Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02405 and CA264_02410 are separated by 120 nucleotides CA264_02410 and CA264_02415 are separated by 151 nucleotides CA264_02415 and CA264_02420 overlap by 4 nucleotides
CA264_02405: CA264_02405 - beta-ketoacyl-ACP reductase, at 560,145 to 561,341
_02405
CA264_02410: CA264_02410 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 561,462 to 562,778
_02410
CA264_02415: CA264_02415 - dethiobiotin synthase, at 562,930 to 563,544
_02415
CA264_02420: CA264_02420 - 8-amino-7-oxononanoate synthase, at 563,541 to 564,671
_02420
Position (kb) 561
562
563 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 560.646 kb on + strand, within CA264_02405 at 560.646 kb on + strand, within CA264_02405 at 560.651 kb on + strand, within CA264_02405 at 560.652 kb on - strand, within CA264_02405 at 560.652 kb on - strand, within CA264_02405 at 560.693 kb on - strand, within CA264_02405 at 560.716 kb on + strand, within CA264_02405 at 560.855 kb on + strand, within CA264_02405 at 560.914 kb on - strand, within CA264_02405 at 560.957 kb on + strand, within CA264_02405 at 560.958 kb on - strand, within CA264_02405 at 560.977 kb on + strand, within CA264_02405 at 560.977 kb on + strand, within CA264_02405 at 560.978 kb on - strand, within CA264_02405 at 561.018 kb on + strand, within CA264_02405 at 561.019 kb on - strand, within CA264_02405 at 561.019 kb on - strand, within CA264_02405 at 561.162 kb on + strand, within CA264_02405 at 561.163 kb on - strand, within CA264_02405 at 561.321 kb on - strand at 561.357 kb on - strand at 561.363 kb on + strand at 561.364 kb on - strand at 561.364 kb on - strand at 561.364 kb on - strand at 561.430 kb on + strand at 561.432 kb on + strand at 561.433 kb on - strand at 561.433 kb on - strand at 561.437 kb on + strand at 561.437 kb on + strand at 561.438 kb on - strand at 561.545 kb on - strand at 561.545 kb on - strand at 561.577 kb on + strand at 561.587 kb on + strand at 561.588 kb on - strand at 561.593 kb on - strand at 561.593 kb on - strand at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.674 kb on - strand, within CA264_02410 at 561.711 kb on - strand, within CA264_02410 at 561.756 kb on - strand, within CA264_02410 at 561.795 kb on + strand, within CA264_02410 at 561.797 kb on + strand, within CA264_02410 at 561.798 kb on - strand, within CA264_02410 at 561.798 kb on - strand, within CA264_02410 at 561.866 kb on + strand, within CA264_02410 at 561.875 kb on - strand, within CA264_02410 at 562.139 kb on - strand, within CA264_02410 at 562.182 kb on - strand, within CA264_02410 at 562.228 kb on - strand, within CA264_02410 at 562.285 kb on + strand, within CA264_02410 at 562.355 kb on - strand, within CA264_02410 at 562.491 kb on + strand, within CA264_02410 at 562.535 kb on + strand, within CA264_02410 at 562.535 kb on + strand, within CA264_02410 at 562.569 kb on + strand, within CA264_02410 at 562.570 kb on - strand, within CA264_02410 at 562.597 kb on + strand, within CA264_02410 at 562.597 kb on + strand, within CA264_02410 at 562.624 kb on - strand, within CA264_02410 at 562.733 kb on + strand at 562.735 kb on + strand at 562.749 kb on - strand at 562.795 kb on + strand at 562.828 kb on - strand at 562.837 kb on + strand at 562.838 kb on - strand at 562.838 kb on - strand at 562.869 kb