Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10340 and CA264_10345 overlap by 32 nucleotides CA264_10345 and CA264_10350 are separated by 193 nucleotides
CA264_10340: CA264_10340 - recombinase family protein, at 2,404,150 to 2,405,688
_10340
CA264_10345: CA264_10345 - tRNA-Arg, at 2,405,657 to 2,405,733
_10345
CA264_10350: CA264_10350 - hypothetical protein, at 2,405,927 to 2,407,333
_10350
Position (kb)
2405
2406 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2404.660 kb on - strand, within CA264_10340 at 2404.663 kb on + strand, within CA264_10340 at 2404.776 kb on + strand, within CA264_10340 at 2404.845 kb on + strand, within CA264_10340 at 2404.849 kb on + strand, within CA264_10340 at 2404.849 kb on + strand, within CA264_10340 at 2404.851 kb on + strand, within CA264_10340 at 2404.851 kb on + strand, within CA264_10340 at 2404.851 kb on + strand, within CA264_10340 at 2404.875 kb on - strand, within CA264_10340 at 2405.000 kb on - strand, within CA264_10340 at 2405.063 kb on - strand, within CA264_10340 at 2405.066 kb on - strand, within CA264_10340 at 2405.071 kb on + strand, within CA264_10340 at 2405.074 kb on + strand, within CA264_10340 at 2405.075 kb on - strand, within CA264_10340 at 2405.075 kb on - strand, within CA264_10340 at 2405.153 kb on - strand, within CA264_10340 at 2405.153 kb on - strand, within CA264_10340 at 2405.153 kb on - strand, within CA264_10340 at 2405.153 kb on - strand, within CA264_10340 at 2405.182 kb on + strand, within CA264_10340 at 2405.182 kb on + strand, within CA264_10340 at 2405.183 kb on - strand, within CA264_10340 at 2405.183 kb on - strand, within CA264_10340 at 2405.220 kb on + strand, within CA264_10340 at 2405.607 kb on - strand at 2405.757 kb on + strand at 2405.758 kb on - strand at 2405.807 kb on + strand at 2405.835 kb on - strand at 2405.849 kb on + strand at 2405.850 kb on - strand at 2405.851 kb on + strand at 2405.854 kb on + strand at 2405.855 kb on - strand at 2405.855 kb on - strand at 2405.924 kb on + strand at 2405.924 kb on + strand at 2405.925 kb on - strand at 2405.926 kb on + strand at 2405.927 kb on - strand at 2405.991 kb on - strand at 2405.991 kb on - strand at 2406.000 kb on - strand at 2406.039 kb on + strand at 2406.040 kb on - strand at 2406.042 kb on + strand at 2406.043 kb on - strand at 2406.045 kb on + strand at 2406.058 kb on - strand at 2406.058 kb on - strand at 2406.064 kb on + strand at 2406.065 kb on - strand at 2406.067 kb on + strand at 2406.067 kb on + strand at 2406.068 kb on - strand, within CA264_10350 at 2406.121 kb on + strand, within CA264_10350 at 2406.139 kb on + strand, within CA264_10350 at 2406.190 kb on + strand, within CA264_10350 at 2406.214 kb on - strand, within CA264_10350 at 2406.227 kb on - strand, within CA264_10350 at 2406.227 kb on - strand, within CA264_10350 at 2406.255 kb on + strand, within CA264_10350 at 2406.259 kb on + strand, within CA264_10350 at 2406.259 kb on + strand, within CA264_10350 at 2406.260 kb on - strand, within CA264_10350 at 2406.260 kb on - strand, within CA264_10350 at 2406.313 kb on + strand, within CA264_10350 at 2406.327 kb on + strand, within CA264_10350 at 2406.359 kb on + strand, within CA264_10350 at 2406.360 kb on - strand, within CA264_10350 at 2406.360 kb on - strand, within CA264_10350 at 2406.414 kb on + strand, within CA264_10350 at 2406.418 kb on - strand, within CA264_10350 at 2406.426 kb on - strand, within CA264_10350 at 2406.430 kb on + strand, within CA264_10350 at 2406.431 kb on - strand, within