Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08700 and CA264_08705 are separated by 13 nucleotides CA264_08705 and CA264_08710 are separated by 555 nucleotides
CA264_08700: CA264_08700 - SusC/RagA family TonB-linked outer membrane protein, at 2,019,652 to 2,022,876
_08700
CA264_08705: CA264_08705 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 2,022,890 to 2,024,308
_08705
CA264_08710: CA264_08710 - sugar kinase, at 2,024,864 to 2,026,114
_08710
Position (kb)
2022
2023
2024
2025 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2021.981 kb on - strand, within CA264_08700 at 2022.016 kb on - strand, within CA264_08700 at 2022.065 kb on + strand, within CA264_08700 at 2022.066 kb on - strand, within CA264_08700 at 2022.102 kb on + strand, within CA264_08700 at 2022.127 kb on + strand, within CA264_08700 at 2022.127 kb on + strand, within CA264_08700 at 2022.127 kb on + strand, within CA264_08700 at 2022.128 kb on - strand, within CA264_08700 at 2022.128 kb on - strand, within CA264_08700 at 2022.150 kb on - strand, within CA264_08700 at 2022.173 kb on - strand, within CA264_08700 at 2022.173 kb on - strand, within CA264_08700 at 2022.173 kb on - strand, within CA264_08700 at 2022.196 kb on + strand, within CA264_08700 at 2022.197 kb on - strand, within CA264_08700 at 2022.199 kb on - strand, within CA264_08700 at 2022.199 kb on - strand, within CA264_08700 at 2022.253 kb on + strand, within CA264_08700 at 2022.253 kb on + strand, within CA264_08700 at 2022.295 kb on - strand, within CA264_08700 at 2022.306 kb on + strand, within CA264_08700 at 2022.306 kb on + strand, within CA264_08700 at 2022.378 kb on + strand, within CA264_08700 at 2022.491 kb on + strand, within CA264_08700 at 2022.499 kb on - strand, within CA264_08700 at 2022.503 kb on - strand, within CA264_08700 at 2022.551 kb on + strand, within CA264_08700 at 2022.559 kb on + strand at 2022.559 kb on + strand at 2022.559 kb on + strand at 2022.560 kb on - strand at 2022.560 kb on - strand at 2022.607 kb on + strand at 2022.874 kb on + strand at 2022.875 kb on - strand at 2022.875 kb on - strand at 2022.875 kb on - strand at 2022.878 kb on + strand at 2022.879 kb on - strand at 2022.879 kb on - strand at 2022.916 kb on - strand at 2022.941 kb on - strand at 2022.941 kb on - strand at 2022.960 kb on + strand at 2022.961 kb on - strand at 2022.961 kb on - strand at 2023.091 kb on + strand, within CA264_08705 at 2023.092 kb on - strand, within CA264_08705 at 2023.110 kb on - strand, within CA264_08705 at 2023.111 kb on + strand, within CA264_08705 at 2023.112 kb on - strand, within CA264_08705 at 2023.121 kb on + strand, within CA264_08705 at 2023.133 kb on + strand, within CA264_08705 at 2023.133 kb on + strand, within CA264_08705 at 2023.134 kb on - strand, within CA264_08705 at 2023.136 kb on - strand, within CA264_08705 at 2023.139 kb on + strand, within CA264_08705 at 2023.139 kb on + strand, within CA264_08705 at 2023.140 kb on - strand, within CA264_08705 at 2023.140 kb on - strand, within CA264_08705 at 2023.142 kb on + strand, within CA264_08705 at 2023.142 kb on + strand, within CA264_08705 at 2023.142 kb on + strand, within CA264_08705 at 2023.143 