.3 2,605,107 + CA264_11255 0.12 -0.0 2,605,142 + CA264_11255 0.13 +0.1 2,605,152 + CA264_11255 0.14 +1.1 2,605,152 + CA264_11255 0.14 -0.2 2,605,153 - CA264_11255 0.14 -0.4 2,605,163 - CA264_11255 0.14 -0.6 2,605,189 - CA264_11255 0.16 +0.1 2,605,226 + CA264_11255 0.17 +0.1 2,605,236 - CA264_11255 0.18 -0.1 2,605,475 + CA264_11255 0.29 +0.6 2,605,475 + CA264_11255 0.29 -1.7 2,605,479 - CA264_11255 0.30 -0.1 2,605,543 + CA264_11255 0.33 +0.1 2,605,543 + CA264_11255 0.33 +0.3 2,605,543 + CA264_11255 0.33 +0.4 2,605,554 + CA264_11255 0.33 -0.2 2,605,555 - CA264_11255 0.33 +0.9 2,605,555 - CA264_11255 0.33 +0.2 2,605,557 - CA264_11255 0.33 -0.1 2,605,808 + CA264_11255 0.46 +0.6 2,605,858 - CA264_11255 0.48 -0.5 2,605,858 - CA264_11255 0.48 -0.5 2,606,040 + CA264_11255 0.57 +0.3 2,606,148 + CA264_11255 0.62 +0.5 2,606,148 + CA264_11255 0.62 +0.2 2,606,153 + CA264_11255 0.62 +0.4 2,606,154 - CA264_11255 0.62 -0.3 2,606,179 + CA264_11255 0.64 +0.0 2,606,180 - CA264_11255 0.64 +1.1 2,606,291 + CA264_11255 0.69 -0.2 2,606,291 + CA264_11255 0.69 +0.2 2,606,291 + CA264_11255 0.69 +0.1 2,606,292 - CA264_11255 0.69 +0.4 2,606,292 - CA264_11255 0.69 -1.0 2,606,292 - CA264_11255 0.69 +0.7 2,606,292 - CA264_11255 0.69 +0.8 2,606,301 - CA264_11255 0.70 -1.3 2,606,343 - CA264_11255 0.72 +0.9 2,606,343 - CA264_11255 0.72 +0.4 2,606,346 - CA264_11255 0.72 -0.9 2,606,397 + CA264_11255 0.74 -1.0 2,606,398 - CA264_11255 0.74 +0.2 2,606,401 + CA264_11255 0.74 +0.3 2,606,401 + CA264_11255 0.74 +0.2 2,606,402 - CA264_11255 0.74 -0.7 2,606,427 - CA264_11255 0.76 -0.8 2,606,427 - CA264_11255 0.76 +1.7 2,606,468 + CA264_11255 0.78 +0.4 2,606,543 + CA264_11255 0.81 -0.3 2,606,553 + CA264_11255 0.82 +0.8 2,606,585 + CA264_11255 0.83 +0.2 2,606,585 + CA264_11255 0.83 +0.2 2,606,585 + CA264_11255 0.83 -0.2 2,606,586 - CA264_11255 0.83 -0.2 2,606,586 - CA264_11255 0.83 -0.8 2,606,596 + CA264_11255 0.84 +0.5 2,606,596 + CA264_11255 0.84 -0.8 2,606,676 + CA264_11255 0.88 -0.5 2,606,765 + +0.0 2,606,808 + +1.2 2,606,857 + -1.0 2,606,857 + +0.2 2,606,858 - -0.0 2,606,887 + -0.1 2,606,941 + -0.6 2,606,942 - +0.2 2,606,946 - +0.7 2,606,951 + +0.0 2,607,003 - -0.5 2,607,008 - +0.5 2,607,008 - -1.5 2,607,047 + -0.1 2,607,047 + -0.4 2,607,048 - -1.5 2,607,066 + -0.6 2,607,066 + -0.7 2,607,067 - -2.0 2,607,067 - -1.9 2,607,068 + -1.2 2,607,068 + -0.4 2,607,068 + -0.6 2,607,083 - +1.4 2,607,134 + -0.4 2,607,198 + -1.7 2,607,199 - -1.0 2,607,246 - +0.4 2,607,272 - -0.1
Or see this region's nucleotide sequence