Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04365

Experiment: m.b. copper (II) chloride 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04360 and CA264_04365 are separated by 119 nucleotidesCA264_04365 and CA264_04370 are separated by 108 nucleotides CA264_04360: CA264_04360 - transketolase, at 1,008,721 to 1,011,129 _04360 CA264_04365: CA264_04365 - hypothetical protein, at 1,011,249 to 1,011,782 _04365 CA264_04370: CA264_04370 - acyl transferase, at 1,011,891 to 1,012,856 _04370 Position (kb) 1011 1012Strain fitness (log2 ratio) -3 -2 -1 0 1at 1011.117 kb on + strandat 1011.125 kb on - strandat 1011.125 kb on - strandat 1011.125 kb on - strandat 1011.125 kb on - strandat 1011.191 kb on + strandat 1011.204 kb on + strandat 1011.204 kb on + strandat 1011.222 kb on + strandat 1011.222 kb on + strandat 1011.222 kb on + strandat 1011.222 kb on + strandat 1011.223 kb on - strandat 1011.244 kb on + strandat 1011.245 kb on - strandat 1011.246 kb on + strandat 1011.247 kb on - strandat 1011.250 kb on + strandat 1011.320 kb on + strand, within CA264_04365at 1011.321 kb on - strand, within CA264_04365at 1011.468 kb on - strand, within CA264_04365at 1011.468 kb on - strand, within CA264_04365at 1011.505 kb on - strand, within CA264_04365at 1011.505 kb on - strand, within CA264_04365at 1011.505 kb on - strand, within CA264_04365at 1011.507 kb on - strand, within CA264_04365at 1011.670 kb on + strand, within CA264_04365at 1011.670 kb on + strand, within CA264_04365at 1011.692 kb on + strand, within CA264_04365at 1011.712 kb on + strand, within CA264_04365at 1011.713 kb on - strand, within CA264_04365at 1011.713 kb on - strand, within CA264_04365at 1011.754 kb on - strandat 1011.777 kb on + strandat 1011.785 kb on - strandat 1011.785 kb on - strandat 1012.069 kb on + strand, within CA264_04370at 1012.174 kb on + strand, within CA264_04370at 1012.219 kb on - strand, within CA264_04370at 1012.326 kb on + strand, within CA264_04370at 1012.327 kb on - strand, within CA264_04370at 1012.555 kb on + strand, within CA264_04370at 1012.580 kb on + strand, within CA264_04370at 1012.580 kb on + strand, within CA264_04370at 1012.581 kb on - strand, within CA264_04370at 1012.581 kb on - strand, within CA264_04370at 1012.644 kb on - strand, within CA264_04370at 1012.720 kb on + strand, within CA264_04370at 1012.721 kb on - strand, within CA264_04370

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM
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1,011,117 + +0.1
1,011,125 - +0.0
1,011,125 - -0.7
1,011,125 - -1.0
1,011,125 - +0.8
1,011,191 + -1.3
1,011,204 + +1.4
1,011,204 + +0.2
1,011,222 + +0.8
1,011,222 + -0.4
1,011,222 + -0.5
1,011,222 + -0.5
1,011,223 - -0.8
1,011,244 + -0.5
1,011,245 - -1.0
1,011,246 + -0.7
1,011,247 - +0.7
1,011,250 + -1.1
1,011,320 + CA264_04365 0.13 -0.8
1,011,321 - CA264_04365 0.13 -1.7
1,011,468 - CA264_04365 0.41 -0.2
1,011,468 - CA264_04365 0.41 -0.7
1,011,505 - CA264_04365 0.48 -2.5
1,011,505 - CA264_04365 0.48 -2.2
1,011,505 - CA264_04365 0.48 -2.4
1,011,507 - CA264_04365 0.48 -0.7
1,011,670 + CA264_04365 0.79 -1.3
1,011,670 + CA264_04365 0.79 -1.0
1,011,692 + CA264_04365 0.83 -1.0
1,011,712 + CA264_04365 0.87 -2.8
1,011,713 - CA264_04365 0.87 -1.8
1,011,713 - CA264_04365 0.87 -2.5
1,011,754 - -1.1
1,011,777 + +0.1
1,011,785 - -0.5
1,011,785 - -0.0
1,012,069 + CA264_04370 0.18 +0.3
1,012,174 + CA264_04370 0.29 -0.6
1,012,219 - CA264_04370 0.34 -0.1
1,012,326 + CA264_04370 0.45 -0.6
1,012,327 - CA264_04370 0.45 -1.1
1,012,555 + CA264_04370 0.69 -1.0
1,012,580 + CA264_04370 0.71 +0.4
1,012,580 + CA264_04370 0.71 -0.5
1,012,581 - CA264_04370 0.71 -1.1
1,012,581 - CA264_04370 0.71 -0.5
1,012,644 - CA264_04370 0.78 -0.2
1,012,720 + CA264_04370 0.86 -0.2
1,012,721 - CA264_04370 0.86 -0.2

Or see this region's nucleotide sequence