kb on - strand, within CA264_08705 at 2023.143 kb on - strand, within CA264_08705 at 2023.144 kb on + strand, within CA264_08705 at 2023.145 kb on - strand, within CA264_08705 at 2023.213 kb on - strand, within CA264_08705 at 2023.250 kb on + strand, within CA264_08705 at 2023.293 kb on - strand, within CA264_08705 at 2023.334 kb on + strand, within CA264_08705 at 2023.334 kb on + strand, within CA264_08705 at 2023.335 kb on - strand, within CA264_08705 at 2023.335 kb on - strand, within CA264_08705 at 2023.335 kb on - strand, within CA264_08705 at 2023.355 kb on + strand, within CA264_08705 at 2023.356 kb on - strand, within CA264_08705 at 2023.356 kb on - strand, within CA264_08705 at 2023.426 kb on + strand, within CA264_08705 at 2023.427 kb on - strand, within CA264_08705 at 2023.427 kb on - strand, within CA264_08705 at 2023.447 kb on + strand, within CA264_08705 at 2023.448 kb on - strand, within CA264_08705 at 2023.468 kb on + strand, within CA264_08705 at 2023.469 kb on - strand, within CA264_08705 at 2023.568 kb on - strand, within CA264_08705 at 2023.620 kb on - strand, within CA264_08705 at 2023.658 kb on + strand, within CA264_08705 at 2023.685 kb on + strand, within CA264_08705 at 2023.686 kb on - strand, within CA264_08705 at 2023.732 kb on + strand, within CA264_08705 at 2023.749 kb on - strand, within CA264_08705 at 2023.804 kb on + strand, within CA264_08705 at 2023.819 kb on + strand, within CA264_08705 at 2023.819 kb on + strand, within CA264_08705 at 2023.820 kb on - strand, within CA264_08705 at 2023.949 kb on + strand, within CA264_08705 at 2023.952 kb on + strand, within CA264_08705 at 2023.952 kb on + strand, within CA264_08705 at 2023.953 kb on - strand, within CA264_08705 at 2024.042 kb on + strand, within CA264_08705 at 2024.043 kb on - strand, within CA264_08705 at 2024.318 kb on - strand at 2024.342 kb on - strand at 2024.348 kb on + strand at 2024.349 kb on - strand at 2024.376 kb on - strand at 2024.379 kb on - strand at 2024.404 kb on - strand at 2024.404 kb on - strand at 2024.463 kb on - strand at 2024.498 kb on - strand at 2024.656 kb on - strand at 2024.656 kb on - strand at 2024.721 kb on + strand at 2024.859 kb on - strand at 2024.946 kb on + strand at 2024.965 kb on - strand at 2025.037 kb on - strand, within CA264_08710 at 2025.127 kb on + strand, within CA264_08710 at 2025.166 kb on + strand, within CA264_08710 at 2025.167 kb on - strand, within CA264_08710 at 2025.225 kb on - strand, within CA264_08710 at 2025.230 kb on + strand, within CA264_08710 at 2025.231 kb on - strand, within CA264_08710
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,021,981 - CA264_08700 0.72 -0.3 2,022,016 - CA264_08700 0.73 +0.1 2,022,065 + CA264_08700 0.75 +0.3 2,022,066 - CA264_08700 0.75 -0.7 2,022,102 + CA264_08700 0.76 -0.4 2,022,127 + CA264_08700 0.77 -0.4 2,022,127 + CA264_08700 0.77 +0.0 2,022,127 + CA264_08700 0.77 -0.3 2,022,128 - CA264_08700 0.77 -0.7 2,022,128 - CA264_08700 0.77 +0.2 2,022,150 - CA264_08700 0.77 -1.1 2,022,173 - CA264_08700 0.78 +0.3 2,022,173 - CA264_08700 0.78 -0.1 2,022,173 - CA264_08700 0.78 -0.7 2,022,196 + CA264_08700 0.79 -0.1 2,022,197 - CA264_08700 0.79 -0.8 