Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08340 and CA264_08345 are separated by 197 nucleotides CA264_08345 and CA264_08350 are separated by 5 nucleotides CA264_08350 and CA264_08355 are separated by 247 nucleotides
CA264_08340: CA264_08340 - tRNA-Glu, at 1,926,940 to 1,927,014
_08340
CA264_08345: CA264_08345 - DNA-binding response regulator, at 1,927,212 to 1,927,919
_08345
CA264_08350: CA264_08350 - hypothetical protein, at 1,927,925 to 1,928,980
_08350
CA264_08355: CA264_08355 - hypothetical protein, at 1,929,228 to 1,930,541
_08355
Position (kb)
1927
1928
1929 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1927.057 kb on - strand at 1927.057 kb on - strand at 1927.059 kb on - strand at 1927.082 kb on + strand at 1927.122 kb on - strand at 1927.140 kb on + strand at 1927.141 kb on - strand at 1927.167 kb on + strand at 1927.194 kb on + strand at 1927.195 kb on - strand at 1927.195 kb on - strand at 1927.196 kb on + strand at 1927.196 kb on + strand at 1927.197 kb on - strand at 1927.214 kb on - strand at 1927.217 kb on + strand at 1927.218 kb on - strand at 1927.253 kb on + strand at 1927.254 kb on - strand at 1927.282 kb on - strand at 1927.302 kb on + strand, within CA264_08345 at 1927.303 kb on - strand, within CA264_08345 at 1927.310 kb on + strand, within CA264_08345 at 1927.327 kb on - strand, within CA264_08345 at 1927.328 kb on + strand, within CA264_08345 at 1927.331 kb on + strand, within CA264_08345 at 1927.332 kb on - strand, within CA264_08345 at 1927.333 kb on + strand, within CA264_08345 at 1927.334 kb on - strand, within CA264_08345 at 1927.340 kb on + strand, within CA264_08345 at 1927.340 kb on + strand, within CA264_08345 at 1927.340 kb on + strand, within CA264_08345 at 1927.341 kb on - strand, within CA264_08345 at 1927.378 kb on - strand, within CA264_08345 at 1927.382 kb on + strand, within CA264_08345 at 1927.383 kb on - strand, within CA264_08345 at 1927.434 kb on + strand, within CA264_08345 at 1927.436 kb on + strand, within CA264_08345 at 1927.436 kb on + strand, within CA264_08345 at 1927.436 kb on + strand, within CA264_08345 at 1927.437 kb on - strand, within CA264_08345 at 1927.437 kb on - strand, within CA264_08345 at 1927.438 kb on + strand, within CA264_08345 at 1927.438 kb on + strand, within CA264_08345 at 1927.438 kb on + strand, within CA264_08345 at 1927.438 kb on + strand, within CA264_08345 at 1927.438 kb on + strand, within CA264_08345 at 1927.438 kb on + strand, within CA264_08345 at 1927.439 kb on - strand, within CA264_08345 at 1927.442 kb on + strand, within CA264_08345 at 1927.442 kb on + strand, within CA264_08345 at 1927.443 kb on - strand, within CA264_08345 at 1927.506 kb on - strand, within CA264_08345 at 1927.524 kb on - strand, within CA264_08345 at 1927.567 kb on - strand, within CA264_08345 at 1927.576 kb on + strand, within CA264_08345 at 1927.589 kb on + strand, within CA264_08345 at 1927.621 kb on - strand, within CA264_08345 at 1927.630 kb on - strand, within CA264_08345 at 1927.650 kb on - strand, within CA264_08345 at 1927.657 kb on + strand, within CA264_08345 at 1927.681 kb on + strand, within CA264_08345 at 1927.695 kb on + strand, within CA264_08345 at 1927.695 kb on + strand, within CA264_08345 