Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05530 and CA264_05535 are separated by 327 nucleotides CA264_05535 and CA264_05540 are separated by 73 nucleotides
CA264_05530: CA264_05530 - phosphoenolpyruvate carboxylase, at 1,284,041 to 1,286,626
_05530
CA264_05535: CA264_05535 - hypothetical protein, at 1,286,954 to 1,288,087
_05535
CA264_05540: CA264_05540 - DNA gyrase subunit A, at 1,288,161 to 1,290,725
_05540
Position (kb)
1286
1287
1288
1289 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1286.024 kb on + strand, within CA264_05530 at 1286.024 kb on + strand, within CA264_05530 at 1286.026 kb on + strand, within CA264_05530 at 1286.026 kb on + strand, within CA264_05530 at 1286.045 kb on + strand, within CA264_05530 at 1286.045 kb on + strand, within CA264_05530 at 1286.097 kb on + strand, within CA264_05530 at 1286.127 kb on - strand, within CA264_05530 at 1286.127 kb on - strand, within CA264_05530 at 1286.238 kb on - strand, within CA264_05530 at 1286.238 kb on - strand, within CA264_05530 at 1286.238 kb on - strand, within CA264_05530 at 1286.251 kb on - strand, within CA264_05530 at 1286.252 kb on + strand, within CA264_05530 at 1286.252 kb on + strand, within CA264_05530 at 1286.252 kb on + strand, within CA264_05530 at 1286.258 kb on - strand, within CA264_05530 at 1286.273 kb on - strand, within CA264_05530 at 1286.339 kb on + strand, within CA264_05530 at 1286.339 kb on + strand, within CA264_05530 at 1286.360 kb on - strand, within CA264_05530 at 1286.372 kb on + strand at 1286.372 kb on + strand at 1286.372 kb on + strand at 1286.564 kb on + strand at 1286.575 kb on - strand at 1286.575 kb on - strand at 1286.575 kb on - strand at 1286.686 kb on - strand at 1286.739 kb on - strand at 1286.791 kb on + strand at 1286.795 kb on + strand at 1286.921 kb on + strand at 1286.995 kb on + strand at 1286.995 kb on + strand at 1287.096 kb on + strand, within CA264_05535 at 1287.096 kb on + strand, within CA264_05535 at 1287.145 kb on + strand, within CA264_05535 at 1287.145 kb on + strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.151 kb on - strand, within CA264_05535 at 1287.151 kb on - strand, within CA264_05535 at 1287.195 kb on + strand, within CA264_05535 at 1287.214 kb on + strand, within CA264_05535 at 1287.216 kb on + strand, within CA264_05535 at 1287.217 kb on - strand, within CA264_05535 at 1287.262 kb on - strand, within CA264_05535 at 1287.405 kb on + strand, within CA264_05535 at 1287.405 kb on + strand, within CA264_05535 at 1287.405 kb on + strand, within CA264_05535 at 1287.516 kb on - strand, within CA264_05535 at 1287.528 kb on + strand, within CA264_05535 at 1287.528 kb on + strand, within CA264_05535 at 1287.571 kb on - strand, within CA264_05535 at 1287.592 kb on - strand, within CA264_05535 at 1287.803 kb on + strand, within CA264_05535 at 1287.814 kb