CA264_10350 at 2406.431 kb on - strand, within CA264_10350 at 2406.431 kb on - strand, within CA264_10350 at 2406.464 kb on - strand, within CA264_10350 at 2406.517 kb on + strand, within CA264_10350 at 2406.518 kb on - strand, within CA264_10350 at 2406.573 kb on - strand, within CA264_10350 at 2406.576 kb on + strand, within CA264_10350 at 2406.577 kb on - strand, within CA264_10350 at 2406.577 kb on - strand, within CA264_10350 at 2406.581 kb on + strand, within CA264_10350 at 2406.596 kb on - strand, within CA264_10350 at 2406.599 kb on + strand, within CA264_10350 at 2406.600 kb on - strand, within CA264_10350 at 2406.603 kb on - strand, within CA264_10350 at 2406.676 kb on - strand, within CA264_10350 at 2406.692 kb on + strand, within CA264_10350
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,404,660 - CA264_10340 0.33 +0.1 2,404,663 + CA264_10340 0.33 +0.4 2,404,776 + CA264_10340 0.41 +0.0 2,404,845 + CA264_10340 0.45 +0.8 2,404,849 + CA264_10340 0.45 -0.3 2,404,849 + CA264_10340 0.45 +0.2 2,404,851 + CA264_10340 0.46 +0.4 2,404,851 + CA264_10340 0.46 +0.5 2,404,851 + CA264_10340 0.46 +0.8 2,404,875 - CA264_10340 0.47 +0.7 2,405,000 - CA264_10340 0.55 +0.6 2,405,063 - CA264_10340 0.59 -0.4 2,405,066 - CA264_10340 0.60 +0.6 2,405,071 + CA264_10340 0.60 +0.7 2,405,074 + CA264_10340 0.60 +0.8 2,405,075 - CA264_10340 0.60 +0.0 2,405,075 - CA264_10340 0.60 +0.9 2,405,153 - CA264_10340 0.65 -0.1 2,405,153 - CA264_10340 0.65 -0.6 2,405,153 - CA264_10340 0.65 -0.6 2,405,153 - CA264_10340 0.65 +0.6 2,405,182 + CA264_10340 0.67 -0.3 2,405,182 + CA264_10340 0.67 -0.3 2,405,183 - CA264_10340 0.67 +0.5 2,405,183 - CA264_10340 0.67 +0.2 2,405,220 + CA264_10340 0.70 -0.6 2,405,607 - +1.2 2,405,757 + +0.7 2,405,758 - +0.3 2,405,807 + -0.4 2,405,835 - +0.6 2,405,849 + +0.3 2,405,850 - +0.2 2,405,851 + -0.5 2,405,854 + -1.4 2,405,855 - -0.7 2,405,855 - -1.1 2,405,924 + -0.9 2,405,924 + -0.9 2,405,925 - -0.3 2,405,926 + -0.1 2,405,927 - -1.3 2,405,991 - -0.6 2,405,991 - -0.8 2,406,000 - -0.6 2,406,039 + -0.8 2,406,040 - -0.3 2,406,042 + +0.6 2,406,043 - -0.5 2,406,045 + -0.2 2,406,058 - -0.5 2,406,058 - -0.6 2,406,064 + -1.1 2,406,065 - +0.2 2,406,067 + +0.3 2,406,067 + +1.4 2,406,068 - CA264_10350 0.10 -0.5 2,406,121 + CA264_10350 0.14 -0.9 2,406,139 + CA264_10350 0.15 -0.5 2,406,190 + CA264_10350 0.19 -0.4 2,406,214 - CA264_10350 0.20 -0.7 2,406,227 - CA264_10350 0.21 -0.7 2,406,227 - CA264_10350 0.21 -0.6 2,406,255 + CA264_10350 0.23 -1.0 2,406,259 + CA264_10350 0.24 -0.3 2,406,259 + CA264_10350 0.24 -0.1 2,406,260 - CA264_10350 0.24 -1.0 2,406,260 - CA264_10350 0.24 -0.6 2,406,313 + CA264_10350 0.27 +1.2 2,406,327 + CA264_10350 0.28 +1.8 2,406,359 + CA264_10350 0.31 +0.8 2,406,360 - CA264_10350 0.31 -0.4 2,406,360 - CA264_10350 0.31 -1.0 2,406,414 + CA264_10350 0.35 +0.4 2,406,418 - CA264_10350 0.35 -0.7 2,406,426 - CA264_10350 0.35 -0.4 2,406,430 + CA264_10350 0.36 -2.8 2,406,431 - CA264_10350 0.36 +0.7 2,406,431 - CA264_10350 0.36 +0.4 2,406,431 - CA264_10350 0.36 +0.5 2,406,464 - CA264_10350 0.38 -0.5 2,406,517 + CA264_10350 0.42 +0.8 2,406,518 - CA264_10350 0.42 +0.3 2,406,573 - CA264_10350 0.46 +0.6 2,406,576 + CA264_10350 0.46 +0.2 2,406,577 - CA264_10350 0.46 -0.7 2,406,577 - CA264_10350 0.46 +0.6 2,406,581 + CA264_10350 0.46 -0.2 2,406,596 - CA264_10350 0.48 +0.1 2,406,599 + CA264_10350 0.48 +0.2 2,406,600 - CA264_10350 0.48 -0.8 2,406,603 - CA264_10350 0.48 -1.1 2,406,676 - CA264_10350 0.53 -0.4 2,406,692 + CA264_10350 0.54 -0.6
Or see this region's nucleotide sequence