Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07820 and CA264_07825 are separated by 65 nucleotides CA264_07825 and CA264_07830 are separated by 809 nucleotides
CA264_07820: CA264_07820 - hypothetical protein, at 1,810,463 to 1,811,539
_07820
CA264_07825: CA264_07825 - hypothetical protein, at 1,811,605 to 1,811,922
_07825
CA264_07830: CA264_07830 - hypothetical protein, at 1,812,732 to 1,813,991
_07830
Position (kb)
1811
1812 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1810.741 kb on - strand, within CA264_07820 at 1810.767 kb on - strand, within CA264_07820 at 1810.806 kb on + strand, within CA264_07820 at 1810.809 kb on + strand, within CA264_07820 at 1810.810 kb on - strand, within CA264_07820 at 1810.810 kb on - strand, within CA264_07820 at 1810.815 kb on + strand, within CA264_07820 at 1810.816 kb on - strand, within CA264_07820 at 1810.816 kb on - strand, within CA264_07820 at 1810.816 kb on - strand, within CA264_07820 at 1810.819 kb on + strand, within CA264_07820 at 1810.859 kb on + strand, within CA264_07820 at 1810.860 kb on - strand, within CA264_07820 at 1810.860 kb on - strand, within CA264_07820 at 1810.876 kb on + strand, within CA264_07820 at 1810.886 kb on + strand, within CA264_07820 at 1810.902 kb on + strand, within CA264_07820 at 1810.902 kb on + strand, within CA264_07820 at 1810.903 kb on - strand, within CA264_07820 at 1810.940 kb on + strand, within CA264_07820 at 1810.941 kb on - strand, within CA264_07820 at 1810.955 kb on + strand, within CA264_07820 at 1811.058 kb on + strand, within CA264_07820 at 1811.058 kb on + strand, within CA264_07820 at 1811.059 kb on - strand, within CA264_07820 at 1811.061 kb on + strand, within CA264_07820 at 1811.078 kb on - strand, within CA264_07820 at 1811.088 kb on + strand, within CA264_07820 at 1811.093 kb on + strand, within CA264_07820 at 1811.093 kb on + strand, within CA264_07820 at 1811.093 kb on + strand, within CA264_07820 at 1811.094 kb on - strand, within CA264_07820 at 1811.094 kb on - strand, within CA264_07820 at 1811.108 kb on + strand, within CA264_07820 at 1811.110 kb on + strand, within CA264_07820 at 1811.111 kb on - strand, within CA264_07820 at 1811.144 kb on + strand, within CA264_07820 at 1811.145 kb on - strand, within CA264_07820 at 1811.163 kb on - strand, within CA264_07820 at 1811.167 kb on - strand, within CA264_07820 at 1811.174 kb on + strand, within CA264_07820 at 1811.176 kb on + strand, within CA264_07820 at 1811.266 kb on + strand, within CA264_07820 at 1811.266 kb on + strand, within CA264_07820 at 1811.343 kb on - strand, within CA264_07820 at 1811.343 kb on - strand, within CA264_07820 at 1811.353 kb on + strand, within CA264_07820 at 1811.393 kb on - strand, within CA264_07820 at 1811.461 kb on + strand at 1811.517 kb on + strand at 1811.518 kb on - strand at 1811.518 kb on - strand at 1811.521 kb on - strand at 1811.521 kb on - strand at 1811.521 kb on - strand at 1811.547 kb on + strand at 1811.558 kb on + strand at 1811.576 kb on - strand at 1811.583 kb on + strand at 1811.583 kb on + strand at 1811.584 kb on - strand at 1811.584 kb on - strand at 1811.667 kb on - strand, within CA264_07825 at 1811.679 kb on - strand, within CA264_07825 at 1811.679 kb on - strand, within CA264_07825 at 1811.686 kb on + strand, within CA264_07825 at 1811.739 kb on - strand, within CA264_07825 at 1811.754 kb on + strand, within CA264_07825 