Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07975 and CA264_07980 are separated by 2 nucleotides CA264_07980 and CA264_07985 are separated by 30 nucleotides CA264_07985 and CA264_07990 are separated by 355 nucleotides
CA264_07975: CA264_07975 - pseudaminic acid synthase, at 1,844,349 to 1,845,401
_07975
CA264_07980: CA264_07980 - PIG-L family deacetylase, at 1,845,404 to 1,846,120
_07980
CA264_07985: CA264_07985 - hypothetical protein, at 1,846,151 to 1,847,428
_07985
CA264_07990: CA264_07990 - hypothetical protein, at 1,847,784 to 1,849,271
_07990
Position (kb)
1846
1847
1848 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1845.235 kb on - strand, within CA264_07975 at 1845.329 kb on + strand at 1845.330 kb on - strand at 1845.361 kb on + strand at 1845.399 kb on + strand at 1845.400 kb on - strand at 1845.490 kb on + strand, within CA264_07980 at 1845.491 kb on - strand, within CA264_07980 at 1845.547 kb on + strand, within CA264_07980 at 1845.548 kb on - strand, within CA264_07980 at 1845.617 kb on - strand, within CA264_07980 at 1845.699 kb on + strand, within CA264_07980 at 1845.703 kb on + strand, within CA264_07980 at 1845.703 kb on + strand, within CA264_07980 at 1845.704 kb on - strand, within CA264_07980 at 1845.704 kb on - strand, within CA264_07980 at 1845.813 kb on + strand, within CA264_07980 at 1845.813 kb on + strand, within CA264_07980 at 1845.814 kb on - strand, within CA264_07980 at 1845.855 kb on + strand, within CA264_07980 at 1845.855 kb on + strand, within CA264_07980 at 1845.922 kb on + strand, within CA264_07980 at 1845.923 kb on - strand, within CA264_07980 at 1845.944 kb on - strand, within CA264_07980 at 1845.967 kb on - strand, within CA264_07980 at 1846.038 kb on + strand, within CA264_07980 at 1846.038 kb on + strand, within CA264_07980 at 1846.039 kb on - strand, within CA264_07980 at 1846.039 kb on - strand, within CA264_07980 at 1846.065 kb on + strand at 1846.066 kb on - strand at 1846.118 kb on + strand at 1846.141 kb on + strand at 1846.141 kb on + strand at 1846.147 kb on - strand at 1846.168 kb on + strand at 1846.169 kb on - strand at 1846.169 kb on - strand at 1846.173 kb on - strand at 1846.173 kb on - strand at 1846.173 kb on - strand at 1846.185 kb on + strand at 1846.186 kb on - strand at 1846.274 kb on - strand at 1846.357 kb on - strand, within CA264_07985 at 1846.364 kb on + strand, within CA264_07985 at 1846.365 kb on - strand, within CA264_07985 at 1846.365 kb on - strand, within CA264_07985 at 1846.423 kb on + strand, within CA264_07985 at 1846.424 kb on - strand, within CA264_07985 at 1846.429 kb on - strand, within CA264_07985 at 1846.429 kb on - strand, within CA264_07985 at 1846.464 kb on - strand, within CA264_07985 at 1846.509 kb on - strand, within CA264_07985 at 1846.546 kb on - strand, within CA264_07985 at 1846.551 kb on - strand, within CA264_07985 at 1846.565 kb on - strand, within