2,022,199 - CA264_08700 0.79 -0.9 2,022,199 - CA264_08700 0.79 -0.4 2,022,253 + CA264_08700 0.81 +0.5 2,022,253 + CA264_08700 0.81 +0.7 2,022,295 - CA264_08700 0.82 -0.7 2,022,306 + CA264_08700 0.82 +0.6 2,022,306 + CA264_08700 0.82 -1.3 2,022,378 + CA264_08700 0.85 -0.5 2,022,491 + CA264_08700 0.88 +0.3 2,022,499 - CA264_08700 0.88 -0.2 2,022,503 - CA264_08700 0.88 -1.3 2,022,551 + CA264_08700 0.90 -0.0 2,022,559 + +0.2 2,022,559 + -0.1 2,022,559 + +1.0 2,022,560 - +0.1 2,022,560 - -0.4 2,022,607 + -1.0 2,022,874 + +0.6 2,022,875 - -0.7 2,022,875 - -0.9 2,022,875 - -0.3 2,022,878 + -0.6 2,022,879 - +0.3 2,022,879 - -0.1 2,022,916 - +0.3 2,022,941 - -0.3 2,022,941 - +0.8 2,022,960 + -0.2 2,022,961 - -0.3 2,022,961 - -0.3 2,023,091 + CA264_08705 0.14 -0.4 2,023,092 - CA264_08705 0.14 -0.5 2,023,110 - CA264_08705 0.16 +0.3 2,023,111 + CA264_08705 0.16 -0.6 2,023,112 - CA264_08705 0.16 +0.0 2,023,121 + CA264_08705 0.16 +0.1 2,023,133 + CA264_08705 0.17 -0.8 2,023,133 + CA264_08705 0.17 +1.5 2,023,134 - CA264_08705 0.17 +0.3 2,023,136 - CA264_08705 0.17 -0.5 2,023,139 + CA264_08705 0.18 -0.0 2,023,139 + CA264_08705 0.18 -0.5 2,023,140 - CA264_08705 0.18 +0.8 2,023,140 - CA264_08705 0.18 -0.3 2,023,142 + CA264_08705 0.18 -0.7 2,023,142 + CA264_08705 0.18 -0.2 2,023,142 + CA264_08705 0.18 -0.7 2,023,143 - CA264_08705 0.18 -1.2 2,023,143 - CA264_08705 0.18 +1.7 2,023,144 + CA264_08705 0.18 -0.7 2,023,145 - CA264_08705 0.18 +0.1 2,023,213 - CA264_08705 0.23 +0.9 2,023,250 + CA264_08705 0.25 +0.4 2,023,293 - CA264_08705 0.28 -0.6 2,023,334 + CA264_08705 0.31 -1.9 2,023,334 + CA264_08705 0.31 +0.1 2,023,335 - CA264_08705 0.31 -0.7 2,023,335 - CA264_08705 0.31 -0.5 2,023,335 - CA264_08705 0.31 +0.4 2,023,355 + CA264_08705 0.33 -2.2 2,023,356 - CA264_08705 0.33 -0.1 2,023,356 - CA264_08705 0.33 -0.3 2,023,426 + CA264_08705 0.38 -1.2 2,023,427 - CA264_08705 0.38 +0.6 2,023,427 - CA264_08705 0.38 -0.7 2,023,447 + CA264_08705 0.39 -2.3 2,023,448 - CA264_08705 0.39 -0.3 2,023,468 + CA264_08705 0.41 +0.3 2,023,469 - CA264_08705 0.41 +0.5 2,023,568 - CA264_08705 0.48 -2.0 2,023,620 - CA264_08705 0.51 -0.1 2,023,658 + CA264_08705 0.54 -1.3 2,023,685 + CA264_08705 0.56 -0.7 2,023,686 - CA264_08705 0.56 +1.3 2,023,732 + CA264_08705 0.59 -1.2 2,023,749 - CA264_08705 0.61 -1.6 2,023,804 + CA264_08705 0.64 -0.7 2,023,819 + CA264_08705 0.65 +0.3 2,023,819 + CA264_08705 0.65 -0.9 2,023,820 - CA264_08705 0.66 -0.9 2,023,949 + CA264_08705 0.75 +1.4 2,023,952 + CA264_08705 0.75 -1.0 2,023,952 + CA264_08705 0.75 +1.7 2,023,953 - CA264_08705 0.75 -0.3 2,024,042 + CA264_08705 0.81 -0.7 2,024,043 - CA264_08705 0.81 +0.1 2,024,318 - -0.6 2,024,342 - -0.7 2,024,348 + -3.2 2,024,349 - -0.4 2,024,376 - -0.5 2,024,379 - -1.0 2,024,404 - +0.1 2,024,404 - -1.7 2,024,463 - -2.0 2,024,498 - -1.1 2,024,656 - -1.0 2,024,656 - -0.8 2,024,721 + -0.4 2,024,859 - -0.6 2,024,946 + -2.3 2,024,965 - -0.8 2,025,037 - CA264_08710 0.14 -2.7 2,025,127 + CA264_08710 0.21 -3.5 2,025,166 + CA264_08710 0.24 -1.1 2,025,167 - CA264_08710 0.24 -0.7 2,025,225 - CA264_08710 0.29 -1.3 2,025,230 + CA264_08710 0.29 -1.5 2,025,231 - CA264_08710 0.29 -0.0
Or see this region's nucleotide sequence