at 1927.696 kb on - strand, within CA264_08345 at 1927.696 kb on - strand, within CA264_08345 at 1927.704 kb on - strand, within CA264_08345 at 1927.704 kb on - strand, within CA264_08345 at 1927.704 kb on - strand, within CA264_08345 at 1927.712 kb on + strand, within CA264_08345 at 1927.712 kb on + strand, within CA264_08345 at 1927.713 kb on - strand, within CA264_08345 at 1927.713 kb on - strand, within CA264_08345 at 1927.713 kb on - strand, within CA264_08345 at 1927.716 kb on + strand, within CA264_08345 at 1927.754 kb on + strand, within CA264_08345 at 1927.754 kb on + strand, within CA264_08345 at 1927.754 kb on + strand, within CA264_08345 at 1927.755 kb on - strand, within CA264_08345 at 1927.758 kb on + strand, within CA264_08345 at 1927.758 kb on + strand, within CA264_08345 at 1927.758 kb on + strand, within CA264_08345 at 1927.759 kb on - strand, within CA264_08345 at 1927.780 kb on - strand, within CA264_08345 at 1927.788 kb on - strand, within CA264_08345 at 1927.824 kb on - strand, within CA264_08345 at 1927.864 kb on + strand at 1927.987 kb on + strand at 1927.988 kb on - strand at 1928.108 kb on - strand, within CA264_08350 at 1928.110 kb on - strand, within CA264_08350 at 1928.110 kb on - strand, within CA264_08350 at 1928.132 kb on - strand, within CA264_08350 at 1928.135 kb on + strand, within CA264_08350 at 1928.135 kb on + strand, within CA264_08350 at 1928.135 kb on + strand, within CA264_08350 at 1928.135 kb on + strand, within CA264_08350 at 1928.135 kb on + strand, within CA264_08350 at 1928.136 kb on - strand, within CA264_08350 at 1928.137 kb on + strand, within CA264_08350 at 1928.138 kb on - strand, within CA264_08350 at 1928.138 kb on - strand, within CA264_08350 at 1928.138 kb on - strand, within CA264_08350 at 1928.203 kb on + strand, within CA264_08350 at 1928.204 kb on - strand, within CA264_08350 at 1928.238 kb on - strand, within CA264_08350 at 1928.250 kb on - strand, within CA264_08350 at 1928.302 kb on + strand, within CA264_08350 at 1928.310 kb on + strand, within CA264_08350 at 1928.356 kb on - strand, within CA264_08350 at 1928.365 kb on - strand, within CA264_08350 at 1928.396 kb on - strand, within CA264_08350 at 1928.452 kb on + strand, within CA264_08350 at 1928.496 kb on - strand, within CA264_08350 at 1928.571 kb on + strand, within CA264_08350 at 1928.571 kb on + strand, within CA264_08350 at 1928.591 kb on + strand, within CA264_08350 at 1928.592 kb on - strand, within CA264_08350 at 1928.593 kb on + strand, within CA264_08350 at 1928.593 kb on + strand, within CA264_08350 at 1928.593 kb on + strand, within CA264_08350 at 1928.593 kb on + strand, within CA264_08350 at 1928.594 kb on - strand, within CA264_08350 at 1928.618 kb on + strand, within CA264_08350 at 1928.671 kb on - strand, within CA264_08350 at 1928.793 kb on + strand, within CA264_08350 at 1928.793 kb on + strand, within CA264_08350 at 1928.838 kb on + strand, within CA264_08350 at 1928.838 kb on + strand, within CA264_08350 at 1928.838 kb on + strand, within CA264_08350 at 1928.840 kb on + strand, within CA264_08350 at 1928.841 kb on - strand, within CA264_08350 at 1928.842 kb on + strand, within CA264_08350 at 1928.842 kb on + strand, within CA264_08350 at 