Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07795 and CA264_07800 are separated by 173 nucleotides CA264_07800 and CA264_07805 are separated by 3 nucleotides CA264_07805 and CA264_07810 are separated by 231 nucleotides CA264_07810 and CA264_07815 are separated by 159 nucleotides
CA264_07795: CA264_07795 - ATP-dependent DNA helicase, at 1,804,607 to 1,806,844
_07795
CA264_07800: CA264_07800 - hypothetical protein, at 1,807,018 to 1,807,677
_07800
CA264_07805: CA264_07805 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,807,681 to 1,808,985
_07805
CA264_07810: CA264_07810 - hypothetical protein, at 1,809,217 to 1,809,714
_07810
CA264_07815: CA264_07815 - hypothetical protein, at 1,809,874 to 1,810,335
_07815
Position (kb)
1807
1808
1809 Strain fitness (log2 ratio)
-1
0
1
2 at 1806.834 kb on + strand at 1806.843 kb on - strand at 1806.854 kb on - strand at 1806.867 kb on + strand at 1806.875 kb on - strand at 1806.909 kb on + strand at 1806.910 kb on - strand at 1806.910 kb on - strand at 1806.958 kb on - strand at 1806.959 kb on + strand at 1806.960 kb on - strand at 1806.971 kb on - strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.027 kb on - strand at 1807.027 kb on - strand at 1807.038 kb on + strand at 1807.064 kb on - strand at 1807.093 kb on + strand, within CA264_07800 at 1807.093 kb on + strand, within CA264_07800 at 1807.093 kb on + strand, within CA264_07800 at 1807.095 kb on + strand, within CA264_07800 at 1807.283 kb on - strand, within CA264_07800 at 1807.283 kb on - strand, within CA264_07800 at 1807.336 kb on - strand, within CA264_07800 at 1807.448 kb on - strand, within CA264_07800 at 1807.473 kb on + strand, within CA264_07800 at 1807.540 kb on + strand, within CA264_07800 at 1807.540 kb on + strand, within CA264_07800 at 1807.541 kb on - strand, within CA264_07800 at 1808.983 kb on + strand at 1809.138 kb on - strand at 1809.138 kb on - strand at 1809.264 kb on + strand at 1809.264 kb on + strand at 1809.265 kb on - strand at 1809.270 kb on + strand, within CA264_07810 at 1809.270 kb on + strand, within CA264_07810 at 1809.270 kb on + strand, within CA264_07810 at 1809.270 kb on + strand, within CA264_07810 at 1809.270 kb on + strand, within CA264_07810 at 1809.331 kb on + strand, within CA264_07810 at 1809.331 kb on + strand, within CA264_07810 at 1809.332 kb on - strand, within CA264_07810 at 1809.461 kb on + strand, within CA264_07810 at 1809.469 kb on + strand, within CA264_07810 at 1809.472 kb on - strand, within CA264_07810 at 1809.490 kb on + strand, within CA264_07810 at 1809.490 kb on + strand, within CA264_07810 at 1809.491 kb on - strand, within CA264_07810 at 1809.504 kb on - strand, within CA264_07810 at 1809.525 kb on + strand, within CA264_07810 at 1809.534 kb on - strand, within CA264_07810 at 1809.627 kb on + strand, within CA264_07810 at 1809.628 kb on - strand, within CA264_07810 at 1809.630 kb on + strand, within CA264_07810 at 1809.630 kb on + strand, within CA264_07810 at 1809.651 kb on + strand, within CA264_07810 at 1809.652 kb on - strand, within CA264_07810 at 1809.652 kb on - strand, within CA264_07810 at 1809.735 kb on + strand at 1809.762 kb on - strand at 1809.793 kb on + strand at 1809.823 kb on - strand at 1809.828 kb on - strand at 1809.830 kb on - strand at 1809.830 kb on - strand at 1809.859 kb on - strand at 1809.859 kb on - strand at 1809.859 kb on - strand at 1809.866 kb on - strand at 1809.866 kb on - strand at 1809.867 kb on + strand at 1809.902 kb on + strand at 1809.903 kb on - strand at 1809.919 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,806,834 + +0.5 1,806,843 - +0.4 1,806,854 - -0.1 1,806,867 + -0.4 1,806,875 - -0.4 1,806,909 + +0.7 1,806,910 - +0.1 1,806,910 - +0.6 1,806,958 - +0.3 1,806,959 + -1.5 1,806,960 - +0.5 1,806,971 - -0.2 1,807,026 + +0.4 1,807,026 + +0.1 1,807,026 + +0.7 1,807,026 + +0.1 1,807,027 - +1.2 1,807,027 - +0.9 1,807,038 + +1.1 1,807,064 - +1.1 1,807,093 + CA264_07800 0.11 +1.5 1,807,093 + CA264_07800 0.11 +1.1 1,807,093 + CA264_07800 0.11 +0.1 1,807,095 + CA264_07800 0.12 +0.9 1,807,283 - CA264_07800 0.40 +1.2 1,807,283 - CA264_07800 0.40 +1.1 1,807,336 - CA264_07800 0.48 +0.4 1,807,448 - CA264_07800 0.65 +0.8 1,807,473 + CA264_07800 0.69 +0.7 1,807,540 + CA264_07800 0.79 +1.1 1,807,540 + CA264_07800 0.79 +2.0 1,807,541 - CA264_07800 0.79 +0.8 1,808,983 + -0.5 1,809,138 - -0.3 1,809,138 - -0.4 1,809,264 + +0.1 1,809,264 + -1.2 1,809,265 - -0.4 1,809,270 + CA264_07810 0.11 -0.2 1,809,270 + CA264_07810 0.11 -1.1 1,809,270 + CA264_07810 0.11 -1.0 1,809,270 + CA264_07810 0.11 -0.7 1,809,270 + CA264_07810 0.11 +0.0 1,809,331 + CA264_07810 0.23 -0.5 1,809,331 + CA264_07810 0.23 -1.7 1,809,332 - CA264_07810 0.23 -0.7 1,809,461 + CA264_07810 0.49 +0.4 1,809,469 + CA264_07810 0.51 -0.1 1,809,472 - CA264_07810 0.51 -0.1 1,809,490 + CA264_07810 0.55 -0.5 1,809,490 + CA264_07810 0.55 +0.1 1,809,491 - CA264_07810 0.55 +0.4 1,809,504 - CA264_07810 0.58 +1.2 1,809,525 + CA264_07810 0.62 +0.0 1,809,534 - CA264_07810 0.64 +0.3 1,809,627 + CA264_07810 0.82 -0.3 1,809,628 - CA264_07810 0.83 +0.5 1,809,630 + CA264_07810 0.83 +0.2 1,809,630 + CA264_07810 0.83 -0.1 1,809,651 + CA264_07810 0.87 -0.6 1,809,652 - CA264_07810 0.87 +0.0 1,809,652 - CA264_07810 0.87 -0.2 1,809,735 + -0.3 1,809,762 - -0.1 1,809,793 + -1.0 1,809,823 - +0.0 1,809,828 - -1.5 1,809,830 - +0.3 1,809,830 - +0.1 1,809,859 - +0.6 1,809,859 - -0.6 1,809,859 - -0.8 1,809,866 - +0.2 1,809,866 - -0.0 1,809,867 + +0.5 1,809,902 + +0.6 1,809,903 - -1.0 1,809,919 - -0.4
Or see this region's nucleotide sequence