Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01785 and CA264_01790 are separated by 33 nucleotides CA264_01790 and CA264_01795 are separated by 154 nucleotides CA264_01795 and CA264_01800 are separated by 144 nucleotides CA264_01800 and CA264_01805 are separated by 38 nucleotides
CA264_01785: CA264_01785 - hypothetical protein, at 422,356 to 422,796
_01785
CA264_01790: CA264_01790 - hypothetical protein, at 422,830 to 423,120
_01790
CA264_01795: CA264_01795 - hypothetical protein, at 423,275 to 423,592
_01795
CA264_01800: CA264_01800 - gluconate kinase, at 423,737 to 425,260
_01800
CA264_01805: CA264_01805 - 6-phosphogluconate dehydrogenase (decarboxylating), at 425,299 to 426,198
_01805
Position (kb) 423
424
425
426 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 422.790 kb on + strand at 422.829 kb on + strand at 422.918 kb on + strand, within CA264_01790 at 422.978 kb on + strand, within CA264_01790 at 423.136 kb on + strand at 423.137 kb on - strand at 423.142 kb on + strand at 423.142 kb on + strand at 423.143 kb on - strand at 423.143 kb on - strand at 423.161 kb on + strand at 423.177 kb on + strand at 423.178 kb on - strand at 423.254 kb on - strand at 423.338 kb on - strand, within CA264_01795 at 423.390 kb on - strand, within CA264_01795 at 423.501 kb on - strand, within CA264_01795 at 423.624 kb on - strand at 423.635 kb on + strand at 423.635 kb on + strand at 423.636 kb on - strand at 423.636 kb on - strand at 423.673 kb on + strand at 423.673 kb on + strand at 423.673 kb on + strand at 423.685 kb on + strand at 423.686 kb on - strand at 423.686 kb on - strand at 423.696 kb on + strand at 423.708 kb on + strand at 423.708 kb on + strand at 423.708 kb on + strand at 423.709 kb on - strand at 423.712 kb on + strand at 423.712 kb on + strand at 423.713 kb on - strand at 423.713 kb on - strand at 423.723 kb on - strand at 423.755 kb on - strand at 423.822 kb on - strand at 423.849 kb on + strand at 424.104 kb on + strand, within CA264_01800 at 424.104 kb on + strand, within CA264_01800 at 424.104 kb on + strand, within CA264_01800 at 424.104 kb on + strand, within CA264_01800 at 424.104 kb on + strand, within CA264_01800 at 424.105 kb on - strand, within CA264_01800 at 424.105 kb on - strand, within CA264_01800 at 424.107 kb on - strand, within CA264_01800 at 424.232 kb on + strand, within CA264_01800 at 424.253 kb on - strand, within CA264_01800 at 424.341 kb on + strand, within CA264_01800 at 424.341 kb on + strand, within CA264_01800 at 424.380 kb on - strand, within CA264_01800 at 424.380 kb on - strand, within CA264_01800 at 424.407 kb on - strand, within CA264_01800 at 424.407 kb on - strand, within CA264_01800 at 424.420 kb on + strand, within CA264_01800 at 424.593 kb on - strand, within CA264_01800 at 424.677 kb on - strand, within CA264_01800 at 424.721 kb on + strand, within CA264_01800 at 424.722 kb on - strand, within CA264_01800 at 424.853 kb on + strand, within CA264_01800 at 424.854 kb on - strand, within CA264_01800 at 424.854 kb on - strand, within CA264_01800 at 425.090 kb on + strand, within CA264_01800 at 425.091 kb on - strand, within CA264_01800 at 425.091 kb on - strand, within CA264_01800 at 425.091 kb on - strand, within