1928.843 kb on - strand, within CA264_08350 at 1928.884 kb on + strand at 1928.884 kb on + strand at 1928.885 kb on - strand at 1928.885 kb on - strand at 1928.893 kb on + strand at 1928.894 kb on - strand at 1928.894 kb on - strand at 1928.897 kb on + strand at 1928.921 kb on + strand at 1928.921 kb on + strand at 1928.940 kb on - strand at 1928.966 kb on + strand at 1928.966 kb on + strand at 1928.967 kb on - strand at 1929.031 kb on + strand at 1929.032 kb on - strand at 1929.032 kb on - strand at 1929.041 kb on + strand at 1929.046 kb on - strand at 1929.046 kb on - strand at 1929.046 kb on - strand at 1929.072 kb on + strand at 1929.072 kb on + strand at 1929.073 kb on - strand at 1929.094 kb on + strand at 1929.109 kb on + strand at 1929.110 kb on - strand at 1929.110 kb on - strand at 1929.110 kb on - strand at 1929.110 kb on - strand at 1929.123 kb on + strand at 1929.127 kb on + strand at 1929.174 kb on - strand at 1929.204 kb on + strand at 1929.220 kb on + strand at 1929.239 kb on + strand at 1929.247 kb on - strand at 1929.263 kb on - strand at 1929.282 kb on + strand at 1929.283 kb on - strand at 1929.306 kb on - strand at 1929.359 kb on - strand at 1929.359 kb on - strand at 1929.369 kb on + strand, within CA264_08355 at 1929.400 kb on + strand, within CA264_08355 at 1929.495 kb on - strand, within CA264_08355 at 1929.495 kb on - strand, within CA264_08355 at 1929.495 kb on - strand, within CA264_08355 at 1929.528 kb on + strand, within CA264_08355 at 1929.565 kb on + strand, within CA264_08355 at 1929.566 kb on - strand, within CA264_08355 at 1929.622 kb on - strand, within CA264_08355 at 1929.658 kb on + strand, within CA264_08355 at 1929.658 kb on + strand, within CA264_08355 at 1929.658 kb on + strand, within CA264_08355 at 1929.658 kb on + strand, within CA264_08355 at 1929.658 kb on + strand, within CA264_08355 at 1929.659 kb on - strand, within CA264_08355 at 1929.659 kb on - strand, within CA264_08355 at 1929.659 kb on - strand, within CA264_08355 at 1929.659 kb on - strand, within CA264_08355 at 1929.664 kb on - strand, within CA264_08355 at 1929.685 kb on + strand, within CA264_08355 at 1929.685 kb on + strand, within CA264_08355 at 1929.686 kb on - strand, within CA264_08355 at 1929.692 kb on + strand, within CA264_08355 at 1929.695 kb on + strand, within CA264_08355 at 1929.716 kb on - strand, within CA264_08355 at 1929.737 kb on - strand, within CA264_08355 at 1929.743 kb on + strand, within CA264_08355 at 1929.744 kb on - strand, within CA264_08355 at 1929.744 kb on - strand, within CA264_08355 at 1929.744 kb on - strand, within CA264_08355 at 1929.766 kb on + strand, within CA264_08355 at 1929.799 kb on + strand, within CA264_08355 at 1929.800 kb on - strand, within CA264_08355 at 1929.886 kb on - strand, within CA264_08355 at 1929.914 kb on - strand, within CA264_08355 at 1929.924 kb on - strand, within CA264_08355 at 1929.932 kb on - strand, within CA264_08355 at 1929.936 kb on - strand, within CA264_08355 at 1929.936 kb on - strand, within CA264_08355 at 1929.936 kb on - strand, within CA264_08355 at 1929.936 kb on - strand, within CA264_08355 at 1929.977 kb on + strand, within CA264_08355 at 1929.978 kb on - strand, within