Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09295 and CA264_09300 are separated by 251 nucleotides CA264_09300 and CA264_09305 are separated by 303 nucleotides CA264_09305 and CA264_09310 are separated by 89 nucleotides
CA264_09295: CA264_09295 - hypothetical protein, at 2,174,287 to 2,175,093
_09295
CA264_09300: CA264_09300 - EamA family transporter, at 2,175,345 to 2,176,259
_09300
CA264_09305: CA264_09305 - copper homeostasis protein, at 2,176,563 to 2,177,108
_09305
CA264_09310: CA264_09310 - tryptophan--tRNA ligase, at 2,177,198 to 2,178,172
_09310
Position (kb)
2175
2176
2177 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2174.405 kb on + strand, within CA264_09295 at 2174.478 kb on + strand, within CA264_09295 at 2174.532 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.738 kb on + strand, within CA264_09295 at 2174.831 kb on + strand, within CA264_09295 at 2174.906 kb on - strand, within CA264_09295 at 2174.925 kb on + strand, within CA264_09295 at 2174.926 kb on - strand, within CA264_09295 at 2174.959 kb on + strand, within CA264_09295 at 2174.960 kb on - strand, within CA264_09295 at 2174.960 kb on - strand, within CA264_09295 at 2175.004 kb on + strand, within CA264_09295 at 2175.005 kb on - strand, within CA264_09295 at 2175.016 kb on + strand at 2175.059 kb on + strand at 2175.060 kb on - strand at 2175.113 kb on + strand at 2175.155 kb on + strand at 2175.156 kb on - strand at 2175.158 kb on - strand at 2175.219 kb on + strand at 2175.220 kb on - strand at 2175.220 kb on - strand at 2175.248 kb on + strand at 2175.302 kb on - strand at 2175.344 kb on + strand at 2175.344 kb on + strand at 2175.344 kb on + strand at 2175.344 kb on + strand at 2175.345 kb on - strand at 2175.435 kb on - strand at 2175.578 kb on + strand, within CA264_09300 at 2175.838 kb on - strand, within CA264_09300 at 2175.940 kb on + strand, within CA264_09300 at 2176.118 kb on + strand, within CA264_09300 at 2176.178 kb on + strand at 2176.202 kb on + strand at 2176.257 kb on + strand at 2176.264 kb on + strand at 2176.286 kb on - strand at 2176.332 kb on + strand at 2176.345 kb on - strand at 2176.345 kb on - strand at 2176.441 kb on + strand at 2176.442 kb on - strand at 2176.442 kb on - strand at 2176.461 kb on - strand at 2176.482 kb on + strand at 2176.483 kb on - strand at 2176.485 kb on + strand at 2176.486 kb on - strand at 2176.487 kb on + strand at 2176.583 kb on + strand at 2176.586 kb on - strand at 2176.591 kb on + strand at 2176.813 kb on + strand, within CA264_09305 at 2176.814 kb on - strand, within CA264_09305 at 2176.865 kb on + strand, within CA264_09305 at 2176.866 kb on - strand, within CA264_09305 at 2176.881 kb on + strand, within CA264_09305 at 2176.881 kb on + strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.951 kb on + strand, within CA264_09305 at 2176.952 kb on - strand, within CA264_09305 at 2177.002 kb on + strand, within CA264_09305 at 2177.026 kb on + strand, within CA264_09305 at 2177.048 kb on - strand, within CA264_09305 at 2177.072 kb on + strand at 2177.089 kb on - strand at 2177.104 kb on + strand at 2177.105 kb on - strand at 2177.105 kb on - strand at 2177.105 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,174,405 + CA264_09295 0.15 +0.5 2,174,478 + CA264_09295 0.24 +0.4 2,174,532 + CA264_09295 0.30 +0.4 2,174,574 + CA264_09295 0.36 +0.2 2,174,574 + CA264_09295 0.36 -0.4 2,174,574 + CA264_09295 0.36 -1.1 2,174,574 + CA264_09295 0.36 -0.0 2,174,738 + CA264_09295 0.56 -0.8 2,174,831 + CA264_09295 0.67 +0.6 2,174,906 - CA264_09295 0.77 -1.1 2,174,925 + CA264_09295 0.79 -0.1 2,174,926 - CA264_09295 0.79 +0.1 2,174,959 + CA264_09295 0.83 +0.6 2,174,960 - CA264_09295 0.83 -0.4 2,174,960 - CA264_09295 0.83 +1.2 2,175,004 + CA264_09295 0.89 -0.0 2,175,005 - CA264_09295 0.89 +0.8 2,175,016 + +1.0 2,175,059 + -0.6 2,175,060 - -0.4 2,175,113 + +0.0 2,175,155 + -0.5 2,175,156 - -1.3 2,175,158 - -0.4 2,175,219 + +0.1 2,175,220 - -0.0 2,175,220 - +0.0 2,175,248 + -1.8 2,175,302 - +2.0 2,175,344 + -2.5 2,175,344 + -1.0 2,175,344 + -0.9 2,175,344 + -0.1 2,175,345 - -0.2 2,175,435 - -0.5 2,175,578 + CA264_09300 0.25 +0.1 2,175,838 - CA264_09300 0.54 -0.7 2,175,940 + CA264_09300 0.65 -1.7 2,176,118 + CA264_09300 0.84 -1.8 2,176,178 + -0.6 2,176,202 + -0.3 2,176,257 + -0.6 2,176,264 + -0.5 2,176,286 - -0.1 2,176,332 + +0.5 2,176,345 - +0.8 2,176,345 - -1.2 2,176,441 + -1.4 2,176,442 - +0.2 2,176,442 - +0.0 2,176,461 - +0.6 2,176,482 + -0.2 2,176,483 - +0.3 2,176,485 + +0.6 2,176,486 - +0.5 2,176,487 + +0.6 2,176,583 + -0.5 2,176,586 - -0.2 2,176,591 + +0.0 2,176,813 + CA264_09305 0.46 -0.2 2,176,814 - CA264_09305 0.46 +0.2 2,176,865 + CA264_09305 0.55 +0.3 2,176,866 - CA264_09305 0.55 -1.1 2,176,881 + CA264_09305 0.58 +0.7 2,176,881 + CA264_09305 0.58 -1.4 2,176,882 - CA264_09305 0.58 -0.6 2,176,882 - CA264_09305 0.58 -0.7 2,176,882 - CA264_09305 0.58 -0.6 2,176,882 - CA264_09305 0.58 -0.1 2,176,951 + CA264_09305 0.71 -2.4 2,176,952 - CA264_09305 0.71 -0.4 2,177,002 + CA264_09305 0.80 +0.4 2,177,026 + CA264_09305 0.85 +1.2 2,177,048 - CA264_09305 0.89 -0.8 2,177,072 + -0.7 2,177,089 - -0.4 2,177,104 + +0.1 2,177,105 - +0.2 2,177,105 - -0.8 2,177,105 - -1.4
Or see this region's nucleotide sequence