Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04375 and CA264_04380 are separated by 79 nucleotides CA264_04380 and CA264_04385 are separated by 287 nucleotides
CA264_04375: CA264_04375 - peptidase, at 1,012,890 to 1,013,804
_04375
CA264_04380: CA264_04380 - response regulator, at 1,013,884 to 1,015,050
_04380
CA264_04385: CA264_04385 - hypothetical protein, at 1,015,338 to 1,015,808
_04385
Position (kb)
1013
1014
1015
1016 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1012.907 kb on + strand at 1013.040 kb on + strand, within CA264_04375 at 1013.125 kb on + strand, within CA264_04375 at 1013.126 kb on - strand, within CA264_04375 at 1013.126 kb on - strand, within CA264_04375 at 1013.208 kb on + strand, within CA264_04375 at 1013.257 kb on - strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.325 kb on + strand, within CA264_04375 at 1013.326 kb on - strand, within CA264_04375 at 1013.330 kb on + strand, within CA264_04375 at 1013.330 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.396 kb on - strand, within CA264_04375 at 1013.396 kb on - strand, within CA264_04375 at 1013.495 kb on + strand, within CA264_04375 at 1013.496 kb on - strand, within CA264_04375 at 1013.496 kb on - strand, within CA264_04375 at 1013.509 kb on + strand, within CA264_04375 at 1013.509 kb on + strand, within CA264_04375 at 1013.547 kb on + strand, within CA264_04375 at 1013.651 kb on - strand, within CA264_04375 at 1013.772 kb on + strand at 1013.774 kb on + strand at 1013.906 kb on + strand at 1014.049 kb on - strand, within CA264_04380 at 1014.469 kb on - strand, within CA264_04380 at 1014.557 kb on - strand, within CA264_04380 at 1014.557 kb on - strand, within CA264_04380 at 1014.557 kb on - strand, within CA264_04380 at 1014.627 kb on + strand, within CA264_04380 at 1014.627 kb on + strand, within CA264_04380 at 1014.631 kb on + strand, within CA264_04380 at 1014.632 kb on - strand, within CA264_04380 at 1014.819 kb on + strand, within CA264_04380 at 1014.820 kb on - strand, within CA264_04380 at 1014.820 kb on - strand, within CA264_04380 at 1014.823 kb on - strand, within CA264_04380 at 1014.841 kb on + strand, within CA264_04380 at 1014.891 kb on + strand, within CA264_04380 at 1014.891 kb on + strand, within CA264_04380 at 1014.974 kb on + strand at 1014.974 kb on + strand at 1014.974 kb on + strand at 1014.975 kb on - strand at 1015.031 kb on - strand at 1015.050 kb on + strand at 1015.050 kb on + strand at 1015.060 kb on + strand at 1015.072 kb on + strand at 1015.076 kb on + strand at 1015.076 kb on + strand at 1015.077 kb on - strand at 1015.077 kb on - strand at 1015.078 kb on + strand at 1015.079 kb on - strand at 1015.083 kb on - strand at 1015.139 kb on - strand at 1015.148 kb on - strand at 1015.193 kb on - strand at 1015.198 kb on + strand at 1015.229 kb on + strand at 1015.230 kb on - strand at 1015.256 kb on + strand at 1015.256 kb on + strand at 1015.257 kb on - strand at 1015.257 kb on - strand at 1015.339 kb on + strand at 1015.340 kb on - strand at 1015.367 kb on + strand at 1015.367 kb on + strand at 1015.367 kb on + strand at 1015.368 kb on - strand at 1015.368 kb on - strand at 1015.368 kb on - strand at 1015.368 kb on - strand at 1015.372 kb on - strand at 1015.445 kb on - strand, within CA264_04385 at 1015.456 kb on + strand, within CA264_04385 at 1015.456 kb on + strand, within CA264_04385 at 1015.457 kb on - strand, within CA264_04385 at 1015.486 kb on - strand, within CA264_04385 at 1015.511 kb on + strand, within CA264_04385 at 1015.512 kb on - strand, within CA264_04385 at 