CA264_08355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,927,057 - -0.8 1,927,057 - +0.0 1,927,059 - -0.3 1,927,082 + -0.2 1,927,122 - -0.1 1,927,140 + +1.7 1,927,141 - +0.7 1,927,167 + -0.4 1,927,194 + +0.4 1,927,195 - -2.6 1,927,195 - +0.7 1,927,196 + +0.1 1,927,196 + -2.3 1,927,197 - +0.1 1,927,214 - +0.4 1,927,217 + +0.7 1,927,218 - +0.2 1,927,253 + +0.2 1,927,254 - -0.0 1,927,282 - -0.4 1,927,302 + CA264_08345 0.13 -0.0 1,927,303 - CA264_08345 0.13 -0.3 1,927,310 + CA264_08345 0.14 -0.0 1,927,327 - CA264_08345 0.16 +0.7 1,927,328 + CA264_08345 0.16 +0.8 1,927,331 + CA264_08345 0.17 +0.8 1,927,332 - CA264_08345 0.17 -0.3 1,927,333 + CA264_08345 0.17 +0.4 1,927,334 - CA264_08345 0.17 -1.4 1,927,340 + CA264_08345 0.18 +0.4 1,927,340 + CA264_08345 0.18 +0.1 1,927,340 + CA264_08345 0.18 -0.1 1,927,341 - CA264_08345 0.18 +0.0 1,927,378 - CA264_08345 0.23 +0.4 1,927,382 + CA264_08345 0.24 +0.4 1,927,383 - CA264_08345 0.24 -0.4 1,927,434 + CA264_08345 0.31 +0.6 1,927,436 + CA264_08345 0.32 -0.9 1,927,436 + CA264_08345 0.32 +0.1 1,927,436 + CA264_08345 0.32 -1.1 1,927,437 - CA264_08345 0.32 -0.5 1,927,437 - CA264_08345 0.32 -0.2 1,927,438 + CA264_08345 0.32 -1.2 1,927,438 + CA264_08345 0.32 -0.4 1,927,438 + CA264_08345 0.32 -0.2 1,927,438 + CA264_08345 0.32 -0.7 1,927,438 + CA264_08345 0.32 +0.1 1,927,438 + CA264_08345 0.32 -0.7 1,927,439 - CA264_08345 0.32 -0.7 1,927,442 + CA264_08345 0.32 +0.1 1,927,442 + CA264_08345 0.32 +0.3 1,927,443 - CA264_08345 0.33 -0.9 1,927,506 - CA264_08345 0.42 +0.4 1,927,524 - CA264_08345 0.44 +0.2 1,927,567 - CA264_08345 0.50 -1.6 1,927,576 + CA264_08345 0.51 +0.1 1,927,589 + CA264_08345 0.53 +0.3 1,927,621 - CA264_08345 0.58 -0.2 1,927,630 - CA264_08345 0.59 -0.4 1,927,650 - CA264_08345 0.62 +1.1 1,927,657 + CA264_08345 0.63 -0.8 1,927,681 + CA264_08345 0.66 -0.3 1,927,695 + CA264_08345 0.68 -0.4 1,927,695 + CA264_08345 0.68 -0.3 1,927,696 - CA264_08345 0.68 +0.1 1,927,696 - CA264_08345 0.68 -0.4 1,927,704 - CA264_08345 0.69 -0.3 1,927,704 - CA264_08345 0.69 +0.1 1,927,704 - CA264_08345 0.69 +0.3 1,927,712 + CA264_08345 0.71 +1.7 1,927,712 + CA264_08345 0.71 +0.4 1,927,713 - CA264_08345 0.71 -0.2 1,927,713 - CA264_08345 0.71 +0.2 1,927,713 - CA264_08345 0.71 -0.0 1,927,716 + CA264_08345 0.71 -0.5 1,927,754 + CA264_08345 0.77 -0.4 1,927,754 + CA264_08345 0.77 -0.7 1,927,754 + CA264_08345 0.77 +0.7 1,927,755 - CA264_08345 0.77 -2.0 1,927,758 + CA264_08345 0.77 -2.0 1,927,758 + CA264_08345 0.77 -0.1 1,927,758 + CA264_08345 0.77 +0.0 1,927,759 - CA264_08345 0.77 -1.0 1,927,780 - CA264_08345 0.80 +0.8 1,927,788 - CA264_08345 0.81 +0.0 1,927,824 - CA264_08345 0.86 -0.1 1,927,864 + -0.7 1,927,987 + -1.4 1,927,988 - -0.5 1,928,108 - CA264_08350 0.17 -2.0 1,928,110 - CA264_08350 0.18 -2.8 1,928,110 - CA264_08350 0.18 -2.0 1,928,132 - CA264_08350 0.20 -1.4 1,928,135 + CA264_08350 0.20 -1.8 1,928,135 + CA264_08350 0.20 -0.7 1,928,135 + CA264_08350 0.20 -1.5 1,928,135 + CA264_08350 0.20 -0.4 1,928,135 + CA264_08350 0.20 -1.9 1,928,136 - CA264_08350 0.20 -2.6 1,928,137 + CA264_08350 0.20 -1.0 1,928,138 - CA264_08350 0.20 -1.7 1,928,138 - CA264_08350 0.20 -2.8 1,928,138 - CA264_08350 0.20 -1.0 1,928,203 + CA264_08350 0.26 -0.8 1,928,204 - CA264_08350 0.26 -0.5 1,928,238 - CA264_08350 0.30 -2.2 1,928,250 - CA264_08350 0.31 -1.5 1,928,302 + CA264_08350 0.36 -0.7 1,928,310 + CA264_08350 0.36 -2.0 1,928,356 - CA264_08350 0.41 -1.8 1,928,365 - CA264_08350 0.42 -0.9 1,928,396 - CA264_08350 0.45 -2.6 1,928,452 + CA264_08350 0.50 -0.2 1,928,496 - CA264_08350 0.54 -1.9 1,928,571 + CA264_08350 0.61 -1.1 1,928,571 + CA264_08350 0.61 -1.5 1,928,591 + CA264_08350 0.63 +2.3 1,928,592 - CA264_08350 0.63 -0.9 1,928,593 + CA264_08350 0.63 -0.9 1,928,593 + CA264_08350 0.63 -3.1 1,928,593 + CA264_08350 0.63 -0.3 1,928,593 + CA264_08350 0.63 -1.8 1,928,594 - CA264_08350 0.63 -0.6 1,928,618 + CA264_08350 0.66 +0.3 1,928,671 - CA264_08350 0.71 -2.6 1,928,793 + CA264_08350 0.82 -1.5 1,928,793 + CA264_08350 0.82 -1.2 1,928,838 + CA264_08350 0.86 -0.8 1,928,838 + CA264_08350 0.86 -0.8 1,928,838 + CA264_08350 0.86 -0.9 1,928,840 + CA264_08350 0.87 -0.9 1,928,841 - CA264_08350 0.87 -1.8 1,928,842 + CA264_08350 0.87 -1.9 1,928,842 + CA264_08350 0.87 +0.5 1,928,843 - CA264_08350 0.87 -1.4 1,928,884 + -1.2 1,928,884 + -1.0 1,928,885 - -0.9 1,928,885 - -2.3 1,928,893 + -1.2 1,928,894 - -1.4 1,928,894 - -0.7 1,928,897 + -2.3 1,928,921 + -1.3 1,928,921 + -3.1 1,928,940 - -1.1 1,928,966 + +0.1 1,928,966 + -0.9 1,928,967 - -2.6 1,929,031 + -0.9 1,929,032 - +0.1 1,929,032 - +0.5 1,929,041 + -1.5 1,929,046 - -0.7 1,929,046 - -0.7 1,929,046 - -1.6 1,929,072 + -1.4 1,929,072 + -1.3 1,929,073 - -0.8 1,929,094 + -0.3 1,929,109 + -2.0 1,929,110 - +0.3 1,929,110 - -0.5 1,929,110 - -0.6 1,929,110 - -0.3 1,929,123 + -1.1 1,929,127 + -1.6 1,929,174 - +0.5 1,929,204 + +0.2 1,929,220 + +0.1 1,929,239 + +1.4 1,929,247 - -0.4 1,929,263 - -0.7 1,929,282 + -0.4 1,929,283 - -0.1 1,929,306 - -0.6 1,929,359 - +0.3 1,929,359 - -1.1 1,929,369 + CA264_08355 0.11 +1.2 1,929,400 + CA264_08355 0.13 -0.7 1,929,495 - CA264_08355 0.20 -0.4 1,929,495 - CA264_08355 0.20 -0.5 1,929,495 - CA264_08355 0.20 -2.3 1,929,528 + CA264_08355 0.23 +0.5 1,929,565 + CA264_08355 0.26 -0.9 1,929,566 - CA264_08355 0.26 +0.7 1,929,622 - CA264_08355 0.30 -0.1 1,929,658 + CA264_08355 0.33 -0.0 1,929,658 + CA264_08355 0.33 -0.3 1,929,658 + CA264_08355 0.33 -0.7 1,929,658 + CA264_08355 0.33 -1.4 1,929,658 + CA264_08355 0.33 -1.6 1,929,659 - CA264_08355 0.33 +0.8 1,929,659 - CA264_08355 0.33 +0.2 1,929,659 - CA264_08355 0.33 -1.7 1,929,659 - CA264_08355 0.33 +0.3 1,929,664 - CA264_08355 0.33 -0.1 1,929,685 + CA264_08355 0.35 -0.0 1,929,685 + CA264_08355 0.35 -0.5 1,929,686 - CA264_08355 0.35 -1.4 1,929,692 + CA264_08355 0.35 +0.3 1,929,695 + CA264_08355 0.36 -0.4 1,929,716 - CA264_08355 0.37 +0.2 1,929,737 - CA264_08355 0.39 -0.6 1,929,743 + CA264_08355 0.39 -0.0 1,929,744 - CA264_08355 0.39 +0.3 1,929,744 - CA264_08355 0.39 -0.2 1,929,744 - CA264_08355 0.39 +0.1 1,929,766 + CA264_08355 0.41 -0.8 1,929,799 + CA264_08355 0.43 -0.4 1,929,800 - CA264_08355 0.44 +0.7 1,929,886 - CA264_08355 0.50 +0.6 1,929,914 - CA264_08355 0.52 -0.5 1,929,924 - CA264_08355 0.53 +0.1 1,929,932 - CA264_08355 0.54 -0.1 1,929,936 - CA264_08355 0.54 -0.1 1,929,936 - CA264_08355 0.54 -0.1 1,929,936 - CA264_08355 0.54 +0.7 1,929,936 - CA264_08355 0.54 +0.1 1,929,977 + CA264_08355 0.57 +1.9 1,929,978 - CA264_08355 0.57 -0.9
Or see this region's nucleotide sequence