CA264_07985 at 1846.582 kb on + strand, within CA264_07985 at 1846.582 kb on + strand, within CA264_07985 at 1846.584 kb on + strand, within CA264_07985 at 1846.587 kb on + strand, within CA264_07985 at 1846.587 kb on + strand, within CA264_07985 at 1846.587 kb on + strand, within CA264_07985 at 1846.587 kb on + strand, within CA264_07985 at 1846.607 kb on + strand, within CA264_07985 at 1846.617 kb on - strand, within CA264_07985 at 1846.623 kb on - strand, within CA264_07985 at 1846.637 kb on + strand, within CA264_07985 at 1846.640 kb on - strand, within CA264_07985 at 1846.640 kb on - strand, within CA264_07985 at 1846.698 kb on + strand, within CA264_07985 at 1846.699 kb on - strand, within CA264_07985 at 1846.749 kb on + strand, within CA264_07985 at 1846.749 kb on + strand, within CA264_07985 at 1846.789 kb on - strand, within CA264_07985 at 1846.817 kb on + strand, within CA264_07985 at 1846.819 kb on + strand, within CA264_07985 at 1846.880 kb on + strand, within CA264_07985 at 1846.916 kb on - strand, within CA264_07985 at 1846.916 kb on - strand, within CA264_07985 at 1847.001 kb on + strand, within CA264_07985 at 1847.090 kb on - strand, within CA264_07985 at 1847.192 kb on + strand, within CA264_07985 at 1847.193 kb on - strand, within CA264_07985 at 1847.193 kb on - strand, within CA264_07985 at 1847.256 kb on + strand, within CA264_07985 at 1847.256 kb on + strand, within CA264_07985 at 1847.256 kb on + strand, within CA264_07985 at 1847.256 kb on + strand, within CA264_07985 at 1847.266 kb on + strand, within CA264_07985 at 1847.266 kb on + strand, within CA264_07985 at 1847.267 kb on - strand, within CA264_07985 at 1847.285 kb on - strand, within CA264_07985 at 1847.285 kb on - strand, within CA264_07985 at 1847.293 kb on + strand, within CA264_07985 at 1847.353 kb on + strand at 1847.378 kb on - strand at 1847.378 kb on - strand at 1847.392 kb on - strand at 1847.403 kb on - strand at 1847.406 kb on + strand at 1847.407 kb on - strand at 1847.407 kb on - strand at 1847.407 kb on - strand at 1847.439 kb on + strand at 1847.442 kb on + strand at 1847.453 kb on + strand at 1847.576 kb on - strand at 1847.579 kb on + strand at 1847.580 kb on - strand at 1847.590 kb on - strand at 1847.595 kb on + strand at 1847.628 kb on + strand at 1847.629 kb on - strand at 1847.631 kb on + strand at 1847.686 kb on - strand at 1847.690 kb on + strand at 1847.758 kb on - strand at 1847.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,845,235 - CA264_07975 0.84 +0.0 1,845,329 + -0.6 1,845,330 - -0.6 1,845,361 + -1.3 1,845,399 + -0.8 1,845,400 - +1.1 1,845,490 + CA264_07980 0.12 -0.2 1,845,491 - CA264_07980 0.12 +0.3 1,845,547 + CA264_07980 0.20 -0.7 1,845,548 - CA264_07980 0.20 -0.6 1,845,617 - CA264_07980 0.30 +0.4 1,845,699 + CA264_07980 0.41 +0.7 1,845,703 + CA264_07980 0.42 -0.8 1,845,703 + CA264_07980 0.42 -1.2 1,845,704 - CA264_07980 0.42 -0.7 