CA264_01800 at 425.091 kb on - strand, within CA264_01800 at 425.091 kb on - strand, within CA264_01800 at 425.183 kb on + strand at 425.184 kb on - strand at 425.196 kb on - strand at 425.258 kb on + strand at 425.258 kb on + strand at 425.258 kb on + strand at 425.259 kb on - strand at 425.259 kb on - strand at 425.259 kb on - strand at 425.259 kb on - strand at 425.262 kb on + strand at 425.262 kb on + strand at 425.263 kb on - strand at 425.263 kb on - strand at 425.265 kb on - strand at 425.268 kb on + strand at 425.268 kb on - strand at 425.269 kb on - strand at 425.269 kb on - strand at 425.336 kb on - strand at 425.478 kb on + strand, within CA264_01805 at 425.550 kb on - strand, within CA264_01805 at 425.833 kb on + strand, within CA264_01805 at 425.878 kb on - strand, within CA264_01805 at 426.126 kb on + strand at 426.126 kb on + strand at 426.127 kb on - strand at 426.236 kb on + strand at 426.236 kb on + strand at 426.240 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 422,790 + -1.1 422,829 + +1.2 422,918 + CA264_01790 0.30 +0.1 422,978 + CA264_01790 0.51 -0.4 423,136 + -0.3 423,137 - -0.5 423,142 + -0.3 423,142 + -0.4 423,143 - +0.6 423,143 - -0.6 423,161 + -0.3 423,177 + -0.5 423,178 - -0.4 423,254 - +0.1 423,338 - CA264_01795 0.20 +0.7 423,390 - CA264_01795 0.36 +0.2 423,501 - CA264_01795 0.71 +0.1 423,624 - -0.7 423,635 + -0.9 423,635 + -1.0 423,636 - +0.2 423,636 - +0.7 423,673 + -1.1 423,673 + +0.3 423,673 + -0.2 423,685 + +0.9 423,686 - +0.8 423,686 - +0.3 423,696 + +0.9 423,708 + +0.3 423,708 + +1.7 423,708 + +0.3 423,709 - -0.0 423,712 + -0.2 423,712 + +1.0 423,713 - +3.4 423,713 - -0.1 423,723 - +0.8 423,755 - +0.2 423,822 - +0.6 423,849 + +0.3 424,104 + CA264_01800 0.24 -0.7 424,104 + CA264_01800 0.24 +0.1 424,104 + CA264_01800 0.24 -0.1 424,104 + CA264_01800 0.24 -0.0 424,104 + CA264_01800 0.24 +0.6 424,105 - CA264_01800 0.24 +0.2 424,105 - CA264_01800 0.24 +0.2 424,107 - CA264_01800 0.24 +0.1 424,232 + CA264_01800 0.32 -0.6 424,253 - CA264_01800 0.34 +1.7 424,341 + CA264_01800 0.40 -0.0 424,341 + CA264_01800 0.40 +0.4 424,380 - CA264_01800 0.42 -1.5 424,380 - CA264_01800 0.42 +0.3 424,407 - CA264_01800 0.44 -0.1 424,407 - CA264_01800 0.44 +0.6 424,420 + CA264_01800 0.45 -0.1 424,593 - CA264_01800 0.56 +0.3 424,677 - CA264_01800 0.62 -0.7 424,721 + CA264_01800 0.65 -0.3 424,722 - CA264_01800 0.65 -0.5 424,853 + CA264_01800 0.73 +0.8 424,854 - CA264_01800 0.73 -0.5 424,854 - CA264_01800 0.73 +0.4 425,090 + CA264_01800 0.89 +0.2 425,091 - CA264_01800 0.89 +0.8 425,091 - CA264_01800 0.89 -0.1 425,091 - CA264_01800 0.89 +0.1 425,091 - CA264_01800 0.89 -2.2 425,091 - CA264_01800 0.89 +1.0 425,183 + +0.8 425,184 - +2.0 425,196 - +1.4 425,258 + +0.6 425,258 + -0.1 425,258 + -0.2 425,259 - -0.2 425,259 - +0.5 425,259 - +1.0 425,259 - +1.6 425,262 + +0.3 425,262 + +0.3 425,263 - +0.9 425,263 - +0.4 425,265 - -1.3 425,268 + +0.5 425,268 - +0.1 425,269 - +0.7 425,269 - -0.7 425,336 - +1.8 425,478 + CA264_01805 0.20 -0.5 425,550 - CA264_01805 0.28 +0.4 425,833 + CA264_01805 0.59 +1.1 425,878 - CA264_01805 0.64 +1.0 426,126 + +0.8 426,126 + +1.1 426,127 - -0.2 426,236 + -0.0 426,236 + +0.2 426,240 + +0.4
Or see this region's nucleotide sequence