Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09840 and CA264_09845 are separated by 607 nucleotides CA264_09845 and CA264_09850 are separated by 14 nucleotides
CA264_09840: CA264_09840 - hypothetical protein, at 2,289,364 to 2,289,576
_09840
CA264_09845: CA264_09845 - LLM class flavin-dependent oxidoreductase, at 2,290,184 to 2,291,098
_09845
CA264_09850: CA264_09850 - hypothetical protein, at 2,291,113 to 2,292,294
_09850
Position (kb)
2290
2291
2292 Strain fitness (log2 ratio)
-2
-1
0
1 at 2289.247 kb on + strand at 2289.247 kb on + strand at 2289.251 kb on + strand at 2289.252 kb on - strand at 2289.272 kb on + strand at 2289.272 kb on + strand at 2289.273 kb on - strand at 2289.312 kb on - strand at 2289.332 kb on + strand at 2289.333 kb on - strand at 2289.338 kb on - strand at 2289.338 kb on - strand at 2289.347 kb on + strand at 2289.362 kb on - strand at 2289.689 kb on + strand at 2289.753 kb on + strand at 2289.753 kb on + strand at 2289.821 kb on - strand at 2289.821 kb on - strand at 2289.821 kb on - strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.849 kb on + strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.850 kb on - strand at 2289.852 kb on + strand at 2289.853 kb on - strand at 2289.941 kb on + strand at 2289.946 kb on + strand at 2289.946 kb on + strand at 2289.946 kb on + strand at 2289.947 kb on - strand at 2289.947 kb on - strand at 2289.947 kb on - strand at 2289.966 kb on + strand at 2289.993 kb on - strand at 2290.064 kb on + strand at 2290.065 kb on - strand at 2290.140 kb on - strand at 2290.143 kb on + strand at 2290.265 kb on + strand at 2290.266 kb on - strand at 2290.266 kb on - strand at 2290.314 kb on + strand, within CA264_09845 at 2290.315 kb on - strand, within CA264_09845 at 2290.315 kb on - strand, within CA264_09845 at 2290.344 kb on + strand, within CA264_09845 at 2290.345 kb on - strand, within CA264_09845 at 2290.345 kb on - strand, within CA264_09845 at 2290.397 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.553 kb on + strand, within CA264_09845 at 2290.554 kb on - strand, within CA264_09845 at 2290.554 kb on - strand, within CA264_09845 at 2290.557 kb on + strand, within CA264_09845 at 2290.557 kb on + strand, within CA264_09845 at 2290.558 kb on - strand, within CA264_09845 at 2290.607 kb on + strand, within CA264_09845 at 2290.608 kb on - strand, within CA264_09845 at 2290.714 kb on + strand, within CA264_09845 at 2290.751 kb on + strand, within CA264_09845 at 2290.787 kb on + strand, within CA264_09845 at 2290.807 kb on - strand, within CA264_09845 at 2290.826 kb on - strand, within CA264_09845 at 2290.863 kb on - strand, within CA264_09845 at 2290.889 kb on + strand, within CA264_09845 at 2290.890 kb on - strand, within CA264_09845 at 2290.890 kb on - strand, within CA264_09845 at 2290.960 kb on - strand, within CA264_09845 at 2290.997 kb on + strand, within CA264_09845 at 2291.081 kb on + strand at 2291.295 kb on - strand, within CA264_09850 at 2291.295 kb on - strand, within CA264_09850 at 2291.359 kb on + strand, within CA264_09850 at 2291.380 kb on + strand, within CA264_09850 at 2291.391 kb on + strand, within CA264_09850 at 2291.392 kb on - strand, within CA264_09850 at 2291.392 kb on - strand, within CA264_09850 at 2291.392 kb on - strand, within CA264_09850 at 2291.412 kb on + strand, within CA264_09850 at 2291.413 kb on - strand, within