1,845,704 - CA264_07980 0.42 -2.7 1,845,813 + CA264_07980 0.57 -0.9 1,845,813 + CA264_07980 0.57 -0.7 1,845,814 - CA264_07980 0.57 -0.6 1,845,855 + CA264_07980 0.63 -0.6 1,845,855 + CA264_07980 0.63 -0.4 1,845,922 + CA264_07980 0.72 -1.1 1,845,923 - CA264_07980 0.72 -0.6 1,845,944 - CA264_07980 0.75 -1.6 1,845,967 - CA264_07980 0.79 +0.9 1,846,038 + CA264_07980 0.88 -1.6 1,846,038 + CA264_07980 0.88 -0.4 1,846,039 - CA264_07980 0.89 -0.4 1,846,039 - CA264_07980 0.89 -2.5 1,846,065 + -1.6 1,846,066 - -0.3 1,846,118 + +0.1 1,846,141 + +1.1 1,846,141 + -0.6 1,846,147 - -0.0 1,846,168 + -0.7 1,846,169 - -1.0 1,846,169 - -1.5 1,846,173 - +0.1 1,846,173 - -2.0 1,846,173 - +0.1 1,846,185 + -1.4 1,846,186 - -1.4 1,846,274 - -1.2 1,846,357 - CA264_07985 0.16 -2.0 1,846,364 + CA264_07985 0.17 -2.2 1,846,365 - CA264_07985 0.17 -1.5 1,846,365 - CA264_07985 0.17 -1.4 1,846,423 + CA264_07985 0.21 -1.7 1,846,424 - CA264_07985 0.21 -1.6 1,846,429 - CA264_07985 0.22 -1.6 1,846,429 - CA264_07985 0.22 -0.1 1,846,464 - CA264_07985 0.24 -1.9 1,846,509 - CA264_07985 0.28 -1.9 1,846,546 - CA264_07985 0.31 -1.2 1,846,551 - CA264_07985 0.31 -2.0 1,846,565 - CA264_07985 0.32 -0.9 1,846,582 + CA264_07985 0.34 -0.3 1,846,582 + CA264_07985 0.34 -2.2 1,846,584 + CA264_07985 0.34 -2.1 1,846,587 + CA264_07985 0.34 -0.4 1,846,587 + CA264_07985 0.34 -0.3 1,846,587 + CA264_07985 0.34 -1.8 1,846,587 + CA264_07985 0.34 -2.7 1,846,607 + CA264_07985 0.36 -2.0 1,846,617 - CA264_07985 0.36 -2.3 1,846,623 - CA264_07985 0.37 +0.2 1,846,637 + CA264_07985 0.38 -0.9 1,846,640 - CA264_07985 0.38 +0.7 1,846,640 - CA264_07985 0.38 -1.1 1,846,698 + CA264_07985 0.43 -3.1 1,846,699 - CA264_07985 0.43 -0.3 1,846,749 + CA264_07985 0.47 -0.9 1,846,749 + CA264_07985 0.47 -0.3 1,846,789 - CA264_07985 0.50 -0.7 1,846,817 + CA264_07985 0.52 -2.0 1,846,819 + CA264_07985 0.52 -1.0 1,846,880 + CA264_07985 0.57 -1.0 1,846,916 - CA264_07985 0.60 -2.4 1,846,916 - CA264_07985 0.60 -0.1 1,847,001 + CA264_07985 0.67 +0.4 1,847,090 - CA264_07985 0.73 -1.3 1,847,192 + CA264_07985 0.81 -1.2 1,847,193 - CA264_07985 0.82 -2.3 1,847,193 - CA264_07985 0.82 -0.4 1,847,256 + CA264_07985 0.86 -1.5 1,847,256 + CA264_07985 0.86 -0.9 1,847,256 + CA264_07985 0.86 -0.6 1,847,256 + CA264_07985 0.86 -1.0 1,847,266 + CA264_07985 0.87 -0.3 1,847,266 + CA264_07985 0.87 -2.9 1,847,267 - CA264_07985 0.87 -0.3 1,847,285 - CA264_07985 0.89 -1.4 1,847,285 - CA264_07985 0.89 -2.0 1,847,293 + CA264_07985 0.89 +0.8 1,847,353 + -1.7 1,847,378 - -2.5 1,847,378 - -1.6 1,847,392 - -0.1 1,847,403 - -2.5 1,847,406 + +0.0 1,847,407 - -2.5 1,847,407 - +0.3 1,847,407 - -1.3 1,847,439 + +0.7 1,847,442 + -1.7 1,847,453 + -1.4 1,847,576 - +0.3 1,847,579 + +0.7 1,847,580 - -0.1 1,847,590 - -0.7 1,847,595 + -0.1 1,847,628 + +0.1 1,847,629 - -0.0 1,847,631 + +0.4 1,847,686 - +0.4 1,847,690 + -0.5 1,847,758 - -0.3 1,847,780 - -1.1
Or see this region's nucleotide sequence