at 1811.754 kb on + strand, within CA264_07825 at 1811.754 kb on + strand, within CA264_07825 at 1811.754 kb on + strand, within CA264_07825 at 1811.754 kb on + strand, within CA264_07825 at 1811.756 kb on + strand, within CA264_07825 at 1811.756 kb on + strand, within CA264_07825 at 1811.756 kb on + strand, within CA264_07825 at 1811.757 kb on - strand, within CA264_07825 at 1811.757 kb on - strand, within CA264_07825 at 1811.760 kb on + strand, within CA264_07825 at 1811.767 kb on + strand, within CA264_07825 at 1811.768 kb on - strand, within CA264_07825 at 1811.835 kb on - strand, within CA264_07825 at 1811.839 kb on + strand, within CA264_07825 at 1811.918 kb on + strand at 1811.918 kb on + strand at 1811.920 kb on + strand at 1811.920 kb on + strand at 1811.920 kb on + strand at 1811.920 kb on + strand at 1811.921 kb on - strand at 1811.931 kb on - strand at 1811.939 kb on + strand at 1811.984 kb on + strand at 1811.987 kb on + strand at 1812.022 kb on + strand at 1812.023 kb on - strand at 1812.050 kb on + strand at 1812.050 kb on + strand at 1812.051 kb on - strand at 1812.117 kb on + strand at 1812.118 kb on - strand at 1812.118 kb on - strand at 1812.120 kb on + strand at 1812.121 kb on - strand at 1812.121 kb on - strand at 1812.121 kb on - strand at 1812.121 kb on - strand at 1812.141 kb on + strand at 1812.162 kb on + strand at 1812.162 kb on + strand at 1812.163 kb on - strand at 1812.163 kb on - strand at 1812.163 kb on - strand at 1812.163 kb on - strand at 1812.216 kb on - strand at 1812.273 kb on - strand at 1812.295 kb on - strand at 1812.334 kb on + strand at 1812.343 kb on + strand at 1812.344 kb on - strand at 1812.344 kb on - strand at 1812.347 kb on + strand at 1812.347 kb on + strand at 1812.368 kb on + strand at 1812.417 kb on - strand at 1812.431 kb on + strand at 1812.431 kb on + strand at 1812.431 kb on + strand at 1812.431 kb on + strand at 1812.450 kb on + strand at 1812.450 kb on + strand at 1812.451 kb on - strand at 1812.535 kb on + strand at 1812.543 kb on + strand at 1812.559 kb on + strand at 1812.564 kb on + strand at 1812.580 kb on + strand at 1812.620 kb on + strand at 1812.624 kb on - strand at 1812.624 kb on - strand at 1812.668 kb on + strand at 1812.668 kb on + strand at 1812.668 kb on + strand at 1812.720 kb on - strand at 1812.726 kb on + strand at 1812.742 kb on + strand at 1812.743 kb on - strand at 1812.767 kb on + strand at 1812.767 kb on + strand at 1812.768 kb on - strand at 1812.773 kb on + strand at 1812.773 kb on + strand at 1812.773 kb on + strand at 1812.774 kb on - strand at 1812.774 kb on - strand at 1812.774 kb on - strand at 1812.785 kb on + strand at 1812.799 kb on - strand at 1812.857 kb on - strand at 1812.896 kb on - strand, within CA264_07830 at 1812.919 kb on - strand, within CA264_07830
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,810,741 - CA264_07820 0.26 -0.2 1,810,767 - CA264_07820 0.28 +1.0 1,810,806 + CA264_07820 0.32 +0.1 1,810,809 + CA264_07820 0.32 +0.4 1,810,810 - CA264_07820 0.32 -0.2 1,810,810 - CA264_07820 0.32 +0.4 1,810,815 + CA264_07820 0.33 +0.3 1,810,816 - CA264_07820 0.33 -0.6 1,810,816 - CA264_07820 0.33 -0.4 1,810,816 - CA264_07820 0.33 -1.9 1,810,819 + CA264_07820 0.33 +0.4 1,810,859 + CA264_07820 0.37 +0.2 1,810,860 - CA264_07820 0.37 -0.5 1,810,860 - CA264_07820 0.37 +1.0 1,810,876 + CA264_07820 0.38 -1.3 1,810,886 + CA264_07820 0.39 +0.4 