1015.526 kb on - strand, within CA264_04385 at 1015.790 kb on + strand at 1015.798 kb on - strand at 1015.875 kb on - strand at 1015.875 kb on - strand at 1015.875 kb on - strand at 1015.875 kb on - strand at 1015.876 kb on + strand at 1015.876 kb on + strand at 1015.876 kb on + strand at 1015.876 kb on + strand at 1015.877 kb on + strand at 1015.880 kb on - strand at 1015.880 kb on - strand at 1015.897 kb on - strand at 1015.926 kb on + strand at 1015.991 kb on + strand at 1015.993 kb on + strand at 1015.996 kb on - strand at 1015.996 kb on - strand at 1015.998 kb on - strand at 1016.021 kb on + strand at 1016.030 kb on - strand at 1016.037 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,012,907 + -1.8 1,013,040 + CA264_04375 0.16 -0.9 1,013,125 + CA264_04375 0.26 +0.4 1,013,126 - CA264_04375 0.26 +0.1 1,013,126 - CA264_04375 0.26 +0.9 1,013,208 + CA264_04375 0.35 +0.1 1,013,257 - CA264_04375 0.40 -0.2 1,013,258 + CA264_04375 0.40 -1.4 1,013,258 + CA264_04375 0.40 +0.1 1,013,258 + CA264_04375 0.40 -1.0 1,013,325 + CA264_04375 0.48 -1.0 1,013,326 - CA264_04375 0.48 +0.8 1,013,330 + CA264_04375 0.48 -1.2 1,013,330 + CA264_04375 0.48 +0.2 1,013,395 + CA264_04375 0.55 -0.4 1,013,395 + CA264_04375 0.55 -0.2 1,013,395 + CA264_04375 0.55 -0.2 1,013,395 + CA264_04375 0.55 -0.6 1,013,395 + CA264_04375 0.55 -0.5 1,013,395 + CA264_04375 0.55 -1.2 1,013,396 - CA264_04375 0.55 +0.2 1,013,396 - CA264_04375 0.55 -1.7 1,013,495 + CA264_04375 0.66 -1.3 1,013,496 - CA264_04375 0.66 -0.6 1,013,496 - CA264_04375 0.66 +0.4 1,013,509 + CA264_04375 0.68 -0.6 1,013,509 + CA264_04375 0.68 -1.3 1,013,547 + CA264_04375 0.72 -0.4 1,013,651 - CA264_04375 0.83 +0.3 1,013,772 + -0.6 1,013,774 + -1.3 1,013,906 + -1.3 1,014,049 - CA264_04380 0.14 -1.3 1,014,469 - CA264_04380 0.50 -1.4 1,014,557 - CA264_04380 0.58 +0.4 1,014,557 - CA264_04380 0.58 -3.0 1,014,557 - CA264_04380 0.58 -1.7 1,014,627 + CA264_04380 0.64 -1.7 1,014,627 + CA264_04380 0.64 -0.9 1,014,631 + CA264_04380 0.64 -1.5 1,014,632 - CA264_04380 0.64 -1.1 1,014,819 + CA264_04380 0.80 +0.1 1,014,820 - CA264_04380 0.80 -1.2 1,014,820 - CA264_04380 0.80 -2.6 1,014,823 - CA264_04380 0.80 -2.6 1,014,841 + CA264_04380 0.82 -1.6 1,014,891 + CA264_04380 0.86 -1.7 1,014,891 + CA264_04380 0.86 -0.7 1,014,974 + -2.0 1,014,974 + -1.1 1,014,974 + -2.8 1,014,975 - -2.3 1,015,031 - -2.3 1,015,050 + -0.8 1,015,050 + -0.7 1,015,060 + -1.5 1,015,072 + -1.0 1,015,076 + +0.5 1,015,076 + -1.3 1,015,077 - +0.5 1,015,077 - -1.2 1,015,078 + -0.5 1,015,079 - -1.4 1,015,083 - +1.7 1,015,139 - +0.8 1,015,148 - -0.2 1,015,193 - +0.2 1,015,198 + +0.4 1,015,229 + +0.3 1,015,230 - -0.6 1,015,256 + +0.5 1,015,256 + -0.0 1,015,257 - +0.7 1,015,257 - +0.4 1,015,339 + -0.5 1,015,340 - +0.7 1,015,367 + +0.1 1,015,367 + -0.9 1,015,367 + +1.1 1,015,368 - +0.1 1,015,368 - -0.2 1,015,368 - -1.6 1,015,368 - -0.4 1,015,372 - +0.6 1,015,445 - CA264_04385 0.23 +1.1 1,015,456 + CA264_04385 0.25 -0.8 1,015,456 + CA264_04385 0.25 +0.7 1,015,457 - CA264_04385 0.25 -0.5 1,015,486 - CA264_04385 0.31 +0.9 1,015,511 + CA264_04385 0.37 -0.3 1,015,512 - CA264_04385 0.37 +1.3 1,015,526 - CA264_04385 0.40 +0.8 1,015,790 + +0.6 1,015,798 - -1.2 1,015,875 - +0.5 1,015,875 - +0.0 1,015,875 - +0.1 1,015,875 - +1.5 1,015,876 + -0.3 1,015,876 + -0.0 1,015,876 + +0.8 1,015,876 + -0.4 1,015,877 + -0.2 1,015,880 - -0.6 1,015,880 - -0.3 1,015,897 - +0.5 1,015,926 + -0.2 1,015,991 + -0.3 1,015,993 + -0.2 1,015,996 - -0.6 1,015,996 - -0.4 1,015,998 - +0.0 1,016,021 + -0.3 1,016,030 - +3.4 1,016,037 + -0.2
Or see this region's nucleotide sequence