Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09495 and CA264_09500 are separated by 24 nucleotides CA264_09500 and CA264_09505 are separated by 42 nucleotides CA264_09505 and CA264_09510 are separated by 371 nucleotides
CA264_09495: CA264_09495 - potassium-transporting ATPase subunit KdpA, at 2,218,915 to 2,220,612
_09495
CA264_09500: CA264_09500 - potassium-transporting ATPase subunit F, at 2,220,637 to 2,220,714
_09500
CA264_09505: CA264_09505 - hypothetical protein, at 2,220,757 to 2,221,107
_09505
CA264_09510: CA264_09510 - sigma-54-dependent Fis family transcriptional regulator, at 2,221,479 to 2,222,834
_09510
Position (kb)
2220
2221
2222 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2219.786 kb on + strand, within CA264_09495 at 2219.818 kb on + strand, within CA264_09495 at 2219.862 kb on + strand, within CA264_09495 at 2219.862 kb on + strand, within CA264_09495 at 2219.988 kb on + strand, within CA264_09495 at 2219.988 kb on + strand, within CA264_09495 at 2219.988 kb on + strand, within CA264_09495 at 2220.041 kb on - strand, within CA264_09495 at 2220.041 kb on - strand, within CA264_09495 at 2220.041 kb on - strand, within CA264_09495 at 2220.062 kb on - strand, within CA264_09495 at 2220.171 kb on + strand, within CA264_09495 at 2220.227 kb on + strand, within CA264_09495 at 2220.251 kb on + strand, within CA264_09495 at 2220.251 kb on + strand, within CA264_09495 at 2220.252 kb on - strand, within CA264_09495 at 2220.292 kb on - strand, within CA264_09495 at 2220.294 kb on + strand, within CA264_09495 at 2220.420 kb on + strand, within CA264_09495 at 2220.421 kb on - strand, within CA264_09495 at 2220.421 kb on - strand, within CA264_09495 at 2220.525 kb on - strand at 2220.527 kb on - strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.598 kb on + strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.600 kb on + strand at 2220.600 kb on + strand at 2220.601 kb on - strand at 2220.601 kb on - strand at 2220.639 kb on - strand at 2220.674 kb on + strand, within CA264_09500 at 2220.695 kb on - strand, within CA264_09500 at 2220.715 kb on - strand at 2220.727 kb on + strand at 2220.729 kb on + strand at 2220.730 kb on - strand at 2220.742 kb on + strand at 2220.742 kb on + strand at 2220.837 kb on + strand, within CA264_09505 at 2220.837 kb on + strand, within CA264_09505 at 2220.849 kb on - strand, within CA264_09505 at 2220.864 kb on - strand, within CA264_09505 at 2220.869 kb on + strand, within CA264_09505 at 2220.869 kb on + strand, within CA264_09505 at 2220.870 kb on - strand, within CA264_09505 at 2220.870 kb on - strand, within CA264_09505 at 2220.986 kb on + strand, within CA264_09505 at 2221.037 kb on - strand, within CA264_09505 at 2221.041 kb on + strand, within CA264_09505 at 2221.108 kb on - strand at 2221.222 kb on + strand at 2221.223 kb on - strand at 2221.227 kb on + strand at 2221.228 kb on - strand at 2221.277 kb on + strand at 2221.277 kb on + strand at 2221.277 kb on + strand at 2221.297 kb on + strand at 2221.310 kb on + strand at 2221.310 kb on + strand at 2221.408 kb on + strand at 2221.408 kb on + strand at 2221.410 kb on + strand at 2221.410 kb on + strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.437 kb on + strand at 2221.439 kb on + strand at 2221.443 kb on + strand at 2221.443 kb on + strand at 2221.443 kb on + strand at 2221.444 kb on - strand at 2221.462 kb on + strand at 2221.464 kb on + strand at 2221.464 kb on + strand at 2221.465 kb on - strand at 2221.465 kb on - strand at 2221.620 kb on - strand, within CA264_09510 at 2221.707 kb on + strand, within CA264_09510 at 2221.708 kb on - strand, within CA264_09510 at 2221.828 kb on + strand, within CA264_09510 at 2221.828 kb on + strand, within CA264_09510 at 2221.829 kb on - strand, within CA264_09510 at 2221.896 kb on + strand, within CA264_09510 at 2221.896 kb on + strand, within CA264_09510 at 2221.896 kb on + strand, within CA264_09510 at 2221.919 kb on - strand, within CA264_09510 at 2222.071 kb on - strand, within CA264_09510 at 2222.091 kb on + strand, within CA264_09510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,219,786 + CA264_09495 0.51 +0.1 2,219,818 + CA264_09495 0.53 -0.5 2,219,862 + CA264_09495 0.56 +0.2 2,219,862 + CA264_09495 0.56 +0.0 2,219,988 + CA264_09495 0.63 -2.0 2,219,988 + CA264_09495 0.63 -1.2 2,219,988 + CA264_09495 0.63 -0.4 2,220,041 - CA264_09495 0.66 -2.5 2,220,041 - CA264_09495 0.66 -2.7 2,220,041 - CA264_09495 0.66 -1.6 2,220,062 - CA264_09495 0.68 -2.7 2,220,171 + CA264_09495 0.74 +1.1 2,220,227 + CA264_09495 0.77 -2.3 2,220,251 + CA264_09495 0.79 -0.5 2,220,251 + CA264_09495 0.79 -1.7 2,220,252 - CA264_09495 0.79 -1.0 2,220,292 - CA264_09495 0.81 -1.6 2,220,294 + CA264_09495 0.81 -0.1 2,220,420 + CA264_09495 0.89 -1.0 2,220,421 - CA264_09495 0.89 -1.2 2,220,421 - CA264_09495 0.89 -2.1 2,220,525 - -1.2 2,220,527 - -1.3 2,220,539 + -1.0 2,220,539 + -2.1 2,220,539 + +0.1 2,220,539 + +0.1 2,220,539 + -0.6 2,220,598 + -0.4 2,220,599 - -0.6 2,220,599 - -2.2 2,220,599 - -1.4 2,220,599 - -1.6 2,220,600 + -0.8 2,220,600 + -0.2 2,220,601 - -2.2 2,220,601 - -3.2 2,220,639 - -3.3 2,220,674 + CA264_09500 0.47 -0.9 2,220,695 - CA264_09500 0.74 -1.1 2,220,715 - -1.1 2,220,727 + -3.1 2,220,729 + -1.3 2,220,730 - -3.3 2,220,742 + +1.0 2,220,742 + -0.9 2,220,837 + CA264_09505 0.23 -0.2 2,220,837 + CA264_09505 0.23 -2.3 2,220,849 - CA264_09505 0.26 -4.2 2,220,864 - CA264_09505 0.30 -1.2 2,220,869 + CA264_09505 0.32 -1.4 2,220,869 + CA264_09505 0.32 -2.4 2,220,870 - CA264_09505 0.32 -2.8 2,220,870 - CA264_09505 0.32 -2.9 2,220,986 + CA264_09505 0.65 -0.6 2,221,037 - CA264_09505 0.80 -2.1 2,221,041 + CA264_09505 0.81 -2.7 2,221,108 - -1.6 2,221,222 + -3.1 2,221,223 - -2.6 2,221,227 + -3.9 2,221,228 - -5.3 2,221,277 + -3.3 2,221,277 + -1.9 2,221,277 + -2.8 2,221,297 + -2.9 2,221,310 + -1.3 2,221,310 + -1.0 2,221,408 + -1.1 2,221,408 + +0.5 2,221,410 + +0.2 2,221,410 + +0.2 2,221,411 - -1.0 2,221,411 - -0.4 2,221,411 - -0.3 2,221,411 - -0.7 2,221,437 + +0.6 2,221,439 + -0.3 2,221,443 + -1.7 2,221,443 + +0.2 2,221,443 + -0.1 2,221,444 - -0.2 2,221,462 + +0.3 2,221,464 + +0.6 2,221,464 + +0.2 2,221,465 - -0.9 2,221,465 - -1.3 2,221,620 - CA264_09510 0.10 +0.1 2,221,707 + CA264_09510 0.17 +0.2 2,221,708 - CA264_09510 0.17 +1.4 2,221,828 + CA264_09510 0.26 +0.0 2,221,828 + CA264_09510 0.26 +0.0 2,221,829 - CA264_09510 0.26 -1.0 2,221,896 + CA264_09510 0.31 -0.3 2,221,896 + CA264_09510 0.31 -0.4 2,221,896 + CA264_09510 0.31 +1.0 2,221,919 - CA264_09510 0.32 +0.4 2,222,071 - CA264_09510 0.44 -0.1 2,222,091 + CA264_09510 0.45 -1.5
Or see this region's nucleotide sequence