Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08705 and CA264_08710 are separated by 555 nucleotides CA264_08710 and CA264_08715 are separated by 37 nucleotides
CA264_08705: CA264_08705 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 2,022,890 to 2,024,308
_08705
CA264_08710: CA264_08710 - sugar kinase, at 2,024,864 to 2,026,114
_08710
CA264_08715: CA264_08715 - glucosamine-6-phosphate deaminase, at 2,026,152 to 2,028,116
_08715
Position (kb)
2024
2025
2026
2027 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2023.949 kb on + strand, within CA264_08705 at 2023.952 kb on + strand, within CA264_08705 at 2023.952 kb on + strand, within CA264_08705 at 2023.953 kb on - strand, within CA264_08705 at 2024.042 kb on + strand, within CA264_08705 at 2024.043 kb on - strand, within CA264_08705 at 2024.318 kb on - strand at 2024.342 kb on - strand at 2024.348 kb on + strand at 2024.349 kb on - strand at 2024.376 kb on - strand at 2024.379 kb on - strand at 2024.404 kb on - strand at 2024.404 kb on - strand at 2024.463 kb on - strand at 2024.498 kb on - strand at 2024.656 kb on - strand at 2024.656 kb on - strand at 2024.721 kb on + strand at 2024.859 kb on - strand at 2024.946 kb on + strand at 2024.965 kb on - strand at 2025.037 kb on - strand, within CA264_08710 at 2025.127 kb on + strand, within CA264_08710 at 2025.166 kb on + strand, within CA264_08710 at 2025.167 kb on - strand, within CA264_08710 at 2025.225 kb on - strand, within CA264_08710 at 2025.230 kb on + strand, within CA264_08710 at 2025.231 kb on - strand, within CA264_08710 at 2025.322 kb on - strand, within CA264_08710 at 2025.383 kb on + strand, within CA264_08710 at 2025.578 kb on - strand, within CA264_08710 at 2025.883 kb on - strand, within CA264_08710 at 2025.883 kb on - strand, within CA264_08710 at 2025.887 kb on - strand, within CA264_08710 at 2025.911 kb on - strand, within CA264_08710 at 2025.914 kb on - strand, within CA264_08710 at 2025.984 kb on - strand, within CA264_08710 at 2026.018 kb on - strand at 2026.018 kb on - strand at 2026.144 kb on - strand at 2026.144 kb on - strand at 2026.144 kb on - strand at 2026.145 kb on + strand at 2026.342 kb on + strand at 2026.380 kb on + strand, within CA264_08715 at 2026.381 kb on - strand, within CA264_08715 at 2026.381 kb on - strand, within CA264_08715 at 2026.418 kb on + strand, within CA264_08715 at 2026.456 kb on - strand, within CA264_08715 at 2026.456 kb on - strand, within CA264_08715 at 2026.458 kb on + strand, within CA264_08715 at 2026.488 kb on + strand, within CA264_08715 at 2026.591 kb on - strand, within CA264_08715 at 2026.602 kb on + strand, within CA264_08715 at 2026.602 kb on + strand, within CA264_08715 at 2026.603 kb on - strand, within CA264_08715 at 2026.615 kb on + strand, within CA264_08715 at 2026.624 kb on + strand, within CA264_08715 at 2026.625 kb on - strand, within CA264_08715 at 2026.680 kb on - strand, within CA264_08715 at 2026.920 kb on + strand, within CA264_08715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,023,949 + CA264_08705 0.75 +1.4 2,023,952 + CA264_08705 0.75 -1.0 2,023,952 + CA264_08705 0.75 +1.7 2,023,953 - CA264_08705 0.75 -0.3 2,024,042 + CA264_08705 0.81 -0.7 2,024,043 - CA264_08705 0.81 +0.1 2,024,318 - -0.6 2,024,342 - -0.7 2,024,348 + -3.2 2,024,349 - -0.4 2,024,376 - -0.5 2,024,379 - -1.0 2,024,404 - +0.1 2,024,404 - -1.7 2,024,463 - -2.0 2,024,498 - -1.1 2,024,656 - -1.0 2,024,656 - -0.8 2,024,721 + -0.4 2,024,859 - -0.6 2,024,946 + -2.3 2,024,965 - -0.8 2,025,037 - CA264_08710 0.14 -2.7 2,025,127 + CA264_08710 0.21 -3.5 2,025,166 + CA264_08710 0.24 -1.1 2,025,167 - CA264_08710 0.24 -0.7 2,025,225 - CA264_08710 0.29 -1.3 2,025,230 + CA264_08710 0.29 -1.5 2,025,231 - CA264_08710 0.29 -0.0 2,025,322 - CA264_08710 0.37 -0.3 2,025,383 + CA264_08710 0.41 -2.0 2,025,578 - CA264_08710 0.57 -0.2 2,025,883 - CA264_08710 0.81 -1.1 2,025,883 - CA264_08710 0.81 -1.0 2,025,887 - CA264_08710 0.82 -1.1 2,025,911 - CA264_08710 0.84 -1.5 2,025,914 - CA264_08710 0.84 -2.5 2,025,984 - CA264_08710 0.90 -1.3 2,026,018 - -0.0 2,026,018 - +1.1 2,026,144 - -0.3 2,026,144 - +1.1 2,026,144 - -1.1 2,026,145 + -1.1 2,026,342 + -3.0 2,026,380 + CA264_08715 0.12 -2.1 2,026,381 - CA264_08715 0.12 -1.9 2,026,381 - CA264_08715 0.12 +1.3 2,026,418 + CA264_08715 0.14 -0.2 2,026,456 - CA264_08715 0.15 +0.0 2,026,456 - CA264_08715 0.15 -1.4 2,026,458 + CA264_08715 0.16 -0.7 2,026,488 + CA264_08715 0.17 -0.2 2,026,591 - CA264_08715 0.22 +1.0 2,026,602 + CA264_08715 0.23 -2.9 2,026,602 + CA264_08715 0.23 -2.9 2,026,603 - CA264_08715 0.23 -0.1 2,026,615 + CA264_08715 0.24 -1.8 2,026,624 + CA264_08715 0.24 -0.9 2,026,625 - CA264_08715 0.24 -0.4 2,026,680 - CA264_08715 0.27 -0.3 2,026,920 + CA264_08715 0.39 -2.4
Or see this region's nucleotide sequence