Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03335 and CA264_03340 are separated by 1 nucleotides CA264_03340 and CA264_03345 are separated by 545 nucleotides
CA264_03335: CA264_03335 - glyoxylate/hydroxypyruvate reductase A, at 781,307 to 782,236
_03335
CA264_03340: CA264_03340 - dioxygenase, at 782,238 to 782,651
_03340
CA264_03345: CA264_03345 - hypothetical protein, at 783,197 to 784,594
_03345
Position (kb) 782
783 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 781.269 kb on + strand at 781.304 kb on + strand at 781.304 kb on + strand at 781.304 kb on + strand at 781.305 kb on - strand at 781.305 kb on - strand at 781.317 kb on + strand at 781.318 kb on - strand at 781.318 kb on - strand at 781.318 kb on - strand at 781.318 kb on - strand at 781.320 kb on + strand at 781.321 kb on - strand at 781.323 kb on + strand at 781.324 kb on - strand at 781.327 kb on + strand at 781.328 kb on - strand at 781.472 kb on + strand, within CA264_03335 at 781.570 kb on - strand, within CA264_03335 at 781.646 kb on + strand, within CA264_03335 at 781.647 kb on - strand, within CA264_03335 at 781.688 kb on + strand, within CA264_03335 at 781.689 kb on - strand, within CA264_03335 at 781.689 kb on - strand, within CA264_03335 at 781.782 kb on + strand, within CA264_03335 at 781.827 kb on + strand, within CA264_03335 at 781.830 kb on - strand, within CA264_03335 at 781.918 kb on - strand, within CA264_03335 at 781.959 kb on - strand, within CA264_03335 at 781.963 kb on + strand, within CA264_03335 at 781.964 kb on - strand, within CA264_03335 at 782.166 kb on + strand at 782.174 kb on + strand at 782.234 kb on + strand at 782.235 kb on - strand at 782.235 kb on - strand at 782.296 kb on - strand, within CA264_03340 at 782.303 kb on + strand, within CA264_03340 at 782.304 kb on - strand, within CA264_03340 at 782.306 kb on - strand, within CA264_03340 at 782.409 kb on + strand, within CA264_03340 at 782.410 kb on - strand, within CA264_03340 at 782.422 kb on + strand, within CA264_03340 at 782.460 kb on - strand, within CA264_03340 at 782.480 kb on + strand, within CA264_03340 at 782.481 kb on - strand, within CA264_03340 at 782.513 kb on + strand, within CA264_03340 at 782.514 kb on - strand, within CA264_03340 at 782.536 kb on - strand, within CA264_03340 at 782.666 kb on + strand at 782.932 kb on - strand at 782.946 kb on + strand at 782.964 kb on + strand at 782.973 kb on + strand at 782.977 kb on + strand at 782.977 kb on + strand at 782.978 kb on - strand at 782.990 kb on + strand at 782.997 kb on + strand at 782.998 kb on - strand at 783.005 kb on - strand at 783.012 kb on + strand at 783.012 kb on + strand at 783.012 kb on + strand at 783.012 kb on + strand at 783.014 kb on + strand at 783.014 kb on + strand at 783.015 kb on - strand at 783.015 kb on - strand at 783.021 kb on - strand at 783.028 kb on - strand at 783.136 kb on + strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.140 kb on - strand at 783.140 kb on - strand at 783.199 kb on - strand at 783.199 kb on - strand at 783.203 kb on - strand at 783.214 kb on + strand at 783.214 kb on + strand at 783.381 kb on - strand, within CA264_03345 at 783.381 kb on - strand, within CA264_03345 at 783.509 kb on + strand, within CA264_03345 at 783.603 kb on + strand, within CA264_03345 at 783.649 kb on - strand, within CA264_03345
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 781,269 + +0.3 781,304 + -0.1 781,304 + -0.5 781,304 + -0.2 781,305 - -0.4 781,305 - +1.2 781,317 + +0.9 781,318 - +0.9 781,318 - -0.5 781,318 - -0.6 781,318 - +0.4 781,320 + -2.3 781,321 - -0.3 781,323 + -0.9 781,324 - +0.2 781,327 + -0.5 781,328 - +0.7 781,472 + CA264_03335 0.18 -0.3 781,570 - CA264_03335 0.28 +0.7 781,646 + CA264_03335 0.36 +0.1 781,647 - CA264_03335 0.37 -0.5 781,688 + CA264_03335 0.41 -0.4 781,689 - CA264_03335 0.41 -0.4 781,689 - CA264_03335 0.41 -0.6 781,782 + CA264_03335 0.51 -0.7 781,827 + CA264_03335 0.56 -0.8 781,830 - CA264_03335 0.56 +0.3 781,918 - CA264_03335 0.66 +0.2 781,959 - CA264_03335 0.70 -0.5 781,963 + CA264_03335 0.71 +0.8 781,964 - CA264_03335 0.71 +0.2 782,166 + +0.2 782,174 + -0.8 782,234 + +0.7 782,235 - -0.2 782,235 - -0.8 782,296 - CA264_03340 0.14 +0.6 782,303 + CA264_03340 0.16 -0.3 782,304 - CA264_03340 0.16 -3.1 782,306 - CA264_03340 0.16 -0.0 782,409 + CA264_03340 0.41 -0.3 782,410 - CA264_03340 0.42 +0.2 782,422 + CA264_03340 0.44 -1.1 782,460 - CA264_03340 0.54 -0.4 782,480 + CA264_03340 0.58 -0.6 782,481 - CA264_03340 0.59 +0.9 782,513 + CA264_03340 0.66 +0.2 782,514 - CA264_03340 0.67 +0.3 782,536 - CA264_03340 0.72 +1.4 782,666 + -0.7 782,932 - +0.2 782,946 + +0.2 782,964 + +0.9 782,973 + -0.6 782,977 + -0.6 782,977 + -0.9 782,978 - -0.1 782,990 + +0.3 782,997 + -0.5 782,998 - +0.3 783,005 - +0.5 783,012 + -0.7 783,012 + -0.3 783,012 + +0.3 783,012 + -0.2 783,014 + +2.4 783,014 + +0.6 783,015 - +0.1 783,015 - -0.7 783,021 - +0.3 783,028 - +1.4 783,136 + -0.1 783,137 - -0.3 783,137 - +1.9 783,137 - +0.2 783,137 - +0.6 783,137 - +1.0 783,140 - +0.6 783,140 - -0.4 783,199 - +1.2 783,199 - -0.4 783,203 - +1.7 783,214 + +0.6 783,214 + -0.7 783,381 - CA264_03345 0.13 -0.3 783,381 - CA264_03345 0.13 +1.4 783,509 + CA264_03345 0.22 +0.0 783,603 + CA264_03345 0.29 +0.3 783,649 - CA264_03345 0.32 +0.9
Or see this region's nucleotide sequence