CA264_09850 at 2291.413 kb on - strand, within CA264_09850 at 2291.482 kb on - strand, within CA264_09850 at 2291.482 kb on - strand, within CA264_09850 at 2291.482 kb on - strand, within CA264_09850 at 2291.574 kb on + strand, within CA264_09850 at 2291.575 kb on - strand, within CA264_09850 at 2291.583 kb on - strand, within CA264_09850 at 2291.592 kb on - strand, within CA264_09850 at 2291.635 kb on + strand, within CA264_09850 at 2291.635 kb on + strand, within CA264_09850 at 2291.646 kb on - strand, within CA264_09850 at 2291.704 kb on + strand, within CA264_09850 at 2291.723 kb on + strand, within CA264_09850 at 2291.723 kb on + strand, within CA264_09850 at 2291.724 kb on - strand, within CA264_09850 at 2291.724 kb on - strand, within CA264_09850 at 2291.757 kb on + strand, within CA264_09850 at 2291.759 kb on + strand, within CA264_09850 at 2291.760 kb on - strand, within CA264_09850 at 2291.760 kb on - strand, within CA264_09850 at 2291.791 kb on - strand, within CA264_09850 at 2291.795 kb on - strand, within CA264_09850 at 2291.816 kb on - strand, within CA264_09850 at 2291.816 kb on - strand, within CA264_09850 at 2291.816 kb on - strand, within CA264_09850 at 2291.819 kb on + strand, within CA264_09850 at 2291.820 kb on - strand, within CA264_09850 at 2291.849 kb on + strand, within CA264_09850 at 2291.850 kb on - strand, within CA264_09850 at 2291.885 kb on + strand, within CA264_09850 at 2291.886 kb on - strand, within CA264_09850 at 2291.886 kb on - strand, within CA264_09850 at 2291.896 kb on + strand, within CA264_09850 at 2291.935 kb on + strand, within CA264_09850 at 2291.935 kb on + strand, within CA264_09850 at 2291.935 kb on + strand, within CA264_09850 at 2291.936 kb on - strand, within CA264_09850 at 2291.936 kb on - strand, within CA264_09850 at 2291.936 kb on - strand, within CA264_09850 at 2291.943 kb on + strand, within CA264_09850 at 2291.948 kb on - strand, within CA264_09850 at 2291.962 kb on + strand, within CA264_09850 at 2291.967 kb on + strand, within CA264_09850 at 2291.968 kb on - strand, within CA264_09850 at 2291.970 kb on + strand, within CA264_09850 at 2291.971 kb on - strand, within CA264_09850 at 2291.991 kb on - strand, within CA264_09850 at 2292.004 kb on + strand, within CA264_09850 at 2292.004 kb on + strand, within CA264_09850 at 2292.005 kb on - strand, within CA264_09850 at 2292.005 kb on - strand, within CA264_09850 at 2292.025 kb on + strand, within CA264_09850 at 2292.034 kb on + strand, within CA264_09850 at 2292.057 kb on + strand, within CA264_09850 at 2292.058 kb on - strand, within CA264_09850
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,289,247 + -1.1 2,289,247 + -0.5 2,289,251 + +0.7 2,289,252 - -1.3 2,289,272 + -0.5 2,289,272 + -0.1 2,289,273 - +1.5 2,289,312 - -0.7 2,289,332 + +0.0 2,289,333 - -0.2 2,289,338 - -1.3 2,289,338 - -0.2 2,289,347 + -0.8 2,289,362 - -0.6 2,289,689 + -2.7 2,289,753 + +0.5 2,289,753 + -0.3 2,289,821 - -0.3 2,289,821 - +0.0 2,289,821 - -0.3 2,289,849 + -1.6 2,289,849 + -1.6 2,289,849 + -1.2 2,289,849 + -0.4 2,289,849 + -0.4 2,289,850 - -1.3 2,289,850 - +0.2 2,289,850 - -1.0 2,289,850 - -0.2 2,289,850 - +0.4 2,289,852 + -0.1 2,289,853 - -1.3 2,289,941 + -1.9 2,289,946 + +0.4 2,289,946 + +0.4 2,289,946 + -1.0 2,289,947 - -0.2 2,289,947 - +0.1 2,289,947 - -0.1 2,289,966 + -1.0 2,289,993 - -0.0 2,290,064 + -0.8 2,290,065 - -1.2 2,290,140 - -0.6 2,290,143 + +0.7 2,290,265 + +0.0 2,290,266 - -0.5 2,290,266 - -0.5 2,290,314 + CA264_09845 0.14 +0.6 2,290,315 - CA264_09845 0.14 +0.2 2,290,315 - CA264_09845 0.14 -1.6 2,290,344 + CA264_09845 0.17 +0.4 2,290,345 - CA264_09845 0.18 -0.0 2,290,345 - CA264_09845 0.18 -0.8 2,290,397 + CA264_09845 0.23 +1.1 2,290,553 + CA264_09845 0.40 +0.8 2,290,553 + CA264_09845 0.40 -0.1 2,290,553 + CA264_09845 0.40 -0.1 2,290,553 + CA264_09845 0.40 -0.4 2,290,553 + CA264_09845 0.40 +0.2 2,290,554 - CA264_09845 0.40 -0.9 2,290,554 - CA264_09845 0.40 -0.2 2,290,557 + CA264_09845 0.41 +0.3 2,290,557 + CA264_09845 0.41 -0.0 2,290,558 - CA264_09845 0.41 -0.9 2,290,607 + CA264_09845 0.46 +0.4 2,290,608 - CA264_09845 0.46 -0.5 2,290,714 + CA264_09845 0.58 -0.1 2,290,751 + CA264_09845 0.62 +0.9 2,290,787 + CA264_09845 0.66 +0.2 2,290,807 - CA264_09845 0.68 -0.7 2,290,826 - CA264_09845 0.70 -0.2 2,290,863 - CA264_09845 0.74 +1.0 2,290,889 + CA264_09845 0.77 -0.3 2,290,890 - CA264_09845 0.77 -1.0 2,290,890 - CA264_09845 0.77 -0.2 2,290,960 - CA264_09845 0.85 -0.8 2,290,997 + CA264_09845 0.89 -0.1 2,291,081 + -0.5 2,291,295 - CA264_09850 0.15 +0.0 2,291,295 - CA264_09850 0.15 +0.4 2,291,359 + CA264_09850 0.21 -0.2 2,291,380 + CA264_09850 0.23 +0.7 2,291,391 + CA264_09850 0.24 -0.6 2,291,392 - CA264_09850 0.24 -0.6 2,291,392 - CA264_09850 0.24 -0.5 2,291,392 - CA264_09850 0.24 -0.0 2,291,412 + CA264_09850 0.25 -0.1 2,291,413 - CA264_09850 0.25 -0.5 2,291,413 - CA264_09850 0.25 +0.3 2,291,482 - CA264_09850 0.31 -1.3 2,291,482 - CA264_09850 0.31 -1.6 2,291,482 - CA264_09850 0.31 -1.0 2,291,574 + CA264_09850 0.39 +0.5 2,291,575 - CA264_09850 0.39 +0.8 2,291,583 - CA264_09850 0.40 +1.5 2,291,592 - CA264_09850 0.41 -0.7 2,291,635 + CA264_09850 0.44 +1.0 2,291,635 + CA264_09850 0.44 +0.2 2,291,646 - CA264_09850 0.45 -0.4 2,291,704 + CA264_09850 0.50 +1.5 2,291,723 + CA264_09850 0.52 -1.3 2,291,723 + CA264_09850 0.52 -0.4 2,291,724 - CA264_09850 0.52 -0.1 2,291,724 - CA264_09850 0.52 +0.2 2,291,757 + CA264_09850 0.54 +0.6 2,291,759 + CA264_09850 0.55 -0.1 2,291,760 - CA264_09850 0.55 +0.6 2,291,760 - CA264_09850 0.55 -1.6 2,291,791 - CA264_09850 0.57 -1.7 2,291,795 - CA264_09850 0.58 -0.5 2,291,816 - CA264_09850 0.59 +0.6 2,291,816 - CA264_09850 0.59 -0.8 2,291,816 - CA264_09850 0.59 -1.1 2,291,819 + CA264_09850 0.60 +0.4 2,291,820 - CA264_09850 0.60 -0.5 2,291,849 + CA264_09850 0.62 +0.7 2,291,850 - CA264_09850 0.62 -0.4 2,291,885 + CA264_09850 0.65 -0.4 2,291,886 - CA264_09850 0.65 +0.7 2,291,886 - CA264_09850 0.65 +0.4 2,291,896 + CA264_09850 0.66 +0.5 2,291,935 + CA264_09850 0.70 +0.5 2,291,935 + CA264_09850 0.70 +0.2 2,291,935 + CA264_09850 0.70 +0.2 2,291,936 - CA264_09850 0.70 -1.2 2,291,936 - CA264_09850 0.70 -1.9 2,291,936 - CA264_09850 0.70 +0.0 2,291,943 + CA264_09850 0.70 -0.3 2,291,948 - CA264_09850 0.71 -1.0 2,291,962 + CA264_09850 0.72 +0.2 2,291,967 + CA264_09850 0.72 +0.9 2,291,968 - CA264_09850 0.72 -0.5 2,291,970 + CA264_09850 0.73 +0.7 2,291,971 - CA264_09850 0.73 +0.0 2,291,991 - CA264_09850 0.74 -0.4 2,292,004 + CA264_09850 0.75 -0.2 2,292,004 + CA264_09850 0.75 +0.3 2,292,005 - CA264_09850 0.75 -0.6 2,292,005 - CA264_09850 0.75 -0.5 2,292,025 + CA264_09850 0.77 +0.2 2,292,034 + CA264_09850 0.78 -1.2 2,292,057 + CA264_09850 0.80 +1.0 2,292,058 - CA264_09850 0.80 -0.6
Or see this region's nucleotide sequence