1,810,902 + CA264_07820 0.41 +0.3 1,810,902 + CA264_07820 0.41 +0.7 1,810,903 - CA264_07820 0.41 -1.4 1,810,940 + CA264_07820 0.44 -0.0 1,810,941 - CA264_07820 0.44 +2.2 1,810,955 + CA264_07820 0.46 -0.1 1,811,058 + CA264_07820 0.55 -0.7 1,811,058 + CA264_07820 0.55 +0.7 1,811,059 - CA264_07820 0.55 +0.3 1,811,061 + CA264_07820 0.56 +0.6 1,811,078 - CA264_07820 0.57 +0.1 1,811,088 + CA264_07820 0.58 +1.0 1,811,093 + CA264_07820 0.58 -0.3 1,811,093 + CA264_07820 0.58 +0.4 1,811,093 + CA264_07820 0.58 +1.7 1,811,094 - CA264_07820 0.59 -1.1 1,811,094 - CA264_07820 0.59 +0.8 1,811,108 + CA264_07820 0.60 +1.7 1,811,110 + CA264_07820 0.60 +0.2 1,811,111 - CA264_07820 0.60 -0.8 1,811,144 + CA264_07820 0.63 +0.0 1,811,145 - CA264_07820 0.63 +0.8 1,811,163 - CA264_07820 0.65 -0.8 1,811,167 - CA264_07820 0.65 -1.2 1,811,174 + CA264_07820 0.66 +0.0 1,811,176 + CA264_07820 0.66 +1.0 1,811,266 + CA264_07820 0.75 -0.0 1,811,266 + CA264_07820 0.75 +0.7 1,811,343 - CA264_07820 0.82 +0.1 1,811,343 - CA264_07820 0.82 -0.1 1,811,353 + CA264_07820 0.83 +0.3 1,811,393 - CA264_07820 0.86 -0.2 1,811,461 + +0.5 1,811,517 + +0.1 1,811,518 - -0.0 1,811,518 - +0.5 1,811,521 - -0.1 1,811,521 - -0.7 1,811,521 - -0.6 1,811,547 + +0.4 1,811,558 + -0.9 1,811,576 - -0.5 1,811,583 + -0.2 1,811,583 + -0.3 1,811,584 - +0.4 1,811,584 - -1.9 1,811,667 - CA264_07825 0.19 -1.5 1,811,679 - CA264_07825 0.23 +0.0 1,811,679 - CA264_07825 0.23 -0.1 1,811,686 + CA264_07825 0.25 -0.6 1,811,739 - CA264_07825 0.42 +0.4 1,811,754 + CA264_07825 0.47 +1.0 1,811,754 + CA264_07825 0.47 +0.2 1,811,754 + CA264_07825 0.47 +0.7 1,811,754 + CA264_07825 0.47 +0.1 1,811,754 + CA264_07825 0.47 -0.2 1,811,756 + CA264_07825 0.47 +0.9 1,811,756 + CA264_07825 0.47 -0.4 1,811,756 + CA264_07825 0.47 -0.0 1,811,757 - CA264_07825 0.48 +0.2 1,811,757 - CA264_07825 0.48 -0.4 1,811,760 + CA264_07825 0.49 -1.2 1,811,767 + CA264_07825 0.51 -0.8 1,811,768 - CA264_07825 0.51 -0.3 1,811,835 - CA264_07825 0.72 -0.1 1,811,839 + CA264_07825 0.74 +0.6 1,811,918 + +0.2 1,811,918 + +0.6 1,811,920 + +0.0 1,811,920 + -0.2 1,811,920 + +0.6 1,811,920 + -1.6 1,811,921 - -0.1 1,811,931 - +0.2 1,811,939 + +0.1 1,811,984 + +0.7 1,811,987 + +0.3 1,812,022 + -0.2 1,812,023 - +0.6 1,812,050 + +0.3 1,812,050 + -0.0 1,812,051 - -0.3 1,812,117 + -2.4 1,812,118 - +0.5 1,812,118 - +0.2 1,812,120 + -1.5 1,812,121 - +0.8 1,812,121 - +0.1 1,812,121 - -0.1 1,812,121 - +0.3 1,812,141 + +0.7 1,812,162 + +0.2 1,812,162 + +0.2 1,812,163 - +0.4 1,812,163 - +0.7 1,812,163 - -1.2 1,812,163 - +0.2 1,812,216 - +0.5 1,812,273 - +1.6 1,812,295 - +0.3 1,812,334 + +0.1 1,812,343 + -0.7 1,812,344 - +0.9 1,812,344 - -0.5 1,812,347 + -0.9 1,812,347 + -0.3 1,812,368 + +0.1 1,812,417 - -0.8 1,812,431 + +0.6 1,812,431 + -0.3 1,812,431 + +0.5 1,812,431 + -0.5 1,812,450 + +0.8 1,812,450 + -0.4 1,812,451 - +1.0 1,812,535 + -0.1 1,812,543 + -0.5 1,812,559 + -0.4 1,812,564 + +0.2 1,812,580 + +0.7 1,812,620 + -0.1 1,812,624 - +1.5 1,812,624 - -1.4 1,812,668 + +0.8 1,812,668 + +0.2 1,812,668 + +0.9 1,812,720 - -0.4 1,812,726 + +1.6 1,812,742 + +0.7 1,812,743 - +0.3 1,812,767 + +0.7 1,812,767 + -0.6 1,812,768 - +0.3 1,812,773 + +0.7 1,812,773 + +0.7 1,812,773 + +0.7 1,812,774 - +0.3 1,812,774 - -0.3 1,812,774 - -0.2 1,812,785 + +0.8 1,812,799 - +0.7 1,812,857 - +0.1 1,812,896 - CA264_07830 0.13 -1.6 1,812,919 - CA264_07830 0.15 -0.3
Or see this region's nucleotide sequence