on - strand at 562.885 kb on + strand at 562.885 kb on + strand at 562.889 kb on + strand at 562.889 kb on + strand at 562.890 kb on - strand at 562.890 kb on - strand at 562.916 kb on + strand at 562.932 kb on - strand at 562.937 kb on + strand at 562.937 kb on + strand at 562.937 kb on + strand at 562.944 kb on + strand at 563.151 kb on - strand, within CA264_02415 at 563.357 kb on + strand, within CA264_02415 at 563.358 kb on - strand, within CA264_02415 at 563.482 kb on + strand, within CA264_02415 at 563.483 kb on - strand at 563.483 kb on - strand at 563.527 kb on + strand at 563.546 kb on + strand at 563.591 kb on + strand at 563.648 kb on + strand at 563.736 kb on + strand, within CA264_02420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 560,646 + CA264_02405 0.42 -0.2 560,646 + CA264_02405 0.42 -0.6 560,651 + CA264_02405 0.42 -0.3 560,652 - CA264_02405 0.42 +0.0 560,652 - CA264_02405 0.42 -1.0 560,693 - CA264_02405 0.46 -0.2 560,716 + CA264_02405 0.48 -0.3 560,855 + CA264_02405 0.59 -0.0 560,914 - CA264_02405 0.64 +0.4 560,957 + CA264_02405 0.68 -0.1 560,958 - CA264_02405 0.68 -0.3 560,977 + CA264_02405 0.70 -1.7 560,977 + CA264_02405 0.70 -0.1 560,978 - CA264_02405 0.70 -0.4 561,018 + CA264_02405 0.73 -1.1 561,019 - CA264_02405 0.73 -0.5 561,019 - CA264_02405 0.73 +0.8 561,162 + CA264_02405 0.85 -0.6 561,163 - CA264_02405 0.85 +0.5 561,321 - +1.4 561,357 - -0.0 561,363 + -1.2 561,364 - -0.2 561,364 - -1.2 561,364 - +1.0 561,430 + +1.0 561,432 + +0.5 561,433 - -1.0 561,433 - +0.8 561,437 + -0.1 561,437 + +0.6 561,438 - +0.7 561,545 - -0.2 561,545 - -0.3 561,577 + -0.1 561,587 + +0.2 561,588 - -0.2 561,593 - +1.9 561,593 - -0.1 561,596 + CA264_02410 0.10 +1.3 561,596 + CA264_02410 0.10 -0.0 561,596 + CA264_02410 0.10 +0.1 561,596 + CA264_02410 0.10 +0.8 561,596 + CA264_02410 0.10 -0.2 561,597 - CA264_02410 0.10 -0.9 561,597 - CA264_02410 0.10 -0.2 561,597 - CA264_02410 0.10 -0.4 561,597 - CA264_02410 0.10 +0.2 561,597 - CA264_02410 0.10 +0.1 561,597 - CA264_02410 0.10 -0.4 561,674 - CA264_02410 0.16 -0.0 561,711 - CA264_02410 0.19 -0.3 561,756 - CA264_02410 0.22 -0.6 561,795 + CA264_02410 0.25 -0.3 561,797 + CA264_02410 0.25 -1.2 561,798 - CA264_02410 0.26 +0.1 561,798 - CA264_02410 0.26 +0.6 561,866 + CA264_02410 0.31 -0.8 561,875 - CA264_02410 0.31 +0.4 562,139 - CA264_02410 0.51 -0.1 562,182 - CA264_02410 0.55 +0.1 562,228 - CA264_02410 0.58 +1.0 562,285 + CA264_02410 0.62 -0.2 562,355 - CA264_02410 0.68 -0.1 562,491 + CA264_02410 0.78 +0.1 562,535 + CA264_02410 0.81 -0.1 562,535 + CA264_02410 0.81 -3.9 562,569 + CA264_02410 0.84 -0.3 562,570 - CA264_02410 0.84 -0.1 562,597 + CA264_02410 0.86 +0.6 562,597 + CA264_02410 0.86 -0.1 562,624 - CA264_02410 0.88 +0.1 562,733 + +0.2 562,735 + +0.7 562,749 - -0.1 562,795 + -0.9 562,828 - -0.5 562,837 + -0.2 562,838 - +2.2 562,838 - -0.5 562,869 - -0.4 562,885 + -0.2 562,885 + -0.7 562,889 + -0.2 562,889 + -1.1 562,890 - -0.1 562,890 - +0.2 562,916 + -1.6 562,932 - -0.2 562,937 + -0.8 562,937 + +0.8 562,937 + +0.2 562,944 + +0.3 563,151 - CA264_02415 0.36 +0.0 563,357 + CA264_02415 0.69 +2.6 563,358 - CA264_02415 0.70 -0.1 563,482 + CA264_02415 0.90 -0.5 563,483 - +1.2 563,483 - -1.6 563,527 + +0.8 563,546 + +0.4 563,591 + +0.4 563,648 + -0.2 563,736 + CA264_02420 0.17 +0.9
Or see this region's nucleotide sequence