Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01980 and CA264_01985 are separated by 212 nucleotides CA264_01985 and CA264_01990 are separated by 134 nucleotides CA264_01990 and CA264_01995 are separated by 73 nucleotides CA264_01995 and CA264_02000 are separated by 104 nucleotides
CA264_01980: CA264_01980 - hypothetical protein, at 458,543 to 459,172
_01980
CA264_01985: CA264_01985 - tRNA-Lys, at 459,385 to 459,460
_01985
CA264_01990: CA264_01990 - tRNA-Lys, at 459,595 to 459,670
_01990
CA264_01995: CA264_01995 - SH3 domain-containing protein, at 459,744 to 460,481
_01995
CA264_02000: CA264_02000 - short chain dehydrogenase, at 460,586 to 461,395
_02000
Position (kb) 459
460
461 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 458.772 kb on - strand, within CA264_01980 at 458.772 kb on - strand, within CA264_01980 at 458.774 kb on - strand, within CA264_01980 at 458.799 kb on + strand, within CA264_01980 at 458.838 kb on + strand, within CA264_01980 at 458.907 kb on + strand, within CA264_01980 at 458.990 kb on + strand, within CA264_01980 at 458.991 kb on - strand, within CA264_01980 at 459.083 kb on - strand, within CA264_01980 at 459.085 kb on - strand, within CA264_01980 at 459.159 kb on - strand at 459.160 kb on + strand at 459.185 kb on - strand at 459.277 kb on + strand at 459.420 kb on - strand, within CA264_01985 at 459.425 kb on - strand, within CA264_01985 at 459.635 kb on - strand, within CA264_01990 at 459.643 kb on - strand, within CA264_01990 at 459.683 kb on - strand at 459.842 kb on + strand, within CA264_01995 at 459.894 kb on + strand, within CA264_01995 at 459.895 kb on - strand, within CA264_01995 at 459.954 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.996 kb on + strand, within CA264_01995 at 460.011 kb on + strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.089 kb on + strand, within CA264_01995 at 460.090 kb on - strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.184 kb on + strand, within CA264_01995 at 460.184 kb on + strand, within CA264_01995 at 460.191 kb on - strand, within CA264_01995 at 460.242 kb on - strand, within CA264_01995 at 460.283 kb on - strand, within CA264_01995 at 460.446 kb on + strand at 460.447 kb on - strand at 460.447 kb on - strand at 460.489 kb on + strand at 460.587 kb on + strand at 460.588 kb on - strand at 460.588 kb on - strand at 460.588 kb on - strand at 460.588 kb on - strand at 460.588 kb on - strand at 461.481 kb on + strand at 461.481 kb on + strand at 461.481 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 458,772 - CA264_01980 0.36 -1.7 458,772 - CA264_01980 0.36 -1.2 458,774 - CA264_01980 0.37 -1.3 458,799 + CA264_01980 0.41 -0.2 458,838 + CA264_01980 0.47 -1.7 458,907 + CA264_01980 0.58 -0.7 458,990 + CA264_01980 0.71 -0.6 458,991 - CA264_01980 0.71 -1.2 459,083 - CA264_01980 0.86 -1.0 459,085 - CA264_01980 0.86 -1.7 459,159 - -1.0 459,160 + +0.9 459,185 - -0.4 459,277 + +0.2 459,420 - CA264_01985 0.46 +0.4 459,425 - CA264_01985 0.53 +0.9 459,635 - CA264_01990 0.53 -0.6 459,643 - CA264_01990 0.63 +0.8 459,683 - +0.0 459,842 + CA264_01995 0.13 -1.8 459,894 + CA264_01995 0.20 -2.9 459,895 - CA264_01995 0.20 -1.0 459,954 + CA264_01995 0.28 -3.0 459,993 + CA264_01995 0.34 -1.0 459,993 + CA264_01995 0.34 -1.2 459,996 + CA264_01995 0.34 -1.2 460,011 + CA264_01995 0.36 -0.4 460,012 - CA264_01995 0.36 -1.6 460,012 - CA264_01995 0.36 -1.4 460,075 + CA264_01995 0.45 +2.0 460,075 + CA264_01995 0.45 +0.3 460,089 + CA264_01995 0.47 -1.6 460,090 - CA264_01995 0.47 -0.8 460,131 + CA264_01995 0.52 -0.4 460,131 + CA264_01995 0.52 -0.9 460,131 + CA264_01995 0.52 -1.3 460,131 + CA264_01995 0.52 -0.5 460,132 - CA264_01995 0.53 -0.5 460,132 - CA264_01995 0.53 -0.9 460,132 - CA264_01995 0.53 -0.9 460,184 + CA264_01995 0.60 -1.4 460,184 + CA264_01995 0.60 -0.6 460,191 - CA264_01995 0.61 -2.4 460,242 - CA264_01995 0.67 -1.3 460,283 - CA264_01995 0.73 +0.0 460,446 + -2.3 460,447 - -0.9 460,447 - -0.9 460,489 + +0.1 460,587 + -0.0 460,588 - -0.2 460,588 - -0.4 460,588 - +1.5 460,588 - -1.2 460,588 - -0.2 461,481 + -0.0 461,481 + +0.6 461,481 + -0.3
Or see this region's nucleotide sequence