on + strand, within CA264_05535 at 1287.814 kb on + strand, within CA264_05535 at 1287.814 kb on + strand, within CA264_05535 at 1287.815 kb on - strand, within CA264_05535 at 1287.835 kb on + strand, within CA264_05535 at 1287.836 kb on - strand, within CA264_05535 at 1287.896 kb on - strand, within CA264_05535 at 1287.940 kb on + strand, within CA264_05535 at 1288.129 kb on - strand at 1288.129 kb on - strand at 1288.129 kb on - strand at 1288.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,286,024 + CA264_05530 0.77 -0.2 1,286,024 + CA264_05530 0.77 -1.0 1,286,026 + CA264_05530 0.77 -0.2 1,286,026 + CA264_05530 0.77 +1.7 1,286,045 + CA264_05530 0.77 -1.2 1,286,045 + CA264_05530 0.77 -0.2 1,286,097 + CA264_05530 0.80 -0.7 1,286,127 - CA264_05530 0.81 -0.5 1,286,127 - CA264_05530 0.81 +0.6 1,286,238 - CA264_05530 0.85 +0.3 1,286,238 - CA264_05530 0.85 -0.1 1,286,238 - CA264_05530 0.85 -0.7 1,286,251 - CA264_05530 0.85 +1.3 1,286,252 + CA264_05530 0.85 +0.1 1,286,252 + CA264_05530 0.85 +1.0 1,286,252 + CA264_05530 0.85 +0.2 1,286,258 - CA264_05530 0.86 +0.5 1,286,273 - CA264_05530 0.86 +0.3 1,286,339 + CA264_05530 0.89 +0.8 1,286,339 + CA264_05530 0.89 +0.0 1,286,360 - CA264_05530 0.90 +0.5 1,286,372 + -0.7 1,286,372 + -0.4 1,286,372 + -1.7 1,286,564 + -0.4 1,286,575 - -0.7 1,286,575 - +1.2 1,286,575 - -0.6 1,286,686 - +0.3 1,286,739 - -0.8 1,286,791 + +0.8 1,286,795 + +0.7 1,286,921 + +1.6 1,286,995 + +1.8 1,286,995 + +2.2 1,287,096 + CA264_05535 0.13 +3.1 1,287,096 + CA264_05535 0.13 +2.1 1,287,145 + CA264_05535 0.17 +2.0 1,287,145 + CA264_05535 0.17 +2.7 1,287,146 - CA264_05535 0.17 +1.3 1,287,146 - CA264_05535 0.17 +2.3 1,287,146 - CA264_05535 0.17 +1.6 1,287,146 - CA264_05535 0.17 +0.8 1,287,146 - CA264_05535 0.17 +1.2 1,287,146 - CA264_05535 0.17 +1.3 1,287,150 + CA264_05535 0.17 +1.8 1,287,150 + CA264_05535 0.17 +2.0 1,287,150 + CA264_05535 0.17 +1.6 1,287,150 + CA264_05535 0.17 +1.8 1,287,151 - CA264_05535 0.17 +0.7 1,287,151 - CA264_05535 0.17 -0.9 1,287,195 + CA264_05535 0.21 +2.2 1,287,214 + CA264_05535 0.23 +2.0 1,287,216 + CA264_05535 0.23 +1.8 1,287,217 - CA264_05535 0.23 +1.5 1,287,262 - CA264_05535 0.27 +1.0 1,287,405 + CA264_05535 0.40 +2.1 1,287,405 + CA264_05535 0.40 +2.1 1,287,405 + CA264_05535 0.40 +2.9 1,287,516 - CA264_05535 0.50 +1.3 1,287,528 + CA264_05535 0.51 +1.8 1,287,528 + CA264_05535 0.51 +1.9 1,287,571 - CA264_05535 0.54 +1.2 1,287,592 - CA264_05535 0.56 +2.9 1,287,803 + CA264_05535 0.75 +2.9 1,287,814 + CA264_05535 0.76 +2.0 1,287,814 + CA264_05535 0.76 +1.7 1,287,814 + CA264_05535 0.76 +1.4 1,287,815 - CA264_05535 0.76 +2.1 1,287,835 + CA264_05535 0.78 +2.3 1,287,836 - CA264_05535 0.78 +1.4 1,287,896 - CA264_05535 0.83 +1.5 1,287,940 + CA264_05535 0.87 +2.5 1,288,129 - +0.4 1,288,129 - -0.8 1,288,129 - -0.2 1,288,294 - -1.4